BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|13375664 Na+/K+ transporting ATPase interacting 1 [Homo sapiens] (163 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|13375664 Na+/K+ transporting ATPase interacting 1 [Homo sapiens] 340 3e-94 gi|94158939 T-cell lymphoma breakpoint-associated target 1 [Homo... 241 3e-64 gi|27735000 Na+/K+ transporting ATPase interacting 3 [Homo sapiens] 169 1e-42 gi|226529429 Na+/K+ transporting ATPase interacting 4 [Homo sapi... 164 2e-41 gi|53828744 olfactory receptor, family 11, subfamily G, member 2... 33 0.11 gi|17999520 solute carrier family 32, member 1 [Homo sapiens] 28 2.7 gi|11968059 matrix metalloproteinase 25 preproprotein [Homo sapi... 27 6.0 gi|52218860 olfactory receptor, family 11, subfamily H, member 6... 27 7.8 >gi|13375664 Na+/K+ transporting ATPase interacting 1 [Homo sapiens] Length = 163 Score = 340 bits (872), Expect = 3e-94 Identities = 163/163 (100%), Positives = 163/163 (100%) Query: 1 MAVILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLH 60 MAVILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLH Sbjct: 1 MAVILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLH 60 Query: 61 RSWWMENGPGCLVTPVLNSRLALEDHHVISVTGCLLDYPYIEALSSALQIFLALFGFVFA 120 RSWWMENGPGCLVTPVLNSRLALEDHHVISVTGCLLDYPYIEALSSALQIFLALFGFVFA Sbjct: 61 RSWWMENGPGCLVTPVLNSRLALEDHHVISVTGCLLDYPYIEALSSALQIFLALFGFVFA 120 Query: 121 CYVSKVFLEEEDSFDFIGGFDSYGYQAPQKTSHLQLQPLYTSG 163 CYVSKVFLEEEDSFDFIGGFDSYGYQAPQKTSHLQLQPLYTSG Sbjct: 121 CYVSKVFLEEEDSFDFIGGFDSYGYQAPQKTSHLQLQPLYTSG 163 >gi|94158939 T-cell lymphoma breakpoint-associated target 1 [Homo sapiens] Length = 208 Score = 241 bits (614), Expect = 3e-64 Identities = 112/161 (69%), Positives = 128/161 (79%), Gaps = 1/161 (0%) Query: 3 VILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLHRS 62 VILG+FGT+QYR RY+ YA WLVLWV WN F+ICFYLE G LS++ D I+TFN S+HRS Sbjct: 47 VILGLFGTIQYRPRYITGYAVWLVLWVTWNVFVICFYLEAGDLSKETDLILTFNISMHRS 106 Query: 63 WWMENGPGCLVTPVLNS-RLALEDHHVISVTGCLLDYPYIEALSSALQIFLALFGFVFAC 121 WWMENGPGC VT V + A EDH I+V+GCLL+Y YIE S+LQI LAL GF++AC Sbjct: 107 WWMENGPGCTVTSVTPAPDWAPEDHRYITVSGCLLEYQYIEVAHSSLQIVLALAGFIYAC 166 Query: 122 YVSKVFLEEEDSFDFIGGFDSYGYQAPQKTSHLQLQPLYTS 162 YV K EEEDSFDFIGGFDSYGYQ PQKTSHLQLQP+Y S Sbjct: 167 YVVKCITEEEDSFDFIGGFDSYGYQGPQKTSHLQLQPMYMS 207 >gi|27735000 Na+/K+ transporting ATPase interacting 3 [Homo sapiens] Length = 197 Score = 169 bits (427), Expect = 1e-42 Identities = 76/136 (55%), Positives = 105/136 (77%), Gaps = 4/136 (2%) Query: 1 MAVILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLH 60 + VILG+FGT+QYR RY+++Y W LWV WN FIICFYLEVG LS+D D +MTFN S+H Sbjct: 45 IVVILGLFGTIQYRPRYIMVYTVWTALWVTWNVFIICFYLEVGGLSKDTD-LMTFNISVH 103 Query: 61 RSWWMENGPGCL--VTPVLNSRLALEDHHVISVTGCLLDYPYIEALSSALQIFLALFGFV 118 RSWW E+GPGC+ V P ++ ++D+ +SVTGC++D+ Y+E + SA+QI L+L GFV Sbjct: 104 RSWWREHGPGCVRRVLPP-SAHGMMDDYTYVSVTGCIVDFQYLEVIHSAVQILLSLVGFV 162 Query: 119 FACYVSKVFLEEEDSF 134 +ACYV + +EEED++ Sbjct: 163 YACYVISISMEEEDTY 178 >gi|226529429 Na+/K+ transporting ATPase interacting 4 [Homo sapiens] Length = 208 Score = 164 bits (416), Expect = 2e-41 Identities = 85/160 (53%), Positives = 105/160 (65%), Gaps = 3/160 (1%) Query: 3 VILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLHRS 62 VILG+FGT+QYR RY+++Y W +WV WN FIICFYLEVG L +D + ++TF+ S HRS Sbjct: 47 VILGLFGTIQYRLRYVMVYTLWAAVWVTWNVFIICFYLEVGGLLKDSE-LLTFSLSRHRS 105 Query: 63 WWMENGPGCLVTPVLNSRL-ALEDHHVISVTGCLLDYPYIEALSSALQIFLALFGFVFAC 121 WW E PGCL V L A ++S GC L+ Y+EAL S LQI +AL GFV C Sbjct: 106 WWRERWPGCLHEEVPAVGLGAPHGQALVSGAGCALEPSYVEALHSCLQILIALLGFVCGC 165 Query: 122 YVSKVFLEEEDSFDFIGGFDSYG-YQAPQKTSHLQLQPLY 160 V VF EEEDSFDFIGGFD + Y +K S L + +Y Sbjct: 166 QVVSVFTEEEDSFDFIGGFDPFPLYHVNEKPSSLLSKQVY 205 >gi|53828744 olfactory receptor, family 11, subfamily G, member 2 [Homo sapiens] Length = 345 Score = 33.1 bits (74), Expect = 0.11 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 71 CLVTPVLNSRLA--LEDHHVISVTGCLLDYPYIEALSSALQIFLALFGF 117 C VT + S LA L D +IS +GC L + + +L S FLA+ F Sbjct: 110 CYVTSTVPSMLANFLSDTKIISFSGCFLQFYFFFSLGSTECFFLAVMAF 158 >gi|17999520 solute carrier family 32, member 1 [Homo sapiens] Length = 525 Score = 28.5 bits (62), Expect = 2.7 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Query: 95 LLDYPYIEALSSALQIFLALFGFVFACYVSKVFL----EEEDSFDFIGGFDSY 143 +L PY L +FL +F V CY K+ + EE + + + DSY Sbjct: 134 VLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGEVVRVRDSY 186 >gi|11968059 matrix metalloproteinase 25 preproprotein [Homo sapiens] Length = 562 Score = 27.3 bits (59), Expect = 6.0 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 5/65 (7%) Query: 4 ILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLHRSW 63 +LG+ G V+ R RY + + W + W + + + QLSQ+ + + +W Sbjct: 95 VLGVAGLVRRRRRYALSGSVWKKRTLTWR---VRSFPQSSQLSQET--VRVLMSYALMAW 149 Query: 64 WMENG 68 ME+G Sbjct: 150 GMESG 154 >gi|52218860 olfactory receptor, family 11, subfamily H, member 6 [Homo sapiens] Length = 330 Score = 26.9 bits (58), Expect = 7.8 Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 9/116 (7%) Query: 3 VILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLHRS 62 V+LG G + +S + +L + N I+C +++ + +I+ N + Sbjct: 31 VLLGFHGQREMQSCFFSFILVLYLLTLLGNGAIVCA-VKLDRRLHTPMYILLGNFAFLEI 89 Query: 63 WWMENG-PGCLVTPVLNSRLALEDHHVISVTGCLLDYPYIEALSSALQIFLALFGF 117 W++ + P LV L + IS +GC L + + +L + FL++ + Sbjct: 90 WYISSTVPNMLVN-------ILSEIKTISFSGCFLQFYFFFSLGTTECFFLSVMAY 138 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.328 0.143 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,203,491 Number of Sequences: 37866 Number of extensions: 241935 Number of successful extensions: 588 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 576 Number of HSP's gapped (non-prelim): 10 length of query: 163 length of database: 18,247,518 effective HSP length: 94 effective length of query: 69 effective length of database: 14,688,114 effective search space: 1013479866 effective search space used: 1013479866 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.