Search of human proteins with 109948302

Search of human proteins with 109948302

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|109948302 transmembrane protein 97 [Homo sapiens]
         (176 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|109948302 transmembrane protein 97 [Homo sapiens]                  365   e-101
gi|222136596 transmembrane 6 superfamily member 1 isoform 1 [Hom...    36   0.020
gi|112181177 transmembrane 6 superfamily member 2 [Homo sapiens]       33   0.098
gi|85986601 relaxin/insulin-like family peptide receptor 1 [Homo...    29   1.8  
gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]             29   2.4  
gi|147900821 stromal cell derived factor receptor 2 homolog [Hom...    28   4.1  
gi|4758816 N-myristoyltransferase 2 [Homo sapiens]                     27   9.2  

>gi|109948302 transmembrane protein 97 [Homo sapiens]
          Length = 176

 Score =  365 bits (937), Expect = e-101
 Identities = 176/176 (100%), Positives = 176/176 (100%)

Query: 1   MGAPATRRCVEWLLGLYFLSHIPITLFMDLQAVLPRELYPVEFRNLLKWYAKEFKDPLLQ 60
           MGAPATRRCVEWLLGLYFLSHIPITLFMDLQAVLPRELYPVEFRNLLKWYAKEFKDPLLQ
Sbjct: 1   MGAPATRRCVEWLLGLYFLSHIPITLFMDLQAVLPRELYPVEFRNLLKWYAKEFKDPLLQ 60

Query: 61  EPPAWFKSFLFCELVFQLPFFPIATYAFLKGSCKWIRTPAIIYSVHTMTTLIPILSTFLF 120
           EPPAWFKSFLFCELVFQLPFFPIATYAFLKGSCKWIRTPAIIYSVHTMTTLIPILSTFLF
Sbjct: 61  EPPAWFKSFLFCELVFQLPFFPIATYAFLKGSCKWIRTPAIIYSVHTMTTLIPILSTFLF 120

Query: 121 EDFSKASGFKGQRPETLHERLTLVSVYAPYLLIPFILLIFMLRSPYYKYEEKRKKK 176
           EDFSKASGFKGQRPETLHERLTLVSVYAPYLLIPFILLIFMLRSPYYKYEEKRKKK
Sbjct: 121 EDFSKASGFKGQRPETLHERLTLVSVYAPYLLIPFILLIFMLRSPYYKYEEKRKKK 176


>gi|222136596 transmembrane 6 superfamily member 1 isoform 1 [Homo
           sapiens]
          Length = 370

 Score = 35.8 bits (81), Expect = 0.020
 Identities = 13/52 (25%), Positives = 29/52 (55%)

Query: 53  EFKDPLLQEPPAWFKSFLFCELVFQLPFFPIATYAFLKGSCKWIRTPAIIYS 104
           +F++P L++P A+ K  +   + + +P+F  A Y  +   C W+    +I++
Sbjct: 251 QFQEPYLKDPAAYPKIQMLAYMFYSVPYFVTALYGLVVPGCSWMPDITLIHA 302


>gi|112181177 transmembrane 6 superfamily member 2 [Homo sapiens]
          Length = 377

 Score = 33.5 bits (75), Expect = 0.098
 Identities = 14/49 (28%), Positives = 27/49 (55%)

Query: 56  DPLLQEPPAWFKSFLFCELVFQLPFFPIATYAFLKGSCKWIRTPAIIYS 104
           +P L++P A+ K  +   + + LPF  +A YA     C W+   A++++
Sbjct: 255 EPYLRDPVAYPKVQMLMYMFYVLPFCGLAAYALTFPGCSWLPDWALVFA 303


>gi|85986601 relaxin/insulin-like family peptide receptor 1 [Homo
           sapiens]
          Length = 757

 Score = 29.3 bits (64), Expect = 1.8
 Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 91  GSCKWIRTPAIIYSVHTMTTLIPILSTFLFEDFSKASG----FKGQRPETLHERLTLVSV 146
           G C+ I    +I+    +   IP+ +   F+++   +G       +  E++  ++  V++
Sbjct: 524 GKCRTITVLILIWITGFIVAFIPLSNKEFFKNYYGTNGVCFPLHSEDTESIGAQIYSVAI 583

Query: 147 YAPYLLIPFILLIFMLRSPYYKYEE 171
           +    L  FI+++F   S +Y   +
Sbjct: 584 FLGINLAAFIIIVFSYGSMFYSVHQ 608


>gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]
          Length = 698

 Score = 28.9 bits (63), Expect = 2.4
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 15/78 (19%)

Query: 45  NLLKWYAKEFKDPLLQEPPAWFKSFLFC-------------ELVFQLPFFPIATYAFLKG 91
           +LLK Y +E  +P++  P A ++ FL C             EL  Q+   P A Y  L+ 
Sbjct: 229 SLLKLYLRELPEPVV--PFARYEDFLSCAQLLTKDEGEGTLELAKQVSNLPQANYNLLRY 286

Query: 92  SCKWIRTPAIIYSVHTMT 109
            CK++       +V+ M+
Sbjct: 287 ICKFLDEVQAYSNVNKMS 304


>gi|147900821 stromal cell derived factor receptor 2 homolog [Homo
           sapiens]
          Length = 626

 Score = 28.1 bits (61), Expect = 4.1
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 5/95 (5%)

Query: 64  AWFKSFLFCELVFQLPFFPIATYAFLKGSCKWIRTPAIIYSVHTMTTLIPILSTFLFE-D 122
           AW  +     LV +  F P+ + AFL G   W +   ++    T+ T I  +  F++   
Sbjct: 380 AWMTTVSIGVLVARF-FKPVWSKAFLLGEAAWFQVHRMLMFTTTVLTCIAFVMPFIYRGG 438

Query: 123 FSKASGFK---GQRPETLHERLTLVSVYAPYLLIP 154
           +S+ +G+    G    TL     L++V+ P L  P
Sbjct: 439 WSRHAGYHPYLGCIVMTLAVLQPLLAVFRPPLHDP 473


>gi|4758816 N-myristoyltransferase 2 [Homo sapiens]
          Length = 498

 Score = 26.9 bits (58), Expect = 9.2
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 18/120 (15%)

Query: 24  ITLFMDLQAVLPRELYPVEFRNLLKWYAKEFK-DPLLQEPPA--WF--KSFLFCELVFQL 78
           +T    L+ + P+++  V  R L+  Y K+F   P++ E     WF  +  +    V + 
Sbjct: 334 VTKTSGLRPMEPKDIKSV--RELINTYLKQFHLAPVMDEEEVAHWFLPREHIIDTFVVES 391

Query: 79  P---------FFPIATYAFLKGSCKWIRTPAIIYSVHTMTTLIPILSTFLFEDFSKASGF 129
           P         F+ + +      + K ++     Y++HT T L+ ++S  L    +K+ GF
Sbjct: 392 PNGKLTDFLSFYTLPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMSDALI--LAKSKGF 449


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.330    0.145    0.467 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,102,177
Number of Sequences: 37866
Number of extensions: 294349
Number of successful extensions: 617
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 614
Number of HSP's gapped (non-prelim): 7
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.