Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 46409314

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|46409314 P antigen family, member 2 [Homo sapiens]
         (111 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46409314 P antigen family, member 2 [Homo sapiens]                 222   4e-59
gi|62632767 P antigen family, member 2B [Homo sapiens]                210   2e-55
gi|61743936 P antigen family, member 5 isoform 2 [Homo sapiens]       180   2e-46
gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens]       180   2e-46
gi|62988344 P antigen family, member 3 (prostate associated) [Ho...    82   9e-17
gi|5901986 G antigen, family C, 1 [Homo sapiens]                       67   2e-12
gi|239755865 PREDICTED: similar to XAGE-3 protein [Homo sapiens]       67   4e-12
gi|239750353 PREDICTED: hypothetical protein XP_002347379 [Homo ...    67   4e-12
gi|239744657 PREDICTED: hypothetical protein XP_002343217 [Homo ...    67   4e-12
gi|19747271 XAGE-3 protein [Homo sapiens]                              65   2e-11
gi|19747269 XAGE-3 protein [Homo sapiens]                              65   2e-11
gi|19747273 X antigen family, member 5 [Homo sapiens]                  61   2e-10
gi|118601000 X antigen family, member 2-like [Homo sapiens]            57   2e-09
gi|19747283 XAGE-2 protein [Homo sapiens]                              57   2e-09
gi|58761528 P antigen family, member 1 [Homo sapiens]                  47   3e-06
gi|150010546 G antigen 10 [Homo sapiens]                               45   1e-05
gi|148491064 G antigen 12G [Homo sapiens]                              40   3e-04
gi|148529018 G antigen 2B [Homo sapiens]                               40   3e-04
gi|11024641 G antigen 7 [Homo sapiens]                                 40   3e-04
gi|148491078 G antigen 12F [Homo sapiens]                              40   3e-04
gi|4503889 G antigen 12I [Homo sapiens]                                40   3e-04
gi|4503879 G antigen 2 [Homo sapiens]                                  40   3e-04
gi|98985822 G antigen 1 isoform 2 [Homo sapiens]                       40   4e-04
gi|148491076 G antigen 2D [Homo sapiens]                               40   5e-04
gi|4503887 G antigen 6 [Homo sapiens]                                  40   5e-04
gi|4503885 G antigen 5 [Homo sapiens]                                  40   5e-04
gi|4503883 G antigen 4 [Homo sapiens]                                  40   5e-04
gi|7705379 G antigen 8 [Homo sapiens]                                  40   5e-04
gi|148491101 G antigen 12C [Homo sapiens]                              39   7e-04
gi|187608823 G antigen 12D [Homo sapiens]                              39   7e-04

>gi|46409314 P antigen family, member 2 [Homo sapiens]
          Length = 111

 Score =  222 bits (566), Expect = 4e-59
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   MSELLRARSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAV 60
           MSELLRARSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAV
Sbjct: 1   MSELLRARSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAV 60

Query: 61  PAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111
           PAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP
Sbjct: 61  PAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111


>gi|62632767 P antigen family, member 2B [Homo sapiens]
          Length = 111

 Score =  210 bits (534), Expect = 2e-55
 Identities = 104/111 (93%), Positives = 106/111 (95%)

Query: 1   MSELLRARSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAV 60
           MSE +R RSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIEN+  
Sbjct: 1   MSEHVRTRSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENEGA 60

Query: 61  PAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111
           PA QGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP
Sbjct: 61  PAVQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111


>gi|61743936 P antigen family, member 5 isoform 2 [Homo sapiens]
          Length = 110

 Score =  180 bits (457), Expect = 2e-46
 Identities = 88/103 (85%), Positives = 94/103 (91%)

Query: 8   RSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQGPD 67
           RSQSSERGNDQESSQPVG VIVQ+PTEEKRQEEEPPTDNQGIAPSGEI+N+  PA QG D
Sbjct: 7   RSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAPAVQGTD 66

Query: 68  MEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQ 110
           +EAFQQELALLKIED PGDGPDVREG +PTFD TKVLEAG+ Q
Sbjct: 67  VEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 109


>gi|19743940 P antigen family, member 5 isoform 1 [Homo sapiens]
          Length = 130

 Score =  180 bits (457), Expect = 2e-46
 Identities = 88/103 (85%), Positives = 94/103 (91%)

Query: 8   RSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQGPD 67
           RSQSSERGNDQESSQPVG VIVQ+PTEEKRQEEEPPTDNQGIAPSGEI+N+  PA QG D
Sbjct: 27  RSQSSERGNDQESSQPVGPVIVQQPTEEKRQEEEPPTDNQGIAPSGEIKNEGAPAVQGTD 86

Query: 68  MEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQ 110
           +EAFQQELALLKIED PGDGPDVREG +PTFD TKVLEAG+ Q
Sbjct: 87  VEAFQQELALLKIEDAPGDGPDVREGTLPTFDPTKVLEAGEGQ 129


>gi|62988344 P antigen family, member 3 (prostate associated) [Homo
           sapiens]
          Length = 113

 Score = 82.0 bits (201), Expect = 9e-17
 Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 2/112 (1%)

Query: 1   MSELLRARSQSSERGNDQESSQPVGSVIVQE-PTEEKRQEEEPPTDNQGIAPSGEIENQA 59
           MS   R RS+S ER +DQ+S+ PVG+V+ QE P+ ++ Q+EEPP ++Q   P  E +  A
Sbjct: 1   MSGHQRTRSRSRERRDDQDSNHPVGAVVAQELPSNDQLQQEEPPIESQDYTPGQERDEGA 60

Query: 60  VPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111
           +  FQ   + A+  EL   K   E GDGP+V+   +P  +  K+ EAG+ QP
Sbjct: 61  LD-FQVLGLAAYLWELTRSKTGGERGDGPNVKGEFLPNLEPVKIPEAGEGQP 111


>gi|5901986 G antigen, family C, 1 [Homo sapiens]
          Length = 102

 Score = 67.4 bits (163), Expect = 2e-12
 Identities = 45/106 (42%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 6   RARSQSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQG 65
           R RS+S  RG+ QE+   V  V   E      Q+EEPPTDNQ I P  E E    P  + 
Sbjct: 4   RVRSRSRGRGDGQEAPDVVAFVAPGES-----QQEEPPTDNQDIEPGQEREG--TPPIEE 56

Query: 66  PDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111
             +E   QE+ L K   E GDG DV+E   P     K  EAGD QP
Sbjct: 57  RKVEGDCQEMDLEKTRSERGDGSDVKEKTPPNPKHAKTKEAGDGQP 102


>gi|239755865 PREDICTED: similar to XAGE-3 protein [Homo sapiens]
          Length = 106

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 14  RGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQ 73
           R N QE+S+PVG V+VQ+P++E+ Q+EEP T+++ + P G+  ++A P  QGP +EA  Q
Sbjct: 24  RQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAAPKSQGPGLEADIQ 82

Query: 74  ELALLKIEDEPGDGPDVR 91
           E++  K   + GD P V+
Sbjct: 83  EVSQAKTGGKWGDDPYVK 100


>gi|239750353 PREDICTED: hypothetical protein XP_002347379 [Homo
           sapiens]
          Length = 106

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 14  RGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQ 73
           R N QE+S+PVG V+VQ+P++E+ Q+EEP T+++ + P G+  ++A P  QGP +EA  Q
Sbjct: 24  RQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAAPKSQGPGLEADIQ 82

Query: 74  ELALLKIEDEPGDGPDVR 91
           E++  K   + GD P V+
Sbjct: 83  EVSQAKTGGKWGDDPYVK 100


>gi|239744657 PREDICTED: hypothetical protein XP_002343217 [Homo
           sapiens]
          Length = 106

 Score = 66.6 bits (161), Expect = 4e-12
 Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 14  RGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQ 73
           R N QE+S+PVG V+VQ+P++E+ Q+EEP T+++ + P G+  ++A P  QGP +EA  Q
Sbjct: 24  RQNVQETSKPVGPVVVQQPSDEQPQKEEPLTESKDVMP-GQERDEAAPKSQGPGLEADIQ 82

Query: 74  ELALLKIEDEPGDGPDVR 91
           E++  K   + GD P V+
Sbjct: 83  EVSQAKTGGKWGDDPYVK 100


>gi|19747271 XAGE-3 protein [Homo sapiens]
          Length = 111

 Score = 64.7 bits (156), Expect = 2e-11
 Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 6/108 (5%)

Query: 8   RSQSSERGNDQESSQP---VGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIE-NQAVPAF 63
           R +S+ R   + S  P   +G ++  EP +E+ Q+EEPPT+++  AP  E E +Q     
Sbjct: 4   RGRSTYRPRPRRSVPPPELIGPML--EPGDEEPQQEEPPTESRDPAPGQEREEDQGAAET 61

Query: 64  QGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111
           Q PD+EA  QEL+  K   E G+GPD +  I+P  +  K+ E GD QP
Sbjct: 62  QVPDLEADLQELSQSKTGGECGNGPDDQGKILPKSEQFKMPEGGDRQP 109


>gi|19747269 XAGE-3 protein [Homo sapiens]
          Length = 111

 Score = 64.7 bits (156), Expect = 2e-11
 Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 6/108 (5%)

Query: 8   RSQSSERGNDQESSQP---VGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIE-NQAVPAF 63
           R +S+ R   + S  P   +G ++  EP +E+ Q+EEPPT+++  AP  E E +Q     
Sbjct: 4   RGRSTYRPRPRRSVPPPELIGPML--EPGDEEPQQEEPPTESRDPAPGQEREEDQGAAET 61

Query: 64  QGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111
           Q PD+EA  QEL+  K   E G+GPD +  I+P  +  K+ E GD QP
Sbjct: 62  QVPDLEADLQELSQSKTGGECGNGPDDQGKILPKSEQFKMPEGGDRQP 109


>gi|19747273 X antigen family, member 5 [Homo sapiens]
          Length = 108

 Score = 60.8 bits (146), Expect = 2e-10
 Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 3/92 (3%)

Query: 21  SQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIEN-QAVPAFQGPDMEAFQQELALLK 79
           +Q VG ++  EP+  + Q+EEPPT++Q   P  + E+ Q     Q P++EA  QEL+  K
Sbjct: 17  AQLVGPML--EPSVPEPQQEEPPTESQDHTPGQKREDDQGAAEIQVPNLEADLQELSQSK 74

Query: 80  IEDEPGDGPDVREGIMPTFDLTKVLEAGDAQP 111
             DE GD PDV+  I+P  +  K+ E G+ +P
Sbjct: 75  TGDECGDSPDVQGKILPKSEQFKMPEGGEGKP 106


>gi|118601000 X antigen family, member 2-like [Homo sapiens]
          Length = 111

 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 6/107 (5%)

Query: 8   RSQSSERGNDQESSQP---VGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIEN-QAVPAF 63
           R +S+ R   + S QP   +G+++  EPT+E+ +EE+PPT ++   P  + E+ Q     
Sbjct: 4   RGRSTYRPRPRRSLQPPELIGAML--EPTDEEPKEEKPPTKSRNPTPDQKREDDQGAAEI 61

Query: 64  QGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQ 110
           Q PD+EA  QEL   K  D    G DV+  I+P  +  K+ EAG+ +
Sbjct: 62  QVPDLEADLQELCQTKTGDGCEGGTDVKGKILPKAEHFKMPEAGEGK 108


>gi|19747283 XAGE-2 protein [Homo sapiens]
          Length = 111

 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 6/107 (5%)

Query: 8   RSQSSERGNDQESSQP---VGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEIEN-QAVPAF 63
           R +S+ R   + S QP   +G+++  EPT+E+ +EE+PPT ++   P  + E+ Q     
Sbjct: 4   RGRSTYRPRPRRSLQPPELIGAML--EPTDEEPKEEKPPTKSRNPTPDQKREDDQGAAEI 61

Query: 64  QGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQ 110
           Q PD+EA  QEL   K  D    G DV+  I+P  +  K+ EAG+ +
Sbjct: 62  QVPDLEADLQELCQTKTGDGCEGGTDVKGKILPKAEHFKMPEAGEGK 108


>gi|58761528 P antigen family, member 1 [Homo sapiens]
          Length = 146

 Score = 47.4 bits (111), Expect = 3e-06
 Identities = 25/62 (40%), Positives = 35/62 (56%)

Query: 30 QEPTEEKRQEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPD 89
          +E ++E+  E E PT +Q   P+ E E++   A QG + EA  QEL   K   E GDGPD
Sbjct: 21 EESSDEQPDEVESPTQSQDSTPAEEREDEGASAAQGQEPEADSQELVQPKTGCELGDGPD 80

Query: 90 VR 91
           +
Sbjct: 81 TK 82



 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 27/127 (21%)

Query: 10  QSSERGNDQESSQPVGSVIVQEPTEEKRQEEEPPTDNQGIAPSGEI-------------- 55
           +SSE  +D++  +       Q+ T  + +E+E  +  QG  P  +               
Sbjct: 18  ESSEESSDEQPDEVESPTQSQDSTPAEEREDEGASAAQGQEPEADSQELVQPKTGCELGD 77

Query: 56  ------------ENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPTFDLTKV 103
                       E   +PA +GP+ EA  QE    K   E GDGPDV+E  +P  +  K 
Sbjct: 78  GPDTKRVCLRNEEQMKLPA-EGPEPEADSQEQVHPKTGCERGDGPDVQELGLPNPEEVKT 136

Query: 104 LEAGDAQ 110
            E  + Q
Sbjct: 137 PEEDEGQ 143


>gi|150010546 G antigen 10 [Homo sapiens]
          Length = 116

 Score = 45.4 bits (106), Expect = 1e-05
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 19  ESSQPVGSVIVQEPTEEKR----QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQE 74
           E  + +G ++ ++ ++E      +E EP T  Q  A + E E++   A QGP  EA  QE
Sbjct: 18  EPPEMIGPMLPEQFSDEVEPATPEEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQE 77

Query: 75  LALLKIEDEPGDGPDVREGIMPTFDLTKVLEAGDAQ 110
               K   E GDGPD +E  +P  +  K  E G+ Q
Sbjct: 78  QVHPKTGCECGDGPDGQEMGLPNPEEVKRPEEGEKQ 113


>gi|148491064 G antigen 12G [Homo sapiens]
          Length = 117

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 42  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPN 101

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 102 PEEVKTPEEGEKQ 114


>gi|148529018 G antigen 2B [Homo sapiens]
          Length = 116

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 41  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPN 100

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 101 PEEVKTPEEGEKQ 113


>gi|11024641 G antigen 7 [Homo sapiens]
          Length = 117

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 42  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPN 101

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 102 PEEVKTPEEGEKQ 114


>gi|148491078 G antigen 12F [Homo sapiens]
          Length = 117

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 42  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPN 101

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 102 PEEVKTPEEGEKQ 114


>gi|4503889 G antigen 12I [Homo sapiens]
          Length = 117

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 42  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPN 101

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 102 PEEVKTPEEGEKQ 114


>gi|4503879 G antigen 2 [Homo sapiens]
          Length = 116

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 41  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPN 100

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 101 PEEVKTPEEGEKQ 113


>gi|98985822 G antigen 1 isoform 2 [Homo sapiens]
          Length = 117

 Score = 40.0 bits (92), Expect = 4e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 42  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPN 101

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 102 PEEVKTPEEGEGQ 114


>gi|148491076 G antigen 2D [Homo sapiens]
          Length = 116

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 41  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPN 100

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 101 PEEVKTPEEGEKQ 113


>gi|4503887 G antigen 6 [Homo sapiens]
          Length = 117

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 42  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEVDPPN 101

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 102 PEEVKTPEEGEKQ 114


>gi|4503885 G antigen 5 [Homo sapiens]
          Length = 117

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 42  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPN 101

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 102 PEEVKTPEEGEKQ 114


>gi|4503883 G antigen 4 [Homo sapiens]
          Length = 117

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 42  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPN 101

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 102 PEEVKTPEEGEKQ 114


>gi|7705379 G antigen 8 [Homo sapiens]
          Length = 116

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 41  EEGEPATQRQDPAAAQEGEDEGASAGQGPKPEADSQEQGHPQTGCECEDGPDGQEMDPPN 100

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 101 PEEVKTPEEGEKQ 113


>gi|148491101 G antigen 12C [Homo sapiens]
          Length = 117

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 42  EEGEPATQCQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPN 101

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 102 PEEVKTPEEGEKQ 114


>gi|187608823 G antigen 12D [Homo sapiens]
          Length = 117

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 27/73 (36%), Positives = 35/73 (47%)

Query: 38  QEEEPPTDNQGIAPSGEIENQAVPAFQGPDMEAFQQELALLKIEDEPGDGPDVREGIMPT 97
           +E EP T  Q  A + E E++   A QGP  EA  QE    +   E  DGPD +E   P 
Sbjct: 42  EEGEPATQCQDPAAAQEGEDEGASAGQGPKPEAHSQEQGHPQTGCECEDGPDGQEMDPPN 101

Query: 98  FDLTKVLEAGDAQ 110
            +  K  E G+ Q
Sbjct: 102 PEEVKTPEEGEKQ 114


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.305    0.128    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,085,373
Number of Sequences: 37866
Number of extensions: 260803
Number of successful extensions: 1012
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 809
Number of HSP's gapped (non-prelim): 254
length of query: 111
length of database: 18,247,518
effective HSP length: 81
effective length of query: 30
effective length of database: 15,180,372
effective search space: 455411160
effective search space used: 455411160
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press