Search of human proteins with 56550073

Search of human proteins with 56550073

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|56550073 peptidoglycan recognition protein-I-beta precursor
[Homo sapiens]
         (373 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|56550073 peptidoglycan recognition protein-I-beta precursor [...   776   0.0  
gi|16418405 peptidoglycan recognition protein 3 precursor [Homo ...   477   e-135
gi|4827036 peptidoglycan recognition protein 1 [Homo sapiens]         162   6e-40
gi|156616294 peptidoglycan recognition protein 2 precursor [Homo...   118   1e-26
gi|4506885 semenogelin II precursor [Homo sapiens]                     30   3.5  
gi|66346695 fibrillin 2 precursor [Homo sapiens]                       29   7.8  

>gi|56550073 peptidoglycan recognition protein-I-beta precursor
           [Homo sapiens]
          Length = 373

 Score =  776 bits (2004), Expect = 0.0
 Identities = 373/373 (100%), Positives = 373/373 (100%)

Query: 1   MLPWLLVFSALGIQAWGDSSWNKTQAKQVSEGLQYLFENISQLTEKGLPTDVSTTVSRKA 60
           MLPWLLVFSALGIQAWGDSSWNKTQAKQVSEGLQYLFENISQLTEKGLPTDVSTTVSRKA
Sbjct: 1   MLPWLLVFSALGIQAWGDSSWNKTQAKQVSEGLQYLFENISQLTEKGLPTDVSTTVSRKA 60

Query: 61  WGAEAVGCSIQLTTPVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGCDVAYNFL 120
           WGAEAVGCSIQLTTPVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGCDVAYNFL
Sbjct: 61  WGAEAVGCSIQLTTPVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGCDVAYNFL 120

Query: 121 VGDDGRVYEGVGWNIQGVHTQGYNNISLGFAFFGTKKGHSPSPAALSAMENLITYAVQKG 180
           VGDDGRVYEGVGWNIQGVHTQGYNNISLGFAFFGTKKGHSPSPAALSAMENLITYAVQKG
Sbjct: 121 VGDDGRVYEGVGWNIQGVHTQGYNNISLGFAFFGTKKGHSPSPAALSAMENLITYAVQKG 180

Query: 181 HLSSSYVQPLLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCPRMTLPAKYGIIIH 240
           HLSSSYVQPLLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCPRMTLPAKYGIIIH
Sbjct: 181 HLSSSYVQPLLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCPRMTLPAKYGIIIH 240

Query: 241 TAGRTCNISDECRLLVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYEGVGWNVQGSSTPGY 300
           TAGRTCNISDECRLLVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYEGVGWNVQGSSTPGY
Sbjct: 241 TAGRTCNISDECRLLVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYEGVGWNVQGSSTPGY 300

Query: 301 DDIALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLLVGHSDVARTLSPGQA 360
           DDIALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLLVGHSDVARTLSPGQA
Sbjct: 301 DDIALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLLVGHSDVARTLSPGQA 360

Query: 361 LYNIISTWPHFKH 373
           LYNIISTWPHFKH
Sbjct: 361 LYNIISTWPHFKH 373


>gi|16418405 peptidoglycan recognition protein 3 precursor [Homo
           sapiens]
          Length = 341

 Score =  477 bits (1227), Expect = e-135
 Identities = 230/372 (61%), Positives = 267/372 (71%), Gaps = 34/372 (9%)

Query: 2   LPWLLVFSALGIQAWGDSSWNKTQAKQVSEGLQYLFENISQLTEKGLPTDVSTTVSRKAW 61
           LPWLL F  LG+QAW                                  D  T VSRK W
Sbjct: 4   LPWLLAFFILGLQAW----------------------------------DTPTIVSRKEW 29

Query: 62  GAEAVGCSIQLTTPVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVHNNSGCDVAYNFLV 121
           GA  + C   LT PV  ++   +PG++C  Q+VCSQ LR LQ+H V+    CDVAYNFLV
Sbjct: 30  GARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRGLQSHSVYTIGWCDVAYNFLV 89

Query: 122 GDDGRVYEGVGWNIQGVHTQGYNNISLGFAFFGTKKGHSPSPAALSAMENLITYAVQKGH 181
           GDDGRVYEGVGWNIQG+HTQGYNNISLG AFFG K G SPSPAALSA E LI+YA+QKGH
Sbjct: 90  GDDGRVYEGVGWNIQGLHTQGYNNISLGIAFFGNKIGSSPSPAALSAAEGLISYAIQKGH 149

Query: 182 LSSSYVQPLLGKGENCLAPRQKTSLKKACPGVVPRSVWGARETHCPRMTLPAKYGIIIHT 241
           LS  Y+QPLL K E CL P+     +K CP ++ RS W ARETHCP+M LPAKY IIIHT
Sbjct: 150 LSPRYIQPLLLKEETCLDPQHPVMPRKVCPNIIKRSAWEARETHCPKMNLPAKYVIIIHT 209

Query: 242 AGRTCNISDECRLLVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYEGVGWNVQGSSTPGYD 301
           AG +C +S +C+ +VR+IQSF++D    CDIGY+FLVGQDG +YEGVGW++QGS T G++
Sbjct: 210 AGTSCTVSTDCQTVVRNIQSFHMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFN 269

Query: 302 DIALGITFMGTFTGIPPNAAALEAAQDLIQCAMVKGYLTPNYLLVGHSDVARTLSPGQAL 361
           DIALGI F+G F   PPNAAALEAAQDLIQCA+V+GYLTPNYLL+GHSDV   LSPGQAL
Sbjct: 270 DIALGIAFIGYFVEKPPNAAALEAAQDLIQCAVVEGYLTPNYLLMGHSDVVNILSPGQAL 329

Query: 362 YNIISTWPHFKH 373
           YNIISTWPHFKH
Sbjct: 330 YNIISTWPHFKH 341


>gi|4827036 peptidoglycan recognition protein 1 [Homo sapiens]
          Length = 196

 Score =  162 bits (409), Expect = 6e-40
 Identities = 74/177 (41%), Positives = 112/177 (63%), Gaps = 2/177 (1%)

Query: 198 LAPRQKTSLKKACPGVVPRSVWGARETHCPR-MTLPAKYGIIIHTAGRTCNISDECRLLV 256
           L   Q+T     C  +VPR+ W A  + C + ++LP +Y ++ HTAG +CN    C+   
Sbjct: 18  LGAAQETEDPACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQA 77

Query: 257 RDIQSFYIDRLKSCDIGYNFLVGQDGAIYEGVGWNVQGS-STPGYDDIALGITFMGTFTG 315
           R++Q +++  L  CD+GYNFL+G+DG +YEG GWN  G+ S   ++ +++GI+FMG +  
Sbjct: 78  RNVQHYHMKTLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSGHLWNPMSIGISFMGNYMD 137

Query: 316 IPPNAAALEAAQDLIQCAMVKGYLTPNYLLVGHSDVARTLSPGQALYNIISTWPHFK 372
             P   A+ AAQ L+ C + +G L  NY+L GH DV RTLSPG  LY++I  WPH++
Sbjct: 138 RVPTPQAIRAAQGLLACGVAQGALRSNYVLKGHRDVQRTLSPGNQLYHLIQNWPHYR 194



 Score =  110 bits (276), Expect = 2e-24
 Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 1/140 (0%)

Query: 49  PTDVSTTVSRKAWGAEAVGCSIQLTTPVNVLVIHHVPGLECHDQTVCSQRLRELQAHHVH 108
           P   S  V R  W A A  C+  L+ P+  +V+ H  G  C+    C Q+ R +Q +H+ 
Sbjct: 27  PACCSPIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMK 86

Query: 109 NNSGCDVAYNFLVGDDGRVYEGVGWNIQGVHT-QGYNNISLGFAFFGTKKGHSPSPAALS 167
               CDV YNFL+G+DG VYEG GWN  G H+   +N +S+G +F G      P+P A+ 
Sbjct: 87  TLGWCDVGYNFLIGEDGLVYEGRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIR 146

Query: 168 AMENLITYAVQKGHLSSSYV 187
           A + L+   V +G L S+YV
Sbjct: 147 AAQGLLACGVAQGALRSNYV 166


>gi|156616294 peptidoglycan recognition protein 2 precursor [Homo
           sapiens]
          Length = 576

 Score =  118 bits (295), Expect = 1e-26
 Identities = 65/178 (36%), Positives = 95/178 (53%), Gaps = 5/178 (2%)

Query: 199 APRQKTSLKKACPGVVPRSVWGARETHC-PRMT-LPAKYGIIIHT--AGRTCNISDECRL 254
           A ++ T     CP + PR  WGA      P++  LP  +  + HT      C     C  
Sbjct: 368 ATKEFTEAFLGCPAIHPRCRWGAAPYRGRPKLLQLPLGFLYVHHTYVPAPPCTDFTRCAA 427

Query: 255 LVRDIQSFYIDRLKSCDIGYNFLVGQDGAIYEGVGWNVQGSSTPGYDDIALGITFMGTFT 314
            +R +Q ++ D     DIGY+F+VG DG +YEG GW+  G+ T G++    G+  +G +T
Sbjct: 428 NMRSMQRYHQDTQGWGDIGYSFVVGSDGYVYEGRGWHWVGAHTLGHNSRGFGVAIVGNYT 487

Query: 315 GIPPNAAALEAAQD-LIQCAMVKGYLTPNYLLVGHSDVARTLSPGQALYNIISTWPHF 371
              P  AAL   +D L  CA+  G L P+Y L+GH  + RT  PG AL++++ TWPHF
Sbjct: 488 AALPTEAALRTVRDTLPSCAVRAGLLRPDYALLGHRQLVRTDCPGDALFDLLRTWPHF 545



 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 56/159 (35%), Positives = 76/159 (47%), Gaps = 15/159 (9%)

Query: 58  RKAWGAEAV-GCSIQLTTPVNVLVIHH--VPGLECHDQTVCSQRLRELQAHHVHNNSGCD 114
           R  WGA    G    L  P+  L +HH  VP   C D T C+  +R +Q +H       D
Sbjct: 385 RCRWGAAPYRGRPKLLQLPLGFLYVHHTYVPAPPCTDFTRCAANMRSMQRYHQDTQGWGD 444

Query: 115 VAYNFLVGDDGRVYEGVGWNIQGVHTQGYNNISLGFAFFGTKKGHSPSPAAL-SAMENLI 173
           + Y+F+VG DG VYEG GW+  G HT G+N+   G A  G      P+ AAL +  + L 
Sbjct: 445 IGYSFVVGSDGYVYEGRGWHWVGAHTLGHNSRGFGVAIVGNYTAALPTEAALRTVRDTLP 504

Query: 174 TYAVQKGHLSSSYVQPLLGKGENCLAPRQKTSLKKACPG 212
           + AV+ G L   Y   LLG          +  ++  CPG
Sbjct: 505 SCAVRAGLLRPDYA--LLG---------HRQLVRTDCPG 532


>gi|4506885 semenogelin II precursor [Homo sapiens]
          Length = 582

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 10/115 (8%)

Query: 86  GLECHDQTVCSQRLRELQAHHVHNNSGCDVAYNFLVGDDGRVYEGVGWNIQGVHTQ---- 141
           G + H  +  S R  E Q HH   +   DV+   +         G   N   +H+Q    
Sbjct: 280 GRKAHKISYPSSRTEERQLHHGEKSVQKDVSKGSISIQTEEKIHGKSQNQVTIHSQDQEH 339

Query: 142 GYNNISLGFAFFGTKKGHSPSPAALSAMENLITYAVQKGHLSSSYVQPLLGKGEN 196
           G+    + +    T++ H      L+  E  I   V KG +S    + + GK +N
Sbjct: 340 GHKENKISYQSSSTEERH------LNCGEKGIQKGVSKGSISIQTEEQIHGKSQN 388


>gi|66346695 fibrillin 2 precursor [Homo sapiens]
          Length = 2912

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 8/74 (10%)

Query: 194  GENCLAPRQKTSLKKACPGVVPRSVWGARETHCPRMTLPAKYGIIIHTAGRTCNISDECR 253
            G +C+   + +   K C   + ++  G+ +  CPR       G ++   G+TC   DEC+
Sbjct: 2486 GTSCIDLDECSQSPKPC-NYICKNTEGSYQCSCPR-------GYVLQEDGKTCKDLDECQ 2537

Query: 254  LLVRDIQSFYIDRL 267
                + Q   ++ L
Sbjct: 2538 TKQHNCQFLCVNTL 2551


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,030,200
Number of Sequences: 37866
Number of extensions: 681680
Number of successful extensions: 1399
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1382
Number of HSP's gapped (non-prelim): 11
length of query: 373
length of database: 18,247,518
effective HSP length: 104
effective length of query: 269
effective length of database: 14,309,454
effective search space: 3849243126
effective search space used: 3849243126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.