Guide to the Human Genome
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Search of human proteins with 8670536

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8670536 8-oxoguanine DNA-glycosylase 1 isoform 2b [Homo
sapiens]
         (357 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8670536 8-oxoguanine DNA-glycosylase 1 isoform 2b [Homo sapiens]   738   0.0  
gi|8670534 8-oxoguanine DNA-glycosylase 1 isoform 2a [Homo sapiens]   510   e-145
gi|8670542 8-oxoguanine DNA-glycosylase 1 isoform 2e [Homo sapiens]   510   e-145
gi|8670540 8-oxoguanine DNA-glycosylase 1 isoform 2d [Homo sapiens]   510   e-145
gi|8670532 8-oxoguanine DNA-glycosylase 1 isoform 1c [Homo sapiens]   510   e-145
gi|8670530 8-oxoguanine DNA-glycosylase 1 isoform 1b [Homo sapiens]   510   e-145
gi|4505495 8-oxoguanine DNA-glycosylase 1 isoform 1a [Homo sapiens]   510   e-145
gi|8670538 8-oxoguanine DNA-glycosylase 1 isoform 2c [Homo sapiens]   395   e-110
gi|94966752 elongation factor Tu GTP binding domain containing 1...    31   1.9  
gi|94966754 elongation factor Tu GTP binding domain containing 1...    31   1.9  
gi|11034811 catenin (cadherin-associated protein), delta 2 (neur...    30   2.5  
gi|21630285 PDZ domain containing 3 [Homo sapiens]                     30   3.3  
gi|4826665 copper chaperone for superoxide dismutase [Homo sapiens]    30   4.3  
gi|27436996 potassium voltage-gated channel, subfamily G, member...    29   5.7  
gi|31377667 peroxisomal LON protease-like [Homo sapiens]               29   5.7  
gi|117422433 kallikrein-related peptidase 10 preproprotein [Homo...    28   9.7  
gi|22208984 kallikrein-related peptidase 10 preproprotein [Homo ...    28   9.7  
gi|22208982 kallikrein-related peptidase 10 preproprotein [Homo ...    28   9.7  

>gi|8670536 8-oxoguanine DNA-glycosylase 1 isoform 2b [Homo sapiens]
          Length = 357

 Score =  738 bits (1906), Expect = 0.0
 Identities = 357/357 (100%), Positives = 357/357 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTKGLLGNAFDGHQLLRPLIFCQDHLREGPPIGRGDSQGEELEPQLPSSLSSIP 300
           CILPGVGTKGLLGNAFDGHQLLRPLIFCQDHLREGPPIGRGDSQGEELEPQLPSSLSSIP
Sbjct: 241 CILPGVGTKGLLGNAFDGHQLLRPLIFCQDHLREGPPIGRGDSQGEELEPQLPSSLSSIP 300

Query: 301 YGFCDHCWTKDVDDPPLVTHPSPGSRDGHMTQAWPVKVVSPLATVIGHVMQASLLAL 357
           YGFCDHCWTKDVDDPPLVTHPSPGSRDGHMTQAWPVKVVSPLATVIGHVMQASLLAL
Sbjct: 301 YGFCDHCWTKDVDDPPLVTHPSPGSRDGHMTQAWPVKVVSPLATVIGHVMQASLLAL 357


>gi|8670534 8-oxoguanine DNA-glycosylase 1 isoform 2a [Homo sapiens]
          Length = 424

 Score =  510 bits (1314), Expect = e-145
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTK 249
           CILPGVGTK
Sbjct: 241 CILPGVGTK 249



 Score =  233 bits (593), Expect = 3e-61
 Identities = 109/113 (96%), Positives = 109/113 (96%)

Query: 245 GVGTKGLLGNAFDGHQLLRPLIFCQDHLREGPPIGRGDSQGEELEPQLPSSLSSIPYGFC 304
           G    GLLGNAFDGHQLLRPLIFCQDHLREGPPIGRGDSQGEELEPQLPSSLSSIPYGFC
Sbjct: 312 GWAQAGLLGNAFDGHQLLRPLIFCQDHLREGPPIGRGDSQGEELEPQLPSSLSSIPYGFC 371

Query: 305 DHCWTKDVDDPPLVTHPSPGSRDGHMTQAWPVKVVSPLATVIGHVMQASLLAL 357
           DHCWTKDVDDPPLVTHPSPGSRDGHMTQAWPVKVVSPLATVIGHVMQASLLAL
Sbjct: 372 DHCWTKDVDDPPLVTHPSPGSRDGHMTQAWPVKVVSPLATVIGHVMQASLLAL 424


>gi|8670542 8-oxoguanine DNA-glycosylase 1 isoform 2e [Homo sapiens]
          Length = 322

 Score =  510 bits (1314), Expect = e-145
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTK 249
           CILPGVGTK
Sbjct: 241 CILPGVGTK 249


>gi|8670540 8-oxoguanine DNA-glycosylase 1 isoform 2d [Homo sapiens]
          Length = 356

 Score =  510 bits (1314), Expect = e-145
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTK 249
           CILPGVGTK
Sbjct: 241 CILPGVGTK 249


>gi|8670532 8-oxoguanine DNA-glycosylase 1 isoform 1c [Homo sapiens]
          Length = 410

 Score =  510 bits (1314), Expect = e-145
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTK 249
           CILPGVGTK
Sbjct: 241 CILPGVGTK 249


>gi|8670530 8-oxoguanine DNA-glycosylase 1 isoform 1b [Homo sapiens]
          Length = 324

 Score =  510 bits (1314), Expect = e-145
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTK 249
           CILPGVGTK
Sbjct: 241 CILPGVGTK 249


>gi|4505495 8-oxoguanine DNA-glycosylase 1 isoform 1a [Homo sapiens]
          Length = 345

 Score =  510 bits (1314), Expect = e-145
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240
           FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL
Sbjct: 181 FPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKAL 240

Query: 241 CILPGVGTK 249
           CILPGVGTK
Sbjct: 241 CILPGVGTK 249


>gi|8670538 8-oxoguanine DNA-glycosylase 1 isoform 2c [Homo sapiens]
          Length = 195

 Score =  395 bits (1015), Expect = e-110
 Identities = 190/190 (100%), Positives = 190/190 (100%)

Query: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60
           MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA
Sbjct: 1   MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLA 60

Query: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120
           DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF
Sbjct: 61  DQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLYHHWGSVDSHF 120

Query: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180
           QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG
Sbjct: 121 QEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRLIQLDDVTYHG 180

Query: 181 FPSLQALAGP 190
           FPSLQALAGP
Sbjct: 181 FPSLQALAGP 190


>gi|94966752 elongation factor Tu GTP binding domain containing 1
            isoform 2 [Homo sapiens]
          Length = 1069

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 17/74 (22%)

Query: 38   VLPSGQSFRWREQ---------SP----AHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQ 84
            VLP  +SF + ++         SP    +HW  + +D  W  T  EE LH     G+K+ 
Sbjct: 976  VLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHF----GEKAD 1031

Query: 85   ASRPTPDELEAVRK 98
            +       + AVRK
Sbjct: 1032 SENQARKYMNAVRK 1045


>gi|94966754 elongation factor Tu GTP binding domain containing 1
            isoform 1 [Homo sapiens]
          Length = 1120

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 17/74 (22%)

Query: 38   VLPSGQSFRWREQ---------SP----AHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQ 84
            VLP  +SF + ++         SP    +HW  + +D  W  T  EE LH     G+K+ 
Sbjct: 1027 VLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHF----GEKAD 1082

Query: 85   ASRPTPDELEAVRK 98
            +       + AVRK
Sbjct: 1083 SENQARKYMNAVRK 1096


>gi|11034811 catenin (cadherin-associated protein), delta 2 (neural
           plakophilin-related arm-repeat protein) [Homo sapiens]
          Length = 1225

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)

Query: 168 PRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQ 227
           P L ++  +  H FPS+Q+ A     A+L+ L  G          +A +  QGG+  L  
Sbjct: 550 PELPEVIQMLQHQFPSVQSNAA----AYLQHLCFG------DNKIKAEIRRQGGIQLLVD 599

Query: 228 LRESSYEEAHKALC 241
           L +    E H++ C
Sbjct: 600 LLDHRMTEVHRSAC 613


>gi|21630285 PDZ domain containing 3 [Homo sapiens]
          Length = 491

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/45 (37%), Positives = 24/45 (53%)

Query: 157 GMVERLCQAFGPRLIQLDDVTYHGFPSLQALAGPEVEAHLRKLGL 201
           G  ER     G RL++++ +   G      +AGPEVE   R+LGL
Sbjct: 187 GAAERAGVPPGARLLEVNGLWQSGQQVTLLVAGPEVEEQCRQLGL 231


>gi|4826665 copper chaperone for superoxide dismutase [Homo sapiens]
          Length = 274

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 183 SLQALAG-PEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALC 241
           SLQ +AG  +VE HL    +       S   +A+LE  G  A L+ +     +    A+ 
Sbjct: 32  SLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMGSGQLQNLGAAVA 91

Query: 242 ILPGVGT 248
           IL G GT
Sbjct: 92  ILGGPGT 98


>gi|27436996 potassium voltage-gated channel, subfamily G, member 4
           [Homo sapiens]
          Length = 519

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 20/114 (17%)

Query: 202 GYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILPGVGTKGLLGNAFDGHQL 261
           G    +++A    +L+E   L++ ++L     EEAH   C L                +L
Sbjct: 121 GVIVSFLAAGKLVLLQEMCALSFQEELAYWGIEEAHLERCCL---------------RKL 165

Query: 262 LRPLIFCQDHLREGPPIGRGDSQGEELEPQLPSSLSSIPYGFCDHCWTKDVDDP 315
           LR L    + L E   + R D   ++ E + P+S SS  +G C +   + V++P
Sbjct: 166 LRKL----EELEELAKLHREDVLRQQRETRRPASHSS-RWGLCMNRLREMVENP 214


>gi|31377667 peroxisomal LON protease-like [Homo sapiens]
          Length = 852

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 185 QALAGPEVEAHLRKLGLGYRARYVSASARAILEEQGGLAWLQQLRESSYEEAHKALCILP 244
           Q L+ P V   L    LG    +V AS    ++ +G L    QL +   E AH A+  L 
Sbjct: 649 QRLSQPGVAIGLAWTPLGGEIMFVEASR---MDGEGQLTLTGQLGDVMKESAHLAISWLR 705

Query: 245 GVGTKGLLGNAFDGHQLL 262
               K  L NAF    LL
Sbjct: 706 SNAKKYQLTNAFGSFDLL 723


>gi|117422433 kallikrein-related peptidase 10 preproprotein [Homo
           sapiens]
          Length = 276

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 16/67 (23%)

Query: 27  PCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQAS 86
           PC R      + L +G SF        H +GVL DQ W LT      HC    G+K   +
Sbjct: 51  PCARGSQPWQVSLFNGLSF--------HCAGVLVDQSWVLTAA----HC----GNKPLWA 94

Query: 87  RPTPDEL 93
           R   D L
Sbjct: 95  RVGDDHL 101


>gi|22208984 kallikrein-related peptidase 10 preproprotein [Homo
           sapiens]
          Length = 276

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 16/67 (23%)

Query: 27  PCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQAS 86
           PC R      + L +G SF        H +GVL DQ W LT      HC    G+K   +
Sbjct: 51  PCARGSQPWQVSLFNGLSF--------HCAGVLVDQSWVLTAA----HC----GNKPLWA 94

Query: 87  RPTPDEL 93
           R   D L
Sbjct: 95  RVGDDHL 101


>gi|22208982 kallikrein-related peptidase 10 preproprotein [Homo
           sapiens]
          Length = 276

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 16/67 (23%)

Query: 27  PCPRSELRLDLVLPSGQSFRWREQSPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQAS 86
           PC R      + L +G SF        H +GVL DQ W LT      HC    G+K   +
Sbjct: 51  PCARGSQPWQVSLFNGLSF--------HCAGVLVDQSWVLTAA----HC----GNKPLWA 94

Query: 87  RPTPDEL 93
           R   D L
Sbjct: 95  RVGDDHL 101


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,728,651
Number of Sequences: 37866
Number of extensions: 788884
Number of successful extensions: 1656
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1646
Number of HSP's gapped (non-prelim): 19
length of query: 357
length of database: 18,247,518
effective HSP length: 103
effective length of query: 254
effective length of database: 14,347,320
effective search space: 3644219280
effective search space used: 3644219280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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