Guide to the Human Genome
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Name: LOC100128253 Sequence: fasta or formatted (100aa) NCBI GI: 169204405
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0          8           1
 C cysteine            5.0          5           1
 D aspartate           4.0          4           1
 E glutamate           1.0          1           1
 F phenylalanine       3.0          3           1
 G glycine             7.0          7           1
 H histidine           6.0          6           1
 I isoleucine          3.0          3           1
 K lysine              1.0          1           1
 L leucine            15.0         15           3
 M methionine          1.0          1           1
 N asparagine          2.0          2           1
 P proline            11.0         11           1
 Q glutamine           5.0          5           1
 R arginine           11.0         11           2
 S serine              7.0          7           1
 T threonine           2.0          2           1
 V valine              3.0          3           1
 W tryptophan          3.0          3           1
 Y tyrosine            2.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
MON1B                 0.036   MON1 homolog B 
MYADM                 0.020   myeloid-associated differentiation marker 
MYADM                 0.020   myeloid-associated differentiation marker 
MYADM                 0.020   myeloid-associated differentiation marker 
MYADM                 0.020   myeloid-associated differentiation marker 
MYADM                 0.020   myeloid-associated differentiation marker 
LOC100291637          0.005   PREDICTED: hypothetical protein XP_002346335 
LOC100289469          0.005   PREDICTED: hypothetical protein 
LOC100289469          0.005   PREDICTED: hypothetical protein XP_002343853 
TRIM64                0.005   tripartite motif-containing 64 
LOC642446             0.005   PREDICTED: tripartite motif-containing protein 64B-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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