Guide to the Human Genome
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Search of human proteins with 134244281

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|134244281 melanoma-associated antigen p97 isoform 1
precursor [Homo sapiens]
         (738 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|134244281 melanoma-associated antigen p97 isoform 1 precursor...  1520   0.0  
gi|16163666 melanoma-associated antigen p97 isoform 2 precursor ...   488   e-138
gi|54607120 lactotransferrin precursor [Homo sapiens]                 467   e-131
gi|4557871 transferrin [Homo sapiens]                                 462   e-130
gi|33695155 hepsin [Homo sapiens]                                      33   1.2  
gi|4504481 hepsin [Homo sapiens]                                       33   1.2  
gi|145275213 coagulation factor XII precursor [Homo sapiens]           31   4.7  
gi|8922913 hypothetical protein LOC55317 [Homo sapiens]                31   4.7  

>gi|134244281 melanoma-associated antigen p97 isoform 1 precursor
           [Homo sapiens]
          Length = 738

 Score = 1520 bits (3936), Expect = 0.0
 Identities = 738/738 (100%), Positives = 738/738 (100%)

Query: 1   MRGPSGALWLLLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREAGIQPSLLCVRGTSA 60
           MRGPSGALWLLLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREAGIQPSLLCVRGTSA
Sbjct: 1   MRGPSGALWLLLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREAGIQPSLLCVRGTSA 60

Query: 61  DHCVQLIAAQEADAITLDGGAIYEAGKEHGLKPVVGEVYDQEVGTSYYAVAVVRRSSHVT 120
           DHCVQLIAAQEADAITLDGGAIYEAGKEHGLKPVVGEVYDQEVGTSYYAVAVVRRSSHVT
Sbjct: 61  DHCVQLIAAQEADAITLDGGAIYEAGKEHGLKPVVGEVYDQEVGTSYYAVAVVRRSSHVT 120

Query: 121 IDTLKGVKSCHTGINRTVGWNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETS 180
           IDTLKGVKSCHTGINRTVGWNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETS
Sbjct: 121 IDTLKGVKSCHTGINRTVGWNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETS 180

Query: 181 YSESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGDVAFVKHSTVLENTDGKT 240
           YSESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGDVAFVKHSTVLENTDGKT
Sbjct: 181 YSESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGDVAFVKHSTVLENTDGKT 240

Query: 241 LPSWGQALLSQDFELLCRDGSRADVTEWRQCHLARVPAHAVVVRADTDGGLIFRLLNEGQ 300
           LPSWGQALLSQDFELLCRDGSRADVTEWRQCHLARVPAHAVVVRADTDGGLIFRLLNEGQ
Sbjct: 241 LPSWGQALLSQDFELLCRDGSRADVTEWRQCHLARVPAHAVVVRADTDGGLIFRLLNEGQ 300

Query: 301 RLFSHEGSSFQMFSSEAYGQKDLLFKDSTSELVPIATQTYEAWLGHEYLHAMKGLLCDPN 360
           RLFSHEGSSFQMFSSEAYGQKDLLFKDSTSELVPIATQTYEAWLGHEYLHAMKGLLCDPN
Sbjct: 301 RLFSHEGSSFQMFSSEAYGQKDLLFKDSTSELVPIATQTYEAWLGHEYLHAMKGLLCDPN 360

Query: 361 RLPPYLRWCVLSTPEIQKCGDMAVAFRRQRLKPEIQCVSAKSPQHCMERIQAEQVDAVTL 420
           RLPPYLRWCVLSTPEIQKCGDMAVAFRRQRLKPEIQCVSAKSPQHCMERIQAEQVDAVTL
Sbjct: 361 RLPPYLRWCVLSTPEIQKCGDMAVAFRRQRLKPEIQCVSAKSPQHCMERIQAEQVDAVTL 420

Query: 421 SGEDIYTAGKTYGLVPAAGEHYAPEDSSNSYYVVAVVRRDSSHAFTLDELRGKRSCHAGF 480
           SGEDIYTAGKTYGLVPAAGEHYAPEDSSNSYYVVAVVRRDSSHAFTLDELRGKRSCHAGF
Sbjct: 421 SGEDIYTAGKTYGLVPAAGEHYAPEDSSNSYYVVAVVRRDSSHAFTLDELRGKRSCHAGF 480

Query: 481 GSPAGWDVPVGALIQRGFIRPKDCDVLTAVSEFFNASCVPVNNPKNYPSSLCALCVGDEQ 540
           GSPAGWDVPVGALIQRGFIRPKDCDVLTAVSEFFNASCVPVNNPKNYPSSLCALCVGDEQ
Sbjct: 481 GSPAGWDVPVGALIQRGFIRPKDCDVLTAVSEFFNASCVPVNNPKNYPSSLCALCVGDEQ 540

Query: 541 GRNKCVGNSQERYYGYRGAFRCLVENAGDVAFVRHTTVFDNTNGHNSEPWAAELRSEDYE 600
           GRNKCVGNSQERYYGYRGAFRCLVENAGDVAFVRHTTVFDNTNGHNSEPWAAELRSEDYE
Sbjct: 541 GRNKCVGNSQERYYGYRGAFRCLVENAGDVAFVRHTTVFDNTNGHNSEPWAAELRSEDYE 600

Query: 601 LLCPNGARAEVSQFAACNLAQIPPHAVMVRPDTNIFTVYGLLDKAQDLFGDDHNKNGFKM 660
           LLCPNGARAEVSQFAACNLAQIPPHAVMVRPDTNIFTVYGLLDKAQDLFGDDHNKNGFKM
Sbjct: 601 LLCPNGARAEVSQFAACNLAQIPPHAVMVRPDTNIFTVYGLLDKAQDLFGDDHNKNGFKM 660

Query: 661 FDSSNYHGQDLLFKDATVRAVPVGEKTTYRGWLGLDYVAALEGMSSQQCSGAAAPAPGAP 720
           FDSSNYHGQDLLFKDATVRAVPVGEKTTYRGWLGLDYVAALEGMSSQQCSGAAAPAPGAP
Sbjct: 661 FDSSNYHGQDLLFKDATVRAVPVGEKTTYRGWLGLDYVAALEGMSSQQCSGAAAPAPGAP 720

Query: 721 LLPLLLPALAARLLPPAL 738
           LLPLLLPALAARLLPPAL
Sbjct: 721 LLPLLLPALAARLLPPAL 738


>gi|16163666 melanoma-associated antigen p97 isoform 2 precursor
           [Homo sapiens]
          Length = 302

 Score =  488 bits (1257), Expect = e-138
 Identities = 237/237 (100%), Positives = 237/237 (100%)

Query: 1   MRGPSGALWLLLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREAGIQPSLLCVRGTSA 60
           MRGPSGALWLLLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREAGIQPSLLCVRGTSA
Sbjct: 1   MRGPSGALWLLLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREAGIQPSLLCVRGTSA 60

Query: 61  DHCVQLIAAQEADAITLDGGAIYEAGKEHGLKPVVGEVYDQEVGTSYYAVAVVRRSSHVT 120
           DHCVQLIAAQEADAITLDGGAIYEAGKEHGLKPVVGEVYDQEVGTSYYAVAVVRRSSHVT
Sbjct: 61  DHCVQLIAAQEADAITLDGGAIYEAGKEHGLKPVVGEVYDQEVGTSYYAVAVVRRSSHVT 120

Query: 121 IDTLKGVKSCHTGINRTVGWNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETS 180
           IDTLKGVKSCHTGINRTVGWNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETS
Sbjct: 121 IDTLKGVKSCHTGINRTVGWNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETS 180

Query: 181 YSESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGDVAFVKHSTVLENTD 237
           YSESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGDVAFVKHSTVLENTD
Sbjct: 181 YSESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGDVAFVKHSTVLENTD 237



 Score =  233 bits (594), Expect = 5e-61
 Identities = 130/288 (45%), Positives = 169/288 (58%), Gaps = 11/288 (3%)

Query: 366 LRWCVLSTPEIQKCGDMAVAFRRQRLKPEIQCVSAKSPQHCMERIQAEQVDAVTLSGEDI 425
           +RWC  S PE  KCG+M+ AFR   ++P + CV   S  HC++ I A++ DA+TL G  I
Sbjct: 23  VRWCATSDPEQHKCGNMSEAFREAGIQPSLLCVRGTSADHCVQLIAAQEADAITLDGGAI 82

Query: 426 YTAGKTYGLVPAAGEHYAPEDSSNSYYVVAVVRRDSSHAFTLDELRGKRSCHAGFGSPAG 485
           Y AGK +GL P  GE Y  ++   SYY VAVVRR SSH  T+D L+G +SCH G     G
Sbjct: 83  YEAGKEHGLKPVVGEVY-DQEVGTSYYAVAVVRR-SSHV-TIDTLKGVKSCHTGINRTVG 139

Query: 486 WDVPVGALIQRGFIRPKDCDVLTAVSEFFNASCVPVNNPKNYPSSLCALCVGDEQGRNKC 545
           W+VPVG L++ G +    CDVL AVS++F  SCVP     +Y  SLC LC GD  G   C
Sbjct: 140 WNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETSYSESLCRLCRGDSSGEGVC 199

Query: 546 VGNSQERYYGYRGAFRCLVENAGDVAFVRHTTVFDNTNGHNS--EPWAAELRSEDYELLC 603
             +  ERYY Y GAFRCL E AGDVAFV+H+TV +NT+   S  + W    RSE+ E  C
Sbjct: 200 DKSPLERYYDYSGAFRCLAEGAGDVAFVKHSTVLENTDESPSRRQTWT---RSEEEEGEC 256

Query: 604 PNGARAEVSQFAACNLAQIPPHAVMVRP-DTNIFTVYGLLDKAQDLFG 650
           P  A  E  +    +  Q    A + RP D +    +G   K++D+ G
Sbjct: 257 P--AHEEARRTMRSSAGQAWKWAPVHRPQDESDKGEFGKRAKSRDMLG 302


>gi|54607120 lactotransferrin precursor [Homo sapiens]
          Length = 710

 Score =  467 bits (1201), Expect = e-131
 Identities = 292/727 (40%), Positives = 409/727 (56%), Gaps = 63/727 (8%)

Query: 6   GALWLLLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREAGIQPSLLCVRGTSADHCVQ 65
           GAL L LA R       V+WCA S PE  KC       R+    P + C++  S   C+Q
Sbjct: 12  GALGLCLAGRR----RSVQWCAVSQPEATKCFQWQRNMRKVR-GPPVSCIKRDSPIQCIQ 66

Query: 66  LIAAQEADAITLDGGAIYEAG-KEHGLKPVVGEVY--DQEVGTSYYAVAVVRRSSHVTID 122
            IA   ADA+TLDGG IYEAG   + L+PV  EVY  +++  T YYAVAVV++     ++
Sbjct: 67  AIAENRADAVTLDGGFIYEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVVKKGGSFQLN 126

Query: 123 TLKGVKSCHTGINRTVGWNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETSYS 182
            L+G+KSCHTG+ RT GWNVP+G L      +     +  AV+ +F  SCVPGA +  + 
Sbjct: 127 ELQGLKSCHTGLRRTAGWNVPIGTLRPFLNWTGPPEPIEAAVARFFSASCVPGADKGQFP 186

Query: 183 ESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGDVAFVKHSTVLENTDGKTLP 242
            +LCRLC G  +GE  C  S  E Y+ YSGAF+CL +GAGDVAF++ STV E+   +   
Sbjct: 187 -NLCRLCAG--TGENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVFEDLSDEAE- 242

Query: 243 SWGQALLSQDFELLCRDGSRADVTEWRQCHLARVPAHAVVVRA-DTDGGLIFRLLNEGQR 301
                    ++ELLC D +R  V +++ CHLARVP+HAVV R+ +     I+ LL + Q 
Sbjct: 243 -------RDEYELLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLRQAQE 295

Query: 302 LFSHEGS-SFQMFSSEAYGQKDLLFKDSTSELVPIATQTYEA-WLGHEYLHAMKGLLCDP 359
            F  + S  FQ+F S + GQKDLLFKDS      +  +     +LG  Y  A++ L    
Sbjct: 296 KFGKDKSPKFQLFGSPS-GQKDLLFKDSAIGFSRVPPRIDSGLYLGSGYFTAIQNLRKSE 354

Query: 360 NRLPPY---LRWCVLSTPEIQKCGDMAVAFRRQRLKPEIQCVSAKSPQHCMERIQAEQVD 416
             +      + WC +   E++KC   +        +  + C SA + + C+  +   + D
Sbjct: 355 EEVAARRARVVWCAVGEQELRKCNQWSGLS-----EGSVTCSSASTTEDCIALVLKGEAD 409

Query: 417 AVTLSGEDIYTAGKTYGLVPAAGEHYAPEDSSN-----------SYYVVAVVRRDSSHAF 465
           A++L G  +YTAGK  GLVP   E+Y  + SS+            Y  VAVVRR S  + 
Sbjct: 410 AMSLDGGYVYTAGKC-GLVPVLAENYKSQQSSDPDPNCVDRPVEGYLAVAVVRR-SDTSL 467

Query: 466 TLDELRGKRSCHAGFGSPAGWDVPVGALIQRGFIRPKDCDVLTAVSEFFNASCVPVNNPK 525
           T + ++GK+SCH      AGW++P+G L    F +   C       E+F+ SC P ++P+
Sbjct: 468 TWNSVKGKKSCHTAVDRTAGWNIPMGLL----FNQTGSCKF----DEYFSQSCAPGSDPR 519

Query: 526 NYPSSLCALCVGDEQGRNKCVGNSQERYYGYRGAFRCLVENAGDVAFVRHTTVFDNTNGH 585
              S+LCALC+GDEQG NKCV NS ERYYGY GAFRCL ENAGDVAFV+  TV  NT+G+
Sbjct: 520 ---SNLCALCIGDEQGENKCVPNSNERYYGYTGAFRCLAENAGDVAFVKDVTVLQNTDGN 576

Query: 586 NSEPWAAELRSEDYELLCPNGARAEVSQFAACNLAQIPPHAVMVRPDTNIFTVYGLLDKA 645
           N+E WA +L+  D+ LLC +G R  V++  +C+LA  P HAV+ R D  +  +  +L   
Sbjct: 577 NNEAWAKDLKLADFALLCLDGKRKPVTEARSCHLAMAPNHAVVSRMD-KVERLKQVLLHQ 635

Query: 646 QDLFGDDHN--KNGFKMFDSSNYHGQDLLFKDATVRAVPVGEKTTYRGWLGLDYVAALEG 703
           Q  FG + +   + F +F S     ++LLF D T     +  KTTY  +LG  YVA +  
Sbjct: 636 QAKFGRNGSDCPDKFCLFQSET---KNLLFNDNTECLARLHGKTTYEKYLGPQYVAGITN 692

Query: 704 MSSQQCS 710
           +  ++CS
Sbjct: 693 L--KKCS 697



 Score =  220 bits (561), Expect = 3e-57
 Identities = 139/357 (38%), Positives = 199/357 (55%), Gaps = 25/357 (7%)

Query: 366 LRWCVLSTPEIQKCGDMAVAFRRQRLKPEIQCVSAKSPQHCMERIQAEQVDAVTLSGEDI 425
           ++WC +S PE  KC       R+ R  P + C+   SP  C++ I   + DAVTL G  I
Sbjct: 25  VQWCAVSQPEATKCFQWQRNMRKVR-GPPVSCIKRDSPIQCIQAIAENRADAVTLDGGFI 83

Query: 426 YTAGKT-YGLVPAAGEHYAPEDSSNS-YYVVAVVRRDSSHAFTLDELRGKRSCHAGFGSP 483
           Y AG   Y L P A E Y  E    + YY VAVV++  S  F L+EL+G +SCH G    
Sbjct: 84  YEAGLAPYKLRPVAAEVYGTERQPRTHYYAVAVVKKGGS--FQLNELQGLKSCHTGLRRT 141

Query: 484 AGWDVPVGALIQRGFIR---PKDCDVLTAVSEFFNASCVPVNNPKNYPSSLCALCVGDEQ 540
           AGW+VP+G L  R F+    P +  +  AV+ FF+ASCVP  +   +P+ LC LC G   
Sbjct: 142 AGWNVPIGTL--RPFLNWTGPPE-PIEAAVARFFSASCVPGADKGQFPN-LCRLCAGT-- 195

Query: 541 GRNKCVGNSQERYYGYRGAFRCLVENAGDVAFVRHTTVFDNTNGHNSEPWAAELRSEDYE 600
           G NKC  +SQE Y+ Y GAF+CL + AGDVAF+R +TVF++ +         E   ++YE
Sbjct: 196 GENKCAFSSQEPYFSYSGAFKCLRDGAGDVAFIRESTVFEDLSD--------EAERDEYE 247

Query: 601 LLCPNGARAEVSQFAACNLAQIPPHAVMVRP-DTNIFTVYGLLDKAQDLFGDDHNKNGFK 659
           LLCP+  R  V +F  C+LA++P HAV+ R  +     ++ LL +AQ+ FG D +   F+
Sbjct: 248 LLCPDNTRKPVDKFKDCHLARVPSHAVVARSVNGKEDAIWNLLRQAQEKFGKDKSPK-FQ 306

Query: 660 MFDSSNYHGQDLLFKDATVRAVPVGEKTTYRGWLGLDYVAALEGMSSQQCSGAAAPA 716
           +F S +   +DLLFKD+ +    V  +     +LG  Y  A++ +   +   AA  A
Sbjct: 307 LFGSPSGQ-KDLLFKDSAIGFSRVPPRIDSGLYLGSGYFTAIQNLRKSEEEVAARRA 362


>gi|4557871 transferrin [Homo sapiens]
          Length = 698

 Score =  462 bits (1190), Expect = e-130
 Identities = 301/741 (40%), Positives = 418/741 (56%), Gaps = 87/741 (11%)

Query: 1   MRGPSGALWL--LLALRTVLGGMEVRWCATSDPEQHKCGNMSEAFREA--GIQPSLLCVR 56
           MR   GAL +  +L L   +    VRWCA S+ E  KC +  +  +       PS+ CV+
Sbjct: 1   MRLAVGALLVCAVLGLCLAVPDKTVRWCAVSEHEATKCQSFRDHMKSVIPSDGPSVACVK 60

Query: 57  GTSADHCVQLIAAQEADAITLDGGAIYEAG-KEHGLKPVVGEVYD--QEVGTSYYAVAVV 113
             S   C++ IAA EADA+TLD G +Y+A    + LKPVV E Y   ++  T YYAVAVV
Sbjct: 61  KASYLDCIRAIAANEADAVTLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVV 120

Query: 114 RRSSHVTIDTLKGVKSCHTGINRTVGWNVPVGYLVESGRLSVMGCDVL-------KAVSD 166
           ++ S   ++ L+G KSCHTG+ R+ GWN+P+G L          CD+        KAV++
Sbjct: 121 KKDSGFQMNQLRGKKSCHTGLGRSAGWNIPIGLLY---------CDLPEPRKPLEKAVAN 171

Query: 167 YFGGSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGDVAF 226
           +F GSC P A  T + + LC+LC G       C  S L +Y+ YSGAF+CL +GAGDVAF
Sbjct: 172 FFSGSCAPCADGTDFPQ-LCQLCPG-------CGCSTLNQYFGYSGAFKCLKDGAGDVAF 223

Query: 227 VKHSTVLENTDGKTLPSWGQALLSQDFELLCRDGSRADVTEWRQCHLARVPAHAVVVRAD 286
           VKHST+ EN   K             +ELLC D +R  V E++ CHLA+VP+H VV R+ 
Sbjct: 224 VKHSTIFENLANKAD--------RDQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSM 275

Query: 287 TDGG---LIFRLLNEGQRLFSHEGSS-FQMFSSEAYGQKDLLFKDSTSELVPIATQT-YE 341
             GG   LI+ LLN+ Q  F  + S  FQ+FSS  +G KDLLFKDS    + +  +   +
Sbjct: 276 --GGKEDLIWELLNQAQEHFGKDKSKEFQLFSSP-HG-KDLLFKDSAHGFLKVPPRMDAK 331

Query: 342 AWLGHEYLHAMKGL---LCD--PNRLPPYLRWCVLSTPEIQKCGDMAVAFRRQRLKPEIQ 396
            +LG+EY+ A++ L    C   P      ++WC LS  E  KC + +V         +I+
Sbjct: 332 MYLGYEYVTAIRNLREGTCPEAPTDECKPVKWCALSHHERLKCDEWSV-----NSVGKIE 386

Query: 397 CVSAKSPQHCMERIQAEQVDAVTLSGEDIYTAGKTYGLVPAAGEHYAPEDSSNS-----Y 451
           CVSA++ + C+ +I   + DA++L G  +Y AGK  GLVP   E+Y   D+        Y
Sbjct: 387 CVSAETTEDCIAKIMNGEADAMSLDGGFVYIAGKC-GLVPVLAENYNKSDNCEDTPEAGY 445

Query: 452 YVVAVVRRDSSHAFTLDELRGKRSCHAGFGSPAGWDVPVGALIQRGFIRPKDCDVLTAVS 511
           + VAVV++ +S   T D L+GK+SCH   G  AGW++P+G L    + +   C       
Sbjct: 446 FAVAVVKKSASD-LTWDNLKGKKSCHTAVGRTAGWNIPMGLL----YNKINHC----RFD 496

Query: 512 EFFNASCVPVNNPKNYPSSLCALCVGDEQGRNKCVGNSQERYYGYRGAFRCLVENAGDVA 571
           EFF+  C P +      SSLC LC+G   G N C  N++E YYGY GAFRCLVE  GDVA
Sbjct: 497 EFFSEGCAPGSKKD---SSLCKLCMGS--GLNLCEPNNKEGYYGYTGAFRCLVEK-GDVA 550

Query: 572 FVRHTTVFDNTNGHNSEPWAAELRSEDYELLCPNGARAEVSQFAACNLAQIPPHAVMVRP 631
           FV+H TV  NT G N +PWA  L  +DYELLC +G R  V ++A C+LA+ P HAV+ R 
Sbjct: 551 FVKHQTVPQNTGGKNPDPWAKNLNEKDYELLCLDGTRKPVEEYANCHLARAPNHAVVTRK 610

Query: 632 DTNIFTVYGLLDKAQDLFGDDHN--KNGFKMFDSSNYHGQDLLFKDATVRAVPVGEKTTY 689
           D     V+ +L + Q LFG +       F +F S     +DLLF+D TV    + ++ TY
Sbjct: 611 DKEA-CVHKILRQQQHLFGSNVTDCSGNFCLFRSET---KDLLFRDDTVCLAKLHDRNTY 666

Query: 690 RGWLGLDYVAALEGMSSQQCS 710
             +LG +YV A+  +  ++CS
Sbjct: 667 EKYLGEEYVKAVGNL--RKCS 685



 Score =  206 bits (524), Expect = 6e-53
 Identities = 130/357 (36%), Positives = 190/357 (53%), Gaps = 38/357 (10%)

Query: 366 LRWCVLSTPEIQKCGDMAVAFRRQRLK-------PEIQCVSAKSPQHCMERIQAEQVDAV 418
           +RWC +S  E  KC        R  +K       P + CV   S   C+  I A + DAV
Sbjct: 25  VRWCAVSEHEATKCQSF-----RDHMKSVIPSDGPSVACVKKASYLDCIRAIAANEADAV 79

Query: 419 TLSGEDIYTAGKT-YGLVPAAGEHY-APEDSSNSYYVVAVVRRDSSHAFTLDELRGKRSC 476
           TL    +Y A      L P   E Y + ED    YY VAVV++DS   F +++LRGK+SC
Sbjct: 80  TLDAGLVYDAYLAPNNLKPVVAEFYGSKEDPQTFYYAVAVVKKDSG--FQMNQLRGKKSC 137

Query: 477 HAGFGSPAGWDVPVGALIQRGFIRPKDCDVLTAVSEFFNASCVPVNNPKNYPSSLCALCV 536
           H G G  AGW++P+G L+      P+   +  AV+ FF+ SC P  +  ++P  LC LC 
Sbjct: 138 HTGLGRSAGWNIPIG-LLYCDLPEPRK-PLEKAVANFFSGSCAPCADGTDFPQ-LCQLCP 194

Query: 537 GDEQGRNKCVGNSQERYYGYRGAFRCLVENAGDVAFVRHTTVFDNTNGHNSEPWAAELRS 596
           G       C  ++  +Y+GY GAF+CL + AGDVAFV+H+T+F+N         A +   
Sbjct: 195 G-------CGCSTLNQYFGYSGAFKCLKDGAGDVAFVKHSTIFENL--------ANKADR 239

Query: 597 EDYELLCPNGARAEVSQFAACNLAQIPPHAVMVRP-DTNIFTVYGLLDKAQDLFGDDHNK 655
           + YELLC +  R  V ++  C+LAQ+P H V+ R        ++ LL++AQ+ FG D +K
Sbjct: 240 DQYELLCLDNTRKPVDEYKDCHLAQVPSHTVVARSMGGKEDLIWELLNQAQEHFGKDKSK 299

Query: 656 NGFKMFDSSNYHGQDLLFKDATVRAVPVGEKTTYRGWLGLDYVAALEGMSSQQCSGA 712
             F++F S   HG+DLLFKD+    + V  +   + +LG +YV A+  +    C  A
Sbjct: 300 E-FQLFSSP--HGKDLLFKDSAHGFLKVPPRMDAKMYLGYEYVTAIRNLREGTCPEA 353


>gi|33695155 hepsin [Homo sapiens]
          Length = 417

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 132 TGINRTVGWNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETSYSESLCRLCRG 191
           TG   T  +    G L E+ R+ ++  DV    +D++G    P      Y E     C+G
Sbjct: 294 TGWGNTQYYGQQAGVLQEA-RVPIISNDVCNG-ADFYGNQIKPKMFCAGYPEGGIDACQG 351

Query: 192 DSSGEGVCDKS 202
           DS G  VC+ S
Sbjct: 352 DSGGPFVCEDS 362


>gi|4504481 hepsin [Homo sapiens]
          Length = 417

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 132 TGINRTVGWNVPVGYLVESGRLSVMGCDVLKAVSDYFGGSCVPGAGETSYSESLCRLCRG 191
           TG   T  +    G L E+ R+ ++  DV    +D++G    P      Y E     C+G
Sbjct: 294 TGWGNTQYYGQQAGVLQEA-RVPIISNDVCNG-ADFYGNQIKPKMFCAGYPEGGIDACQG 351

Query: 192 DSSGEGVCDKS 202
           DS G  VC+ S
Sbjct: 352 DSGGPFVCEDS 362


>gi|145275213 coagulation factor XII precursor [Homo sapiens]
          Length = 615

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 166 DYFGGSCVPGAGETSYSESLCRLCRGDSSGEGVCDKSPLERYYDYSGAFRCLAEGAGD 223
           D  G S +PG     + E     C+GDS G  VC+    ER     G       G GD
Sbjct: 536 DVHGSSILPGMLCAGFLEGGTDACQGDSGGPLVCEDQAAERRLTLQGII-SWGSGCGD 592


>gi|8922913 hypothetical protein LOC55317 [Homo sapiens]
          Length = 200

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 17/132 (12%)

Query: 183 ESLCRLCRGDSSGEGVCDKSP------LERYYDYSGAFRCLAEGAGDVAFVKHSTVLENT 236
           ES+CRL +  +SG    D  P      +  +    GAFR  AE      F +  TV+   
Sbjct: 62  ESMCRL-QQQASGRPPMDLQPQSSDEQVPLHEAPRGAFRLAAENP----FQEPRTVV--- 113

Query: 237 DGKTLPSWGQALLSQDFE-LLCRDGSRADVTEWRQCHLARV-PAHAVVVRADTDGGLIFR 294
               + S G AL+    E LL  +G+   +T     HL  + P+ ++++RAD   G++ R
Sbjct: 114 -WLGVLSLGFALVLDAHENLLLAEGTLRLLTRLLLDHLRLLAPSTSLLLRADRIEGILTR 172

Query: 295 LLNEGQRLFSHE 306
            L  GQ LF ++
Sbjct: 173 FLPHGQLLFLND 184


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,403,211
Number of Sequences: 37866
Number of extensions: 1436158
Number of successful extensions: 3248
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3179
Number of HSP's gapped (non-prelim): 12
length of query: 738
length of database: 18,247,518
effective HSP length: 110
effective length of query: 628
effective length of database: 14,082,258
effective search space: 8843658024
effective search space used: 8843658024
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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