Search of human proteins with 154759245

Search of human proteins with 154759245

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|154759245 testis/prostate/placenta-expressed protein isoform
2 [Homo sapiens]
         (271 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|154759245 testis/prostate/placenta-expressed protein isoform ...   573   e-164
gi|154759247 testis/prostate/placenta-expressed protein isoform ...   558   e-159
gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens]      30   2.2  
gi|32698686 N-acetylgalactosaminyltransferase 5 [Homo sapiens]         29   5.0  

>gi|154759245 testis/prostate/placenta-expressed protein isoform 2
           [Homo sapiens]
          Length = 271

 Score =  573 bits (1477), Expect = e-164
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MGIVCAQCSFILLLSIIRARPPPFLFCPLSSQRTESPYKPVHLGLGPTDKVAAIAMARII 60
           MGIVCAQCSFILLLSIIRARPPPFLFCPLSSQRTESPYKPVHLGLGPTDKVAAIAMARII
Sbjct: 1   MGIVCAQCSFILLLSIIRARPPPFLFCPLSSQRTESPYKPVHLGLGPTDKVAAIAMARII 60

Query: 61  DLVPWDDGSTHVYASPAILLPMERQRNQLAGVKQQLYHPALPTLRHMDRDTVKACLPDEH 120
           DLVPWDDGSTHVYASPAILLPMERQRNQLAGVKQQLYHPALPTLRHMDRDTVKACLPDEH
Sbjct: 61  DLVPWDDGSTHVYASPAILLPMERQRNQLAGVKQQLYHPALPTLRHMDRDTVKACLPDEH 120

Query: 121 CQSTTYCRKDEFDNAHFTLLGVPNKPLQCLDITATGQKLRNRYHEGKLAPIAPGINRVDW 180
           CQSTTYCRKDEFDNAHFTLLGVPNKPLQCLDITATGQKLRNRYHEGKLAPIAPGINRVDW
Sbjct: 121 CQSTTYCRKDEFDNAHFTLLGVPNKPLQCLDITATGQKLRNRYHEGKLAPIAPGINRVDW 180

Query: 181 PCFTRAIEDWSHFVSSAGEFKLPCLRKRAEGLSGYAVRYLKPDVTQTWRYCLSQNPSLDR 240
           PCFTRAIEDWSHFVSSAGEFKLPCLRKRAEGLSGYAVRYLKPDVTQTWRYCLSQNPSLDR
Sbjct: 181 PCFTRAIEDWSHFVSSAGEFKLPCLRKRAEGLSGYAVRYLKPDVTQTWRYCLSQNPSLDR 240

Query: 241 YGQKPLPFDSLNTFRSFGSSYSRVNYLTPWH 271
           YGQKPLPFDSLNTFRSFGSSYSRVNYLTPWH
Sbjct: 241 YGQKPLPFDSLNTFRSFGSSYSRVNYLTPWH 271


>gi|154759247 testis/prostate/placenta-expressed protein isoform 1
           [Homo sapiens]
          Length = 298

 Score =  558 bits (1439), Expect = e-159
 Identities = 271/298 (90%), Positives = 271/298 (90%), Gaps = 27/298 (9%)

Query: 1   MGIVCAQCSFILLLSIIRARPPPFLFCPLSSQRTESPYKPVHLGLGPTDKVAAIAMARII 60
           MGIVCAQCSFILLLSIIRARPPPFLFCPLSSQRTESPYKPVHLGLGPTDKVAAIAMARII
Sbjct: 1   MGIVCAQCSFILLLSIIRARPPPFLFCPLSSQRTESPYKPVHLGLGPTDKVAAIAMARII 60

Query: 61  DLVPWDDGSTHVYASPAILLPMERQRNQLAGVKQQLYHPALPTLRHMDRDTVKACLPDEH 120
           DLVPWDDGSTHVYASPAILLPMERQRNQLAGVKQQLYHPALPTLRHMDRDTVKACLPDEH
Sbjct: 61  DLVPWDDGSTHVYASPAILLPMERQRNQLAGVKQQLYHPALPTLRHMDRDTVKACLPDEH 120

Query: 121 CQSTTYCRKDEFDNAHFTLLGVPNKPLQCLDITATGQKLRNRYHEGKLAPIAPGINRVDW 180
           CQSTTYCRKDEFDNAHFTLLGVPNKPLQCLDITATGQKLRNRYHEGKLAPIAPGINRVDW
Sbjct: 121 CQSTTYCRKDEFDNAHFTLLGVPNKPLQCLDITATGQKLRNRYHEGKLAPIAPGINRVDW 180

Query: 181 PCFTRAIEDWSHFVSSAGEFKLPCLRKRAEGLSGYAVRYLKPDVTQTWR----------- 229
           PCFTRAIEDWSHFVSSAGEFKLPCLRKRAEGLSGYAVRYLKPDVTQTWR           
Sbjct: 181 PCFTRAIEDWSHFVSSAGEFKLPCLRKRAEGLSGYAVRYLKPDVTQTWRQEALCGAWAGR 240

Query: 230 ----------------YCLSQNPSLDRYGQKPLPFDSLNTFRSFGSSYSRVNYLTPWH 271
                           YCLSQNPSLDRYGQKPLPFDSLNTFRSFGSSYSRVNYLTPWH
Sbjct: 241 PCSPDSPRPYPCCPPQYCLSQNPSLDRYGQKPLPFDSLNTFRSFGSSYSRVNYLTPWH 298


>gi|194353966 dynein, axonemal, heavy polypeptide 6 [Homo sapiens]
          Length = 4158

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)

Query: 236  PSLDRYGQKPLPFDSLNTFRSFGSSYSR 263
            P LDRYG +P P + L  ++ FG  Y R
Sbjct: 2169 PRLDRYGSQP-PIELLRQYQDFGGFYDR 2195


>gi|32698686 N-acetylgalactosaminyltransferase 5 [Homo sapiens]
          Length = 940

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%)

Query: 65  WDDGSTHVYASPAILLPMERQRNQLAGVKQQLYHPALPTLRHMDRDTVKACLPDE 119
           W +G+ +VY S  I +    +  + AG  +QL H  LPT       +V  C  DE
Sbjct: 459 WKEGNFNVYLSDLIPVDRAIEDTRPAGCAEQLVHNNLPT------TSVIMCFVDE 507


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.138    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,564,341
Number of Sequences: 37866
Number of extensions: 534462
Number of successful extensions: 902
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 898
Number of HSP's gapped (non-prelim): 4
length of query: 271
length of database: 18,247,518
effective HSP length: 101
effective length of query: 170
effective length of database: 14,423,052
effective search space: 2451918840
effective search space used: 2451918840
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.