Search of human proteins with 73858575

Search of human proteins with 73858575

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|73858575 prenyl protein peptidase RCE1 isoform 2 [Homo
sapiens]
         (225 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|73858575 prenyl protein peptidase RCE1 isoform 2 [Homo sapiens]    464   e-131
gi|4826976 prenyl protein peptidase RCE1 isoform 1 [Homo sapiens]     464   e-131
gi|13699859 prostaglandin I2 (prostacyclin) synthase [Homo sapiens]    31   0.98 
gi|7330339 olfactory receptor, family 10, subfamily H, member 3 ...    28   8.3  

>gi|73858575 prenyl protein peptidase RCE1 isoform 2 [Homo sapiens]
          Length = 225

 Score =  464 bits (1195), Expect = e-131
 Identities = 225/225 (100%), Positives = 225/225 (100%)

Query: 1   MGFRLEGIFPAALLPLLLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRW 60
           MGFRLEGIFPAALLPLLLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRW
Sbjct: 1   MGFRLEGIFPAALLPLLLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRW 60

Query: 61  LRNQVIAPLTEELVFRACMLPMLAPCMGLGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVG 120
           LRNQVIAPLTEELVFRACMLPMLAPCMGLGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVG
Sbjct: 61  LRNQVIAPLTEELVFRACMLPMLAPCMGLGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVG 120

Query: 121 NIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEHPQRRPL 180
           NIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEHPQRRPL
Sbjct: 121 NIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEHPQRRPL 180

Query: 181 LAGYALGVGLFLLLLQPLTDPKLYGSLPLCVLLERAGDSEAPLCS 225
           LAGYALGVGLFLLLLQPLTDPKLYGSLPLCVLLERAGDSEAPLCS
Sbjct: 181 LAGYALGVGLFLLLLQPLTDPKLYGSLPLCVLLERAGDSEAPLCS 225


>gi|4826976 prenyl protein peptidase RCE1 isoform 1 [Homo sapiens]
          Length = 329

 Score =  464 bits (1195), Expect = e-131
 Identities = 225/225 (100%), Positives = 225/225 (100%)

Query: 1   MGFRLEGIFPAALLPLLLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRW 60
           MGFRLEGIFPAALLPLLLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRW
Sbjct: 105 MGFRLEGIFPAALLPLLLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRW 164

Query: 61  LRNQVIAPLTEELVFRACMLPMLAPCMGLGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVG 120
           LRNQVIAPLTEELVFRACMLPMLAPCMGLGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVG
Sbjct: 165 LRNQVIAPLTEELVFRACMLPMLAPCMGLGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVG 224

Query: 121 NIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEHPQRRPL 180
           NIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEHPQRRPL
Sbjct: 225 NIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFPAVCAALEHPQRRPL 284

Query: 181 LAGYALGVGLFLLLLQPLTDPKLYGSLPLCVLLERAGDSEAPLCS 225
           LAGYALGVGLFLLLLQPLTDPKLYGSLPLCVLLERAGDSEAPLCS
Sbjct: 285 LAGYALGVGLFLLLLQPLTDPKLYGSLPLCVLLERAGDSEAPLCS 329


>gi|13699859 prostaglandin I2 (prostacyclin) synthase [Homo sapiens]
          Length = 500

 Score = 30.8 bits (68), Expect = 0.98
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 9/91 (9%)

Query: 13  LLPLLLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRWLRNQVI----AP 68
           LLP L    L +G       D  C +   L  +L+P   AR     +WL + ++      
Sbjct: 213 LLPKLARGSLSVG-----DKDHMCSVKSRLWKLLSPARLARRAHRSKWLESYLLHLEEMG 267

Query: 69  LTEELVFRACMLPMLAPCMGLGPAVFTCPLF 99
           ++EE+  RA +L + A    +GPA F   LF
Sbjct: 268 VSEEMQARALVLQLWATQGNMGPAAFWLLLF 298


>gi|7330339 olfactory receptor, family 10, subfamily H, member 3
           [Homo sapiens]
          Length = 316

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 98  LFFGVAHFHHIIEQLRFRQSSVGNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCH 157
           + F VA    ++  L F   S+   F++ A Q  ++ +FG   +FL +  G+     +CH
Sbjct: 72  ILFTVAITPRMLADLLFTHRSI--TFVACAIQMFFSFMFGFTHSFLLMVMGYDHYVTICH 129

Query: 158 SF-CNYMGFPAVCAAL 172
               N +  P  CA L
Sbjct: 130 PLHYNMLMSPRGCAHL 145


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.333    0.147    0.483 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,791,619
Number of Sequences: 37866
Number of extensions: 373582
Number of successful extensions: 872
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 870
Number of HSP's gapped (non-prelim): 4
length of query: 225
length of database: 18,247,518
effective HSP length: 99
effective length of query: 126
effective length of database: 14,498,784
effective search space: 1826846784
effective search space used: 1826846784
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.