Guide to the Human Genome
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Name: RPS5 Sequence: fasta or formatted (204aa) NCBI GI: 13904870
Description:

ribosomal protein S5

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         24           2
 C cysteine            1.5          3           1
 D aspartate           4.4          9           2
 E glutamate           6.4         13           1
 F phenylalanine       2.0          4           1
 G glycine             4.9         10           1
 H histidine           2.0          4           1
 I isoleucine          7.8         16           2
 K lysine              7.8         16           3
 L leucine             7.4         15           2
 M methionine          2.5          5           3
 N asparagine          5.9         12           2
 P proline             3.4          7           1
 Q glutamine           2.9          6           1
 R arginine            8.3         17           2
 S serine              5.4         11           2
 T threonine           5.4         11           1
 V valine              6.4         13           1
 W tryptophan          1.5          3           1
 Y tyrosine            2.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein S5 
MRPS7                 0.032   mitochondrial ribosomal protein S7 
ZNF592                0.013   zinc finger protein 592 
RRP12                 0.005   ribosomal RNA processing 12 homolog isoform 2 [Homo...
RRP12                 0.005   ribosomal RNA processing 12 homolog isoform 1 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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