Search of human proteins with 56676399

Search of human proteins with 56676399

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|56676399 methyltransferase like 11A [Homo sapiens]
         (223 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|56676399 methyltransferase like 11A [Homo sapiens]                 457   e-129
gi|209870065 methyltransferase like 11B [Homo sapiens]                244   4e-65
gi|116014336 methyltransferase like 9 isoform 1 [Homo sapiens]         33   0.26 
gi|116014334 methyltransferase like 9 isoform 2 [Homo sapiens]         33   0.26 
gi|207452735 epiplakin 1 [Homo sapiens]                                29   2.8  
gi|93141204 methyltransferase like 2B [Homo sapiens]                   29   2.8  
gi|28076869 serine (or cysteine) proteinase inhibitor, clade B (...    28   4.8  
gi|82659109 retinoblastoma-associated factor 600 [Homo sapiens]        28   6.3  

>gi|56676399 methyltransferase like 11A [Homo sapiens]
          Length = 223

 Score =  457 bits (1177), Expect = e-129
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKT 60
           MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKT
Sbjct: 1   MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKT 60

Query: 61  GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ 120
           GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ
Sbjct: 61  GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ 120

Query: 121 DFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVD 180
           DFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVD
Sbjct: 121 DFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVD 180

Query: 181 SSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFALR 223
           SSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFALR
Sbjct: 181 SSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFALR 223


>gi|209870065 methyltransferase like 11B [Homo sapiens]
          Length = 283

 Score =  244 bits (623), Expect = 4e-65
 Identities = 113/222 (50%), Positives = 166/222 (74%), Gaps = 1/222 (0%)

Query: 1   MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKT 60
           +TS+VI  E QFY++AK +++++P T +GM+G +  +SS DI +S+KFL++F+  GP + 
Sbjct: 57  LTSQVINGEMQFYARAKLFYQEVPATEEGMMGNFIELSSPDIQASQKFLRKFVG-GPGRA 115

Query: 61  GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQ 120
           GT CALDCG+GIGR++K +LLP+F  V++VD+ E FL++A+ YL  +G +V +Y C  LQ
Sbjct: 116 GTDCALDCGSGIGRVSKHVLLPVFNSVELVDMMESFLLEAQNYLQVKGDKVESYHCYSLQ 175

Query: 121 DFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVD 180
           +FTP    YDVIWIQWV GHLTD+ L  FL RC+  L+ NGII++KDN+A+EG ILD  D
Sbjct: 176 EFTPPFRRYDVIWIQWVSGHLTDKDLLAFLSRCRDGLKENGIIILKDNVAREGCILDLSD 235

Query: 181 SSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFAL 222
           SSV RD+D++R +I  +GL +L +E+Q+  P++   V+ FAL
Sbjct: 236 SSVTRDMDILRSLIRKSGLVVLGQEKQDGFPEQCIPVWMFAL 277


>gi|116014336 methyltransferase like 9 isoform 1 [Homo sapiens]
          Length = 318

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 16/107 (14%)

Query: 26  TVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFR 85
           +++G+LG      S+ + S  +F QR L+  P+   T   LD GAG G +TK ++ P F 
Sbjct: 116 SINGLLGR----GSMFVFSPDQF-QRLLKINPDWK-THRLLDLGAGDGEVTK-IMSPHFE 168

Query: 86  EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVI 132
           E+   +++E  + Q +          + Y   G+ ++      YDVI
Sbjct: 169 EIYATELSETMIWQLQK---------KKYRVLGINEWQNTGFQYDVI 206


>gi|116014334 methyltransferase like 9 isoform 2 [Homo sapiens]
          Length = 317

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 16/107 (14%)

Query: 26  TVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFR 85
           +++G+LG      S+ + S  +F QR L+  P+   T   LD GAG G +TK ++ P F 
Sbjct: 116 SINGLLGR----GSMFVFSPDQF-QRLLKINPDWK-THRLLDLGAGDGEVTK-IMSPHFE 168

Query: 86  EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVI 132
           E+   +++E  + Q +          + Y   G+ ++      YDVI
Sbjct: 169 EIYATELSETMIWQLQK---------KKYRVLGINEWQNTGFQYDVI 206


>gi|207452735 epiplakin 1 [Homo sapiens]
          Length = 5090

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 142 TDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILD 177
           + + L+ +  RCKG LRP   +++ +  A  G I+D
Sbjct: 620 SQERLSIYEARCKGLLRPGTALILLEAQAATGFIID 655


>gi|93141204 methyltransferase like 2B [Homo sapiens]
          Length = 378

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 18/169 (10%)

Query: 5   VIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKTGTSC 64
           ++E++ +  SK+  +  Q PP  + +      IS ++I +          E P  + T  
Sbjct: 136 IMEEQHKCSSKSLEHKTQTPPVEENVTQ---KISDLEICAD---------EFPGSSATYR 183

Query: 65  ALDCGAGIGRITKRLLLP-----LFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL 119
            L+ G G+G     +L       LF        T   LVQ  +           +  C  
Sbjct: 184 ILEVGCGVGNTVFPILQTNNDPGLFVYCCDFSSTAIELVQTNSEYDPSRCFAFVHDLCDE 243

Query: 120 QDFTPEPD-SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 167
           +   P P  S D+I + +V+  +    + + + R    L+P G+++++D
Sbjct: 244 EKSYPVPKGSLDIIILIFVLSAVVPDKMQKAINRLSRLLKPGGMVLLRD 292


>gi|28076869 serine (or cysteine) proteinase inhibitor, clade B
           (ovalbumin), member 4 [Homo sapiens]
          Length = 390

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 18/63 (28%), Positives = 29/63 (46%)

Query: 92  ITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLR 151
           +TE+   +A TY  +    V + F   L +F    D+Y++     + G  T Q L E+L 
Sbjct: 62  VTENTTEKAATYHVDRSGNVHHQFQKLLTEFNKSTDAYELKIANKLFGEKTYQFLQEYLD 121

Query: 152 RCK 154
             K
Sbjct: 122 AIK 124


>gi|82659109 retinoblastoma-associated factor 600 [Homo sapiens]
          Length = 5183

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/46 (26%), Positives = 25/46 (54%)

Query: 173  GVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVY 218
            G ++ D+ + +C+D D+V  +   +G+ LL   +  +L   +  VY
Sbjct: 4380 GPLMRDIKNKICQDCDLVALLEDDSGMELLVNNKIISLDLPVAEVY 4425


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.141    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,891,432
Number of Sequences: 37866
Number of extensions: 378566
Number of successful extensions: 723
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 711
Number of HSP's gapped (non-prelim): 14
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.