Search of human proteins with 157168362

Search of human proteins with 157168362

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157168362 nucleoside phosphorylase [Homo sapiens]
         (289 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157168362 nucleoside phosphorylase [Homo sapiens]                  590   e-169
gi|47132622 5'-methylthioadenosine phosphorylase [Homo sapiens]        72   7e-13
gi|239743841 PREDICTED: hypothetical protein XP_002342966 [Homo ...    28   7.2  
gi|51972258 ets variant 3-like [Homo sapiens]                          28   7.2  
gi|239746020 PREDICTED: hypothetical protein XP_002344182 [Homo ...    28   9.4  

>gi|157168362 nucleoside phosphorylase [Homo sapiens]
          Length = 289

 Score =  590 bits (1522), Expect = e-169
 Identities = 289/289 (100%), Positives = 289/289 (100%)

Query: 1   MENGYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRST 60
           MENGYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRST
Sbjct: 1   MENGYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLGGLTDKLTQAQIFDYGEIPNFPRST 60

Query: 61  VPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGL 120
           VPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGL
Sbjct: 61  VPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLLGVDTLVVTNAAGGL 120

Query: 121 NPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQ 180
           NPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQ
Sbjct: 121 NPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQ 180

Query: 181 MGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSL 240
           MGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSL
Sbjct: 181 MGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSL 240

Query: 241 ITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMASIPLPDKAS 289
           ITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMASIPLPDKAS
Sbjct: 241 ITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMASIPLPDKAS 289


>gi|47132622 5'-methylthioadenosine phosphorylase [Homo sapiens]
          Length = 283

 Score = 71.6 bits (174), Expect = 7e-13
 Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 14/221 (6%)

Query: 68  LVFGFLNGRACVMMQGRFHMYEGYPLWKVTFPVRVFHLL--GVDTLVVTNAAGGLNPKFE 125
           L+ G +    CV++      +   P  KV +   ++ L   G   ++VT A G L  + +
Sbjct: 45  LILGKIKNVDCVLLARHGRQHTIMPS-KVNYQANIWALKEEGCTHVIVTTACGSLREEIQ 103

Query: 126 VGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGEQR 185
            GDI++I   I+      Q+   G +    G     M++ +    R+  + T K++G  R
Sbjct: 104 PGDIVIIDQFIDRTTMRPQSFYDGSHSCARGVCHIPMAEPFCPKTREVLIETAKKLG-LR 162

Query: 186 ELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKV 245
              +GT V + GP F + AE  + +  GAD + M+TVPEV++A+  G+     ++ T   
Sbjct: 163 CHSKGTMVTIEGPRFSSRAESFMFRTWGADVINMTTVPEVVLAKEAGICYASIAMAT--- 219

Query: 246 IMDYESLEKANHEEVLAAG---KQAAQKLEQFVSILMASIP 283
             DY+  ++  HEE ++     K   +   +  S+L+ +IP
Sbjct: 220 --DYDCWKE--HEEAVSVDRVLKTLKENANKAKSLLLTTIP 256


>gi|239743841 PREDICTED: hypothetical protein XP_002342966 [Homo
           sapiens]
          Length = 601

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)

Query: 2   ENGYTYEDYKNTAEWLLSHTKH 23
           EN Y +E+Y     W LS TKH
Sbjct: 306 ENPYKFEEYGKAFYWFLSFTKH 327


>gi|51972258 ets variant 3-like [Homo sapiens]
          Length = 361

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 2/76 (2%)

Query: 91  YPLWKVTFPVRVFHLLGVDTLVVTNAAGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGP 150
           YPLW+V  P     LLG   L    A   +  + E+   ML      +   +GQ   RGP
Sbjct: 129 YPLWEVRAPPSPHLLLGAPAL-CRPALVPVGVQSELLHSMLFAHQAMVEQLTGQQTPRGP 187

Query: 151 NDERFGDRFPAMSDAY 166
             E  GD+  + S  Y
Sbjct: 188 -PETSGDKKGSSSSVY 202


>gi|239746020 PREDICTED: hypothetical protein XP_002344182 [Homo
           sapiens]
          Length = 162

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 204 AECRVLQKLGADAVGMSTVPEVIVARHCGL 233
           AE  V+++L  DAVG+  +   +V R CG+
Sbjct: 95  AEADVIERLVVDAVGLVCILHQLVHRQCGI 124


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.138    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,779,040
Number of Sequences: 37866
Number of extensions: 448982
Number of successful extensions: 1104
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1099
Number of HSP's gapped (non-prelim): 5
length of query: 289
length of database: 18,247,518
effective HSP length: 101
effective length of query: 188
effective length of database: 14,423,052
effective search space: 2711533776
effective search space used: 2711533776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.