Search of human proteins with 168229159

Search of human proteins with 168229159

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|168229159 bone marrow stromal cell antigen 1 precursor [Homo
sapiens]
         (318 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|168229159 bone marrow stromal cell antigen 1 precursor [Homo ...   650   0.0  
gi|38454326 CD38 antigen [Homo sapiens]                               188   5e-48
gi|112382370 folate receptor 3 precursor [Homo sapiens]                32   0.75 
gi|239745542 PREDICTED: similar to hCG1793095 [Homo sapiens]           30   2.8  
gi|19923665 BRI3-binding protein [Homo sapiens]                        29   6.3  

>gi|168229159 bone marrow stromal cell antigen 1 precursor [Homo
           sapiens]
          Length = 318

 Score =  650 bits (1678), Expect = 0.0
 Identities = 318/318 (100%), Positives = 318/318 (100%)

Query: 1   MAAQGCAASRLLQLLLQLLLLLLLLAAGGARARWRGEGTSAHLRDIFLGRCAEYRALLSP 60
           MAAQGCAASRLLQLLLQLLLLLLLLAAGGARARWRGEGTSAHLRDIFLGRCAEYRALLSP
Sbjct: 1   MAAQGCAASRLLQLLLQLLLLLLLLAAGGARARWRGEGTSAHLRDIFLGRCAEYRALLSP 60

Query: 61  EQRNKNCTAIWEAFKVALDKDPCSVLPSDYDLFINLSRHSIPRDKSLFWENSHLLVNSFA 120
           EQRNKNCTAIWEAFKVALDKDPCSVLPSDYDLFINLSRHSIPRDKSLFWENSHLLVNSFA
Sbjct: 61  EQRNKNCTAIWEAFKVALDKDPCSVLPSDYDLFINLSRHSIPRDKSLFWENSHLLVNSFA 120

Query: 121 DNTRRFMPLSDVLYGRVADFLSWCRQKNDSGLDYQSCPTSEDCENNPVDSFWKRASIQYS 180
           DNTRRFMPLSDVLYGRVADFLSWCRQKNDSGLDYQSCPTSEDCENNPVDSFWKRASIQYS
Sbjct: 121 DNTRRFMPLSDVLYGRVADFLSWCRQKNDSGLDYQSCPTSEDCENNPVDSFWKRASIQYS 180

Query: 181 KDSSGVIHVMLNGSEPTGAYPIKGFFADYEIPNLQKEKITRIEIWVMHEIGGPNVESCGE 240
           KDSSGVIHVMLNGSEPTGAYPIKGFFADYEIPNLQKEKITRIEIWVMHEIGGPNVESCGE
Sbjct: 181 KDSSGVIHVMLNGSEPTGAYPIKGFFADYEIPNLQKEKITRIEIWVMHEIGGPNVESCGE 240

Query: 241 GSMKVLEKRLKDMGFQYSCINDYRPVKLLQCVDHSTHPDCALKSAAAATQRKAPSLYTEQ 300
           GSMKVLEKRLKDMGFQYSCINDYRPVKLLQCVDHSTHPDCALKSAAAATQRKAPSLYTEQ
Sbjct: 241 GSMKVLEKRLKDMGFQYSCINDYRPVKLLQCVDHSTHPDCALKSAAAATQRKAPSLYTEQ 300

Query: 301 RAGLIIPLFLVLASRTQL 318
           RAGLIIPLFLVLASRTQL
Sbjct: 301 RAGLIIPLFLVLASRTQL 318


>gi|38454326 CD38 antigen [Homo sapiens]
          Length = 300

 Score =  188 bits (478), Expect = 5e-48
 Identities = 103/283 (36%), Positives = 151/283 (53%), Gaps = 10/283 (3%)

Query: 6   CAASRLLQLLLQLLLLLLLLAAGGA------RARWRGEGTSAHLRDIFLGRCAEYRALLS 59
           C  SR  QL L + +L+L+L    A      R +W G GT+    +  L RC +Y  +  
Sbjct: 16  CRLSRRAQLCLGVSILVLILVVVLAVVVPRWRQQWSGPGTTKRFPETVLARCVKYTEI-H 74

Query: 60  PEQRNKNCTAIWEAFKVA-LDKDPCSVLPSDYDLFINLSRHSIPRDKSLFWENSHLLVNS 118
           PE R+ +C ++W+AFK A + K PC++   DY   + L   ++P +K L W     L + 
Sbjct: 75  PEMRHVDCQSVWDAFKGAFISKHPCNITEEDYQPLMKLGTQTVPCNKILLWSRIKDLAHQ 134

Query: 119 FADNTRRFMPLSDVLYGRVADFLSWCRQKNDSGLDYQSCPT-SEDCENNPVDSFWKRASI 177
           F    R    L D L G +AD L+WC + N S ++YQSCP   +DC NNPV  FWK  S 
Sbjct: 135 FTQVQRDMFTLEDTLLGYLADDLTWCGEFNTSKINYQSCPDWRKDCSNNPVSVFWKTVSR 194

Query: 178 QYSKDSSGVIHVMLNGSEPTGAYPIKGFFADYEIPNLQKEKITRIEIWVMHEIGGPNVES 237
           ++++ +  V+HVMLNGS  +  +     F   E+ NLQ EK+  +E WV+H     + + 
Sbjct: 195 RFAEAACDVVHVMLNGSR-SKIFDKNSTFGSVEVHNLQPEKVQTLEAWVIHGGREDSRDL 253

Query: 238 CGEGSMKVLEKRLKDMGFQYSCINDYRPVKLLQCVDHSTHPDC 280
           C + ++K LE  +     Q+SC N YRP K LQCV +     C
Sbjct: 254 CQDPTIKELESIISKRNIQFSCKNIYRPDKFLQCVKNPEDSSC 296


>gi|112382370 folate receptor 3 precursor [Homo sapiens]
          Length = 245

 Score = 32.0 bits (71), Expect = 0.75
 Identities = 52/245 (21%), Positives = 88/245 (35%), Gaps = 50/245 (20%)

Query: 15  LLQLLLLLLLLAAGGARARWRGEGTSAHLRDIFLGRC---AEYRALLSPEQRNKNCTAIW 71
           ++QLLLL L+ AAG A+ R      SA  R   L  C     ++   SPE       + W
Sbjct: 7   MMQLLLLALVTAAGSAQPR------SARARTDLLNVCMNAKHHKTQPSPEDELYGQCSPW 60

Query: 72  EAFKVALDKDPCSVLPSDYDLFINLSRHSIPRDKSLFWENSHLLVNSFADNTRRFMPLSD 131
           +       K+ C    +  +L  + SR       +  W++            +R      
Sbjct: 61  K-------KNACCTASTSQELHKDTSRL-----YNFNWDH----CGKMEPTCKRHFIQDS 104

Query: 132 VLYGRVADFLSWCRQKNDSGLD----------------YQSCPTSEDCENNPVDSFWKRA 175
            LY    +   W RQ N S                   ++ C TS  C++N     W + 
Sbjct: 105 CLYECSPNLGPWIRQVNQSWRKERILNVPLCKEDCERWWEDCRTSYTCKSN-----WHKG 159

Query: 176 ---SIQYSKDSSGVIHVMLNGSEPTGAYPIKGFFA-DYEIPNLQKEKITRIEIWVMHEIG 231
              +   ++  +G +        PT A   +G ++  +++ N  +     I++W     G
Sbjct: 160 WNWTSGINECPAGALCSTFESYFPTPAALCEGLWSHSFKVSNYSRGSGRCIQMWFDSAQG 219

Query: 232 GPNVE 236
            PN E
Sbjct: 220 NPNEE 224


>gi|239745542 PREDICTED: similar to hCG1793095 [Homo sapiens]
          Length = 148

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 140 FLSWCRQKNDSGLDYQSCPTSEDCENNPVDSFWKRASIQYSKDSSGVIHVMLNG--SEPT 197
           ++SW  Q    GL++ S  +S  C  N  DS   R +I  + +S   +++ +N    E T
Sbjct: 52  YMSWIHQAPGKGLEWVSYISSSGCSTNYADSVKGRFTIS-TDNSKNTLYLQMNSLRVEDT 110

Query: 198 GAY 200
             Y
Sbjct: 111 AVY 113


>gi|19923665 BRI3-binding protein [Homo sapiens]
          Length = 251

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 20/35 (57%), Positives = 21/35 (60%)

Query: 2  AAQGCAASRLLQLLLQLLLLLLLLAAGGARARWRG 36
          A+ G  A   L LLL LLLLL LLA G   AR RG
Sbjct: 5  ASGGPLARAGLLLLLLLLLLLGLLAPGAQGARGRG 39


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,671,757
Number of Sequences: 37866
Number of extensions: 585216
Number of successful extensions: 1274
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1261
Number of HSP's gapped (non-prelim): 6
length of query: 318
length of database: 18,247,518
effective HSP length: 102
effective length of query: 216
effective length of database: 14,385,186
effective search space: 3107200176
effective search space used: 3107200176
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.