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Search of human proteins with 70778815
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|70778815 prolyl endopeptidase-like isoform C [Homo sapiens]
(727 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|70778815 prolyl endopeptidase-like isoform C [Homo sapiens] 1503 0.0
gi|108860692 prolyl endopeptidase-like isoform D [Homo sapiens] 796 0.0
gi|108860686 prolyl endopeptidase-like isoform E [Homo sapiens] 713 0.0
gi|41349456 prolyl endopeptidase [Homo sapiens] 100 5e-21
gi|24308223 hypothetical protein LOC57577 [Homo sapiens] 35 0.32
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 31 3.6
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 31 3.6
gi|116686122 kinesin family member 4 [Homo sapiens] 30 7.9
>gi|70778815 prolyl endopeptidase-like isoform C [Homo sapiens]
Length = 727
Score = 1503 bits (3890), Expect = 0.0
Identities = 727/727 (100%), Positives = 727/727 (100%)
Query: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60
MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE
Sbjct: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60
Query: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120
LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF
Sbjct: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120
Query: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180
VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE
Sbjct: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180
Query: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240
ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR
Sbjct: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240
Query: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300
NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL
Sbjct: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300
Query: 301 YYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHCV 360
YYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHCV
Sbjct: 301 YYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHCV 360
Query: 361 LFLKHSNLLYVNVIGLADDSVRSLKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTY 420
LFLKHSNLLYVNVIGLADDSVRSLKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTY
Sbjct: 361 LFLKHSNLLYVNVIGLADDSVRSLKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTY 420
Query: 421 KFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYG 480
KFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYG
Sbjct: 421 KFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYG 480
Query: 481 AYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIK 540
AYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIK
Sbjct: 481 AYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIK 540
Query: 541 TLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLT 600
TLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLT
Sbjct: 541 TLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLT 600
Query: 601 LEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKL 660
LEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKL
Sbjct: 601 LEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKL 660
Query: 661 KEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFED 720
KEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFED
Sbjct: 661 KEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFED 720
Query: 721 LKKYLKF 727
LKKYLKF
Sbjct: 721 LKKYLKF 727
>gi|108860692 prolyl endopeptidase-like isoform D [Homo sapiens]
Length = 661
Score = 796 bits (2055), Expect = 0.0
Identities = 385/385 (100%), Positives = 385/385 (100%)
Query: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60
MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE
Sbjct: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60
Query: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120
LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF
Sbjct: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120
Query: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180
VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE
Sbjct: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180
Query: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240
ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR
Sbjct: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240
Query: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300
NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL
Sbjct: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300
Query: 301 YYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHCV 360
YYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHCV
Sbjct: 301 YYVEHRDDELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKDHCV 360
Query: 361 LFLKHSNLLYVNVIGLADDSVRSLK 385
LFLKHSNLLYVNVIGLADDSVRSLK
Sbjct: 361 LFLKHSNLLYVNVIGLADDSVRSLK 385
Score = 571 bits (1471), Expect = e-162
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 451 KDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHVR 510
KDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHVR
Sbjct: 385 KDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHVR 444
Query: 511 GGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCN 570
GGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCN
Sbjct: 445 GGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCN 504
Query: 571 SNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK 630
SNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK
Sbjct: 505 SNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK 564
Query: 631 PQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNH 690
PQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNH
Sbjct: 565 PQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNH 624
Query: 691 VIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF 727
VIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF
Sbjct: 625 VIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF 661
>gi|108860686 prolyl endopeptidase-like isoform E [Homo sapiens]
Length = 665
Score = 713 bits (1840), Expect = 0.0
Identities = 343/343 (100%), Positives = 343/343 (100%)
Query: 385 KLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVL 444
KLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVL
Sbjct: 323 KLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVL 382
Query: 445 RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL 504
RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL
Sbjct: 383 RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL 442
Query: 505 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL 564
AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL
Sbjct: 443 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL 502
Query: 565 AGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC 624
AGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC
Sbjct: 503 AGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC 562
Query: 625 PYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDI 684
PYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDI
Sbjct: 563 PYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDI 622
Query: 685 QPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF 727
QPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF
Sbjct: 623 QPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF 665
Score = 673 bits (1737), Expect = 0.0
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60
MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE
Sbjct: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60
Query: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120
LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF
Sbjct: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120
Query: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180
VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE
Sbjct: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180
Query: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240
ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR
Sbjct: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240
Query: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300
NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL
Sbjct: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300
Query: 301 YYVEHRDDELYILTNVGEPTEFKL 324
YYVEHRDDELYILTNVGEPTEFKL
Sbjct: 301 YYVEHRDDELYILTNVGEPTEFKL 324
>gi|41349456 prolyl endopeptidase [Homo sapiens]
Length = 710
Score = 100 bits (249), Expect = 5e-21
Identities = 108/430 (25%), Positives = 185/430 (43%), Gaps = 46/430 (10%)
Query: 249 DPSYFVFLYLTKDSRFLTINIMN--KTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHR 306
+P + L+ D R++ ++I + +W D I G+L +V+
Sbjct: 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQE-------SSGIAGILKWVKLI 283
Query: 307 DD---ELYILTNVGEPTEFKLMRTAADTPAIMNWDLFFTMKRNTKVIDLDMFKD-----H 358
D+ E +TN G FK R + + ++N D + KV+ + KD
Sbjct: 284 DNFEGEYDYVTNEGTVFTFKTNRQSPNY-RVINIDFRDPEESKWKVLVPEHEKDVLEWIA 342
Query: 359 CVLFLKHSNLLYV-------NVIGLADDSVRSL-KLPPWACGFIMDTNSDPKNCP--FQL 408
CV SN L + N++ L D + +L K P G I+ + K+ +Q
Sbjct: 343 CV----RSNFLVLCYLHDVKNILQLHDLTTGALLKTFPLDVGSIVGYSGQKKDTEIFYQF 398
Query: 409 CSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKT 464
S + P Y T + E ++F E + + +++ SKDG +PM + HK
Sbjct: 399 TSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 458
Query: 465 DSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQWHADG 523
+ P ++ YG + + + N+ R + V G ILA ++RGGGE G WH G
Sbjct: 459 GIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVANIRGGGEYGETWHKGG 518
Query: 524 RLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEA 583
L K N D + + L +G++ P T+ S GG+L A N P+L V +
Sbjct: 519 ILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQV 578
Query: 584 PFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HYPSIH 638
+D+L T + ++G S ++H ++ +Y P N+K P+ YPS+
Sbjct: 579 GVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLVKYSPLHNVKLPEADDIQYPSML 634
Query: 639 ITAYENDERV 648
+ ++D+RV
Sbjct: 635 LLTADHDDRV 644
>gi|24308223 hypothetical protein LOC57577 [Homo sapiens]
Length = 936
Score = 34.7 bits (78), Expect = 0.32
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 18/169 (10%)
Query: 73 KDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGFVYYQEGCCLVRS 132
K+ Q KQ+ + L M + +L + + EY+ I +K F+ E CLV+
Sbjct: 177 KENQDKKQQKDPRLTMEMRHKQVKENRLRREKELEYQRIEKTLKKSAFL---EAQCLVQE 233
Query: 133 KDE----EADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSEASTCVIIK 188
+ + EA + E+ E +KL + I+ R + K + E+S+ S
Sbjct: 234 EKKRKALEAKKEEEEI--QREMVKLRREIIERRRTVKAAWKIEKKRQEENSQNS------ 285
Query: 189 LSDQPVMEASFPNVSSFEWVKDEED--EDVLFYTFQRNLRCHDVYRATF 235
S++ + +++ + VK+ + ++VL TF+ N +C Y A +
Sbjct: 286 -SEKVMFQSTHILPDEEKMVKERKRKLKEVLIQTFKENQQCQKRYFAAW 333
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 31.2 bits (69), Expect = 3.6
Identities = 23/121 (19%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 1 MQQKTKLFLQALKYSIPHLGKC-----MQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNK 55
++++ K+ +++K + L K K+ L HY ++ + +HL K
Sbjct: 585 IEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEK----- 639
Query: 56 PKISELARNIPSRSFSCKDLQPVKQEN------EKPLPENMDAFEKVRTKLETQPQEEYE 109
+ L + I + +C+ ++ ++QEN + L + +D+F+ + +LE+ +E +
Sbjct: 640 -ENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQ 698
Query: 110 I 110
+
Sbjct: 699 L 699
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 31.2 bits (69), Expect = 3.6
Identities = 23/121 (19%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 1 MQQKTKLFLQALKYSIPHLGKC-----MQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNK 55
++++ K+ +++K + L K K+ L HY ++ + +HL K
Sbjct: 585 IEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEK----- 639
Query: 56 PKISELARNIPSRSFSCKDLQPVKQEN------EKPLPENMDAFEKVRTKLETQPQEEYE 109
+ L + I + +C+ ++ ++QEN + L + +D+F+ + +LE+ +E +
Sbjct: 640 -ENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQ 698
Query: 110 I 110
+
Sbjct: 699 L 699
>gi|116686122 kinesin family member 4 [Homo sapiens]
Length = 1232
Score = 30.0 bits (66), Expect = 7.9
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 45 KYHLTKCLQNKPKISELARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQP 104
KY + + + +K ++S+L ++ SC D+Q K L E + F ++ T+L+
Sbjct: 868 KYLIGELVSSKIQVSKLESSLKQSKTSCADMQ-------KMLFEERNHFAEIETELQA-- 918
Query: 105 QEEYEIINVEVKHGGFVYY 123
E++ +E +H V Y
Sbjct: 919 ----ELVRMEQQHQEKVLY 933
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,123,290
Number of Sequences: 37866
Number of extensions: 1378996
Number of successful extensions: 3210
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3202
Number of HSP's gapped (non-prelim): 10
length of query: 727
length of database: 18,247,518
effective HSP length: 110
effective length of query: 617
effective length of database: 14,082,258
effective search space: 8688753186
effective search space used: 8688753186
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.