Search of human proteins with 169168530

Search of human proteins with 169168530

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169168530 PREDICTED: hypothetical protein [Homo sapiens]
         (114 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169169698 PREDICTED: hypothetical protein [Homo sapiens]           242   4e-65
gi|169168530 PREDICTED: hypothetical protein [Homo sapiens]           242   4e-65
gi|169169377 PREDICTED: hypothetical protein [Homo sapiens]           242   4e-65
gi|32455271 protein-O-mannosyltransferase 2 [Homo sapiens]             30   0.41 
gi|150456444 hypothetical protein LOC57578 [Homo sapiens]              27   2.7  

>gi|169169698 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 114

 Score =  242 bits (618), Expect = 4e-65
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MQIQNNLFFCCYTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEILVTLSQVIISPA 60
           MQIQNNLFFCCYTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEILVTLSQVIISPA
Sbjct: 1   MQIQNNLFFCCYTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEILVTLSQVIISPA 60

Query: 61  GPHALTWTTHFSPSVIIILVPCWWHAVIVTQHPVANCYVTNHLNIQWLELKAGS 114
           GPHALTWTTHFSPSVIIILVPCWWHAVIVTQHPVANCYVTNHLNIQWLELKAGS
Sbjct: 61  GPHALTWTTHFSPSVIIILVPCWWHAVIVTQHPVANCYVTNHLNIQWLELKAGS 114


>gi|169168530 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 114

 Score =  242 bits (618), Expect = 4e-65
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MQIQNNLFFCCYTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEILVTLSQVIISPA 60
           MQIQNNLFFCCYTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEILVTLSQVIISPA
Sbjct: 1   MQIQNNLFFCCYTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEILVTLSQVIISPA 60

Query: 61  GPHALTWTTHFSPSVIIILVPCWWHAVIVTQHPVANCYVTNHLNIQWLELKAGS 114
           GPHALTWTTHFSPSVIIILVPCWWHAVIVTQHPVANCYVTNHLNIQWLELKAGS
Sbjct: 61  GPHALTWTTHFSPSVIIILVPCWWHAVIVTQHPVANCYVTNHLNIQWLELKAGS 114


>gi|169169377 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 114

 Score =  242 bits (618), Expect = 4e-65
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MQIQNNLFFCCYTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEILVTLSQVIISPA 60
           MQIQNNLFFCCYTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEILVTLSQVIISPA
Sbjct: 1   MQIQNNLFFCCYTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEILVTLSQVIISPA 60

Query: 61  GPHALTWTTHFSPSVIIILVPCWWHAVIVTQHPVANCYVTNHLNIQWLELKAGS 114
           GPHALTWTTHFSPSVIIILVPCWWHAVIVTQHPVANCYVTNHLNIQWLELKAGS
Sbjct: 61  GPHALTWTTHFSPSVIIILVPCWWHAVIVTQHPVANCYVTNHLNIQWLELKAGS 114


>gi|32455271 protein-O-mannosyltransferase 2 [Homo sapiens]
          Length = 750

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 5   NNLFFCCYTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEI---LVTLSQVIISPAG 61
           N+  F  Y + + +  WL L S+ AL  L G+  + +    A +   +  LSQV++   G
Sbjct: 583 NDTDFRVYLLGNPVVWWLNLLSI-ALYLLSGSIIAVAMQRGARLPAEVAGLSQVLLRGGG 641

Query: 62  PHALTWTTHFSP 73
              L WT H+ P
Sbjct: 642 QVLLGWTLHYFP 653


>gi|150456444 hypothetical protein LOC57578 [Homo sapiens]
          Length = 2458

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 12   YTVMSAIFKWLLLYSLPALCFLLGTQESESFHSKAEILVTLSQVI 56
            + + +A+F    L  L  LC+   T+E + F+    +++ L Q +
Sbjct: 2049 FVIQNAVFTLAYLVELCGLCYRAFTKERDKFYLSRSVVLELLQAL 2093


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.328    0.136    0.464 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,286,999
Number of Sequences: 37866
Number of extensions: 159633
Number of successful extensions: 393
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 389
Number of HSP's gapped (non-prelim): 5
length of query: 114
length of database: 18,247,518
effective HSP length: 84
effective length of query: 30
effective length of database: 15,066,774
effective search space: 452003220
effective search space used: 452003220
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.