Search of human proteins with 5803050

Search of human proteins with 5803050

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5803050 KDEL receptor 2 isoform 1 [Homo sapiens]
         (212 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5803050 KDEL receptor 2 isoform 1 [Homo sapiens]                   426   e-120
gi|5803048 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein ...   375   e-104
gi|6857802 KDEL receptor 3 isoform a [Homo sapiens]                   337   3e-93
gi|8051611 KDEL receptor 3 isoform b [Homo sapiens]                   319   1e-87
gi|154736713 KDEL receptor 2 isoform 2 [Homo sapiens]                 234   3e-62
gi|89062505 PREDICTED: similar to KDEL receptor [Homo sapiens]        195   3e-50
gi|7019551 UbiA prenyltransferase domain containing 1 [Homo sapi...    29   2.6  
gi|11968057 ARP6 actin-related protein 6 homolog [Homo sapiens]        29   3.4  
gi|7662308 transmembrane protein 63A [Homo sapiens]                    29   3.4  
gi|55769589 transmembrane protein 63B [Homo sapiens]                   28   7.5  
gi|5729756 voltage-dependent calcium channel gamma-3 subunit [Ho...    27   9.8  

>gi|5803050 KDEL receptor 2 isoform 1 [Homo sapiens]
          Length = 212

 Score =  426 bits (1095), Expect = e-120
 Identities = 212/212 (100%), Positives = 212/212 (100%)

Query: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60
           MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN
Sbjct: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query: 61  TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLEILW 120
           TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLEILW
Sbjct: 61  TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLEILW 120

Query: 121 TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYFEGFFDLIA 180
           TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYFEGFFDLIA
Sbjct: 121 TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYFEGFFDLIA 180

Query: 181 VVAGVVQTILYCDFFYLYITKVLKGKKLSLPA 212
           VVAGVVQTILYCDFFYLYITKVLKGKKLSLPA
Sbjct: 181 VVAGVVQTILYCDFFYLYITKVLKGKKLSLPA 212


>gi|5803048 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein
           retention receptor 1 [Homo sapiens]
          Length = 212

 Score =  375 bits (963), Expect = e-104
 Identities = 177/212 (83%), Positives = 199/212 (93%)

Query: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60
           MN+FR  GDLSHL AI++LLLKIWK+RSCAGISGKSQ+LFA+VFT RYLDLFT++ISLYN
Sbjct: 1   MNLFRFLGDLSHLLAIILLLLKIWKSRSCAGISGKSQVLFAVVFTARYLDLFTNYISLYN 60

Query: 61  TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLEILW 120
           T MKV+Y+ACS+ TV+LIY KFKATYDGNHDTFRVEFLVVP   L+FLVNHDF+PLEILW
Sbjct: 61  TCMKVVYIACSFTTVWLIYSKFKATYDGNHDTFRVEFLVVPTAILAFLVNHDFTPLEILW 120

Query: 121 TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYFEGFFDLIA 180
           TFSIYLESVAILPQLFM+SKTGEAETIT+HYLF LG+YR LYL NWIWR++FEGFFDLIA
Sbjct: 121 TFSIYLESVAILPQLFMVSKTGEAETITSHYLFALGVYRTLYLFNWIWRYHFEGFFDLIA 180

Query: 181 VVAGVVQTILYCDFFYLYITKVLKGKKLSLPA 212
           +VAG+VQT+LYCDFFYLYITKVLKGKKLSLPA
Sbjct: 181 IVAGLVQTVLYCDFFYLYITKVLKGKKLSLPA 212


>gi|6857802 KDEL receptor 3 isoform a [Homo sapiens]
          Length = 214

 Score =  337 bits (865), Expect = 3e-93
 Identities = 162/211 (76%), Positives = 188/211 (89%)

Query: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60
           MN+FR+ GDLSHL A+++LL KIW+++ C GISGKSQ+LFALVFTTRYLDLFT+FIS+YN
Sbjct: 1   MNVFRILGDLSHLLAMILLLGKIWRSKCCKGISGKSQILFALVFTTRYLDLFTNFISIYN 60

Query: 61  TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLEILW 120
           T MKV++L C+Y TVY+IY KF+ T+D  +DTFR+EFL+VPV GLSFL N+ F+ LEILW
Sbjct: 61  TVMKVVFLLCAYVTVYMIYGKFRKTFDSENDTFRLEFLLVPVIGLSFLENYSFTLLEILW 120

Query: 121 TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYFEGFFDLIA 180
           TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYL NWI R+  E F+D IA
Sbjct: 121 TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLANWIRRYQTENFYDQIA 180

Query: 181 VVAGVVQTILYCDFFYLYITKVLKGKKLSLP 211
           VV+GVVQTI YCDFFYLY+TKVLKGKKLSLP
Sbjct: 181 VVSGVVQTIFYCDFFYLYVTKVLKGKKLSLP 211


>gi|8051611 KDEL receptor 3 isoform b [Homo sapiens]
          Length = 220

 Score =  319 bits (817), Expect = 1e-87
 Identities = 152/201 (75%), Positives = 178/201 (88%)

Query: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60
           MN+FR+ GDLSHL A+++LL KIW+++ C GISGKSQ+LFALVFTTRYLDLFT+FIS+YN
Sbjct: 1   MNVFRILGDLSHLLAMILLLGKIWRSKCCKGISGKSQILFALVFTTRYLDLFTNFISIYN 60

Query: 61  TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLEILW 120
           T MKV++L C+Y TVY+IY KF+ T+D  +DTFR+EFL+VPV GLSFL N+ F+ LEILW
Sbjct: 61  TVMKVVFLLCAYVTVYMIYGKFRKTFDSENDTFRLEFLLVPVIGLSFLENYSFTLLEILW 120

Query: 121 TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYFEGFFDLIA 180
           TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYL NWI R+  E F+D IA
Sbjct: 121 TFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLANWIRRYQTENFYDQIA 180

Query: 181 VVAGVVQTILYCDFFYLYITK 201
           VV+GVVQTI YCDFFYLY+TK
Sbjct: 181 VVSGVVQTIFYCDFFYLYVTK 201


>gi|154736713 KDEL receptor 2 isoform 2 [Homo sapiens]
          Length = 186

 Score =  234 bits (598), Expect = 3e-62
 Identities = 117/117 (100%), Positives = 117/117 (100%)

Query: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60
           MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN
Sbjct: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60

Query: 61  TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLE 117
           TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLE
Sbjct: 61  TSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLE 117


>gi|89062505 PREDICTED: similar to KDEL receptor [Homo sapiens]
          Length = 219

 Score =  195 bits (495), Expect = 3e-50
 Identities = 100/212 (47%), Positives = 145/212 (68%), Gaps = 5/212 (2%)

Query: 1   MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYN 60
           M + R+ GD+ HL+AI+ILL K+ + RS AGIS KS  LFA+VF TRY+D+  SFI +YN
Sbjct: 1   MALVRVVGDMLHLSAILILLSKMLRQRSAAGISLKSMELFAIVFCTRYIDVLFSFIGIYN 60

Query: 61  TSMKVIYLACSYATVYLIYLK--FKATYDGNHDTFRVEFLVVPVGGLSFLVN---HDFSP 115
           T+MK+ ++A +    YL+  K  +KATYD  +DTFR+ +L+VP   LS L +        
Sbjct: 61  TTMKIFFIASTLHICYLMKFKSPWKATYDRENDTFRIRYLIVPCVVLSILFHGTPRRSIV 120

Query: 116 LEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYFEGF 175
           +E+ WTFS YLE+VAILPQ+F++  T   + +T+HYLF LG YR +Y+++W  R+Y    
Sbjct: 121 IELCWTFSQYLEAVAILPQIFLLEYTERYDALTSHYLFCLGAYRVVYMIHWAIRYYIYHK 180

Query: 176 FDLIAVVAGVVQTILYCDFFYLYITKVLKGKK 207
              I+V++G VQ++LY DFFY Y+ +VL+  K
Sbjct: 181 VRWISVLSGFVQSLLYVDFFYHYVVQVLRKAK 212


>gi|7019551 UbiA prenyltransferase domain containing 1 [Homo
           sapiens]
          Length = 338

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 95  VEFLVVPVGGLSFLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETI 147
           + F  V +G L  L+   F PL +++ ++I + S+AI P ++ I      E I
Sbjct: 178 IGFKYVALGDLIILIT--FGPLAVMFAYAIQVGSLAIFPLVYAIPLALSTEAI 228


>gi|11968057 ARP6 actin-related protein 6 homolog [Homo sapiens]
          Length = 396

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 14/60 (23%)

Query: 127 ESVAILPQLFMISKTGEAETITTHY---------LFFLGLYRALYLVNW-----IWRFYF 172
           E+V+++P     SKT   +T T +          LF++  ++  YLVNW     +W + F
Sbjct: 20  ENVSVIPNCQFRSKTARLKTFTANQIDEIKDPSGLFYILPFQKGYLVNWDVQRQVWDYLF 79


>gi|7662308 transmembrane protein 63A [Homo sapiens]
          Length = 807

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 101 PVGGLSFLVNHDFSPLEILWTFSIYLESVAILPQLFMI--SKTGEAETITTHYLFFLGLY 158
           P+  L+  +   F P  +LW+FS  L S+     L     +K+GE + + T    FL ++
Sbjct: 454 PIHALNNPIISQFFPTLLLWSFSALLPSIVYYSTLLESHWTKSGENQIMMTKVYIFL-IF 512

Query: 159 RALYLVN---WIWRFYFEGFFDLIAVVAGV 185
             L L +       F+F   FD  +  A +
Sbjct: 513 MVLILPSLGLTSLDFFFRWLFDKTSSEASI 542


>gi|55769589 transmembrane protein 63B [Homo sapiens]
          Length = 832

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 67  YLACSYATVYLIYLKFKATYDGNHDTFRVEFLVV-PVGGLSFLVNHDFSPLEILWTFSIY 125
           +L C    V L  L F  T      T   +F V  PV  L+  +   F P  +LW FS  
Sbjct: 431 WLRCLVINVVLFILLFFLTTPAIIITTMDKFNVTKPVEYLNNPIITQFFPTLLLWCFSAL 490

Query: 126 LESVAILPQLFMISKTGEAETITT-HYLFFLGLYRALYL 163
           L ++      F    T   E  TT H  +   ++  L L
Sbjct: 491 LPTIVYYSAFFEAHWTRSGENRTTMHKCYTFLIFMVLLL 529


>gi|5729756 voltage-dependent calcium channel gamma-3 subunit [Homo
           sapiens]
          Length = 315

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 168 WRFYFEGFFDLIAVVAGVVQTILYCD 193
           W FYF  F  +IA + GVV   +Y +
Sbjct: 177 WSFYFGAFSFIIAEIVGVVAVHIYIE 202


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.332    0.145    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,758,255
Number of Sequences: 37866
Number of extensions: 252403
Number of successful extensions: 642
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 633
Number of HSP's gapped (non-prelim): 11
length of query: 212
length of database: 18,247,518
effective HSP length: 98
effective length of query: 114
effective length of database: 14,536,650
effective search space: 1657178100
effective search space used: 1657178100
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.