BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|108860686 prolyl endopeptidase-like isoform E [Homo sapiens] (665 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|108860686 prolyl endopeptidase-like isoform E [Homo sapiens] 1379 0.0 gi|108860692 prolyl endopeptidase-like isoform D [Homo sapiens] 1221 0.0 gi|70778815 prolyl endopeptidase-like isoform C [Homo sapiens] 713 0.0 gi|41349456 prolyl endopeptidase [Homo sapiens] 97 4e-20 gi|24308223 hypothetical protein LOC57577 [Homo sapiens] 35 0.29 gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 31 3.2 gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 31 3.2 gi|116686122 kinesin family member 4 [Homo sapiens] 30 7.2 >gi|108860686 prolyl endopeptidase-like isoform E [Homo sapiens] Length = 665 Score = 1379 bits (3568), Expect = 0.0 Identities = 665/665 (100%), Positives = 665/665 (100%) Query: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE Sbjct: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60 Query: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF Sbjct: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120 Query: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE Sbjct: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180 Query: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR Sbjct: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240 Query: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL Sbjct: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300 Query: 301 YYVEHRDDELYILTNVGEPTEFKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKF 360 YYVEHRDDELYILTNVGEPTEFKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKF Sbjct: 301 YYVEHRDDELYILTNVGEPTEFKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKF 360 Query: 361 AEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAY 420 AEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAY Sbjct: 361 AEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAY 420 Query: 421 GMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTL 480 GMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTL Sbjct: 421 GMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTL 480 Query: 481 HGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLE 540 HGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLE Sbjct: 481 HGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLE 540 Query: 541 ELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKE 600 ELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKE Sbjct: 541 ELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKE 600 Query: 601 AIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLK 660 AIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLK Sbjct: 601 AIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLK 660 Query: 661 KYLKF 665 KYLKF Sbjct: 661 KYLKF 665 >gi|108860692 prolyl endopeptidase-like isoform D [Homo sapiens] Length = 661 Score = 1221 bits (3158), Expect = 0.0 Identities = 612/675 (90%), Positives = 622/675 (92%), Gaps = 24/675 (3%) Query: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE Sbjct: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60 Query: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF Sbjct: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120 Query: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE Sbjct: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180 Query: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR Sbjct: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240 Query: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL Sbjct: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300 Query: 301 YYVEHRDDELYILTNVGEPTEFKLPPWACGFIMDTNSD-PKNCPFQLCSPIRPPKYYTYK 359 YYVEHRDDELYILTNVGEPTEFKL M T +D P + L ++ K Sbjct: 301 YYVEHRDDELYILTNVGEPTEFKL--------MRTAADTPAIMNWDLFFTMK----RNTK 348 Query: 360 FAEGKLFEETGHEDPITKTSRVLRLEA---------KSKDGKLVPMTVFHKTDSEDLQKK 410 + +F++ H K S +L + KDGKLVPMTVFHKTDSEDLQKK Sbjct: 349 VIDLDMFKD--HCVLFLKHSNLLYVNVIGLADDSVRSLKDGKLVPMTVFHKTDSEDLQKK 406 Query: 411 PLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGL 470 PLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGL Sbjct: 407 PLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGL 466 Query: 471 ADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTM 530 ADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTM Sbjct: 467 ADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTM 526 Query: 531 MDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKG 590 MDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKG Sbjct: 527 MDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKG 586 Query: 591 IVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGL 650 IVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGL Sbjct: 587 IVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGL 646 Query: 651 DSTSVFEDLKKYLKF 665 DSTSVFEDLKKYLKF Sbjct: 647 DSTSVFEDLKKYLKF 661 >gi|70778815 prolyl endopeptidase-like isoform C [Homo sapiens] Length = 727 Score = 713 bits (1840), Expect = 0.0 Identities = 343/343 (100%), Positives = 343/343 (100%) Query: 323 KLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVL 382 KLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVL Sbjct: 385 KLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVL 444 Query: 383 RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL 442 RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL Sbjct: 445 RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL 504 Query: 443 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL 502 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL Sbjct: 505 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL 564 Query: 503 AGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC 562 AGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC Sbjct: 565 AGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC 624 Query: 563 PYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDI 622 PYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDI Sbjct: 625 PYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDI 684 Query: 623 QPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF 665 QPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF Sbjct: 685 QPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF 727 Score = 673 bits (1737), Expect = 0.0 Identities = 324/324 (100%), Positives = 324/324 (100%) Query: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE Sbjct: 1 MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60 Query: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF Sbjct: 61 LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120 Query: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE Sbjct: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180 Query: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR Sbjct: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240 Query: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL Sbjct: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300 Query: 301 YYVEHRDDELYILTNVGEPTEFKL 324 YYVEHRDDELYILTNVGEPTEFKL Sbjct: 301 YYVEHRDDELYILTNVGEPTEFKL 324 >gi|41349456 prolyl endopeptidase [Homo sapiens] Length = 710 Score = 97.4 bits (241), Expect = 4e-20 Identities = 92/374 (24%), Positives = 155/374 (41%), Gaps = 37/374 (9%) Query: 237 DNKRNERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRI 296 DN E Y + + F F + + INI + E S W VL+ + Sbjct: 284 DNFEGEYDYVTNEGTVFTFKTNRQSPNYRVINIDFRDPEE-------SKWK--VLVPEHE 334 Query: 297 HGVLYYVE------------HRDDELYILTNVGEPTEFKLPPWACGFIMDTNSDPKNCP- 343 VL ++ H + L ++ K P G I+ + K+ Sbjct: 335 KDVLEWIACVRSNFLVLCYLHDVKNILQLHDLTTGALLKTFPLDVGSIVGYSGQKKDTEI 394 Query: 344 -FQLCSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTV 398 +Q S + P Y T + E ++F E + + +++ SKDG +PM + Sbjct: 395 FYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFI 454 Query: 399 FHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQW 457 HK + P ++ YG + + + N+ R + V G ILA ++RGGGE G W Sbjct: 455 VHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVANIRGGGEYGETW 514 Query: 458 HADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAV 517 H G L K N D + + L +G++ P T+ S GG+L A N P+L V Sbjct: 515 HKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCV 574 Query: 518 TLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HY 572 + +D+L T + ++G S ++H ++ +Y P N+K P+ Y Sbjct: 575 IAQVGVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLVKYSPLHNVKLPEADDIQY 630 Query: 573 PSIHITAYENDERV 586 PS+ + ++D+RV Sbjct: 631 PSMLLLTADHDDRV 644 >gi|24308223 hypothetical protein LOC57577 [Homo sapiens] Length = 936 Score = 34.7 bits (78), Expect = 0.29 Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 18/169 (10%) Query: 73 KDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGFVYYQEGCCLVRS 132 K+ Q KQ+ + L M + +L + + EY+ I +K F+ E CLV+ Sbjct: 177 KENQDKKQQKDPRLTMEMRHKQVKENRLRREKELEYQRIEKTLKKSAFL---EAQCLVQE 233 Query: 133 KDE----EADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSEASTCVIIK 188 + + EA + E+ E +KL + I+ R + K + E+S+ S Sbjct: 234 EKKRKALEAKKEEEEI--QREMVKLRREIIERRRTVKAAWKIEKKRQEENSQNS------ 285 Query: 189 LSDQPVMEASFPNVSSFEWVKDEED--EDVLFYTFQRNLRCHDVYRATF 235 S++ + +++ + VK+ + ++VL TF+ N +C Y A + Sbjct: 286 -SEKVMFQSTHILPDEEKMVKERKRKLKEVLIQTFKENQQCQKRYFAAW 333 >gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sapiens] Length = 1843 Score = 31.2 bits (69), Expect = 3.2 Identities = 23/121 (19%), Positives = 57/121 (47%), Gaps = 17/121 (14%) Query: 1 MQQKTKLFLQALKYSIPHLGKC-----MQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNK 55 ++++ K+ +++K + L K K+ L HY ++ + +HL K Sbjct: 585 IEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEK----- 639 Query: 56 PKISELARNIPSRSFSCKDLQPVKQEN------EKPLPENMDAFEKVRTKLETQPQEEYE 109 + L + I + +C+ ++ ++QEN + L + +D+F+ + +LE+ +E + Sbjct: 640 -ENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQ 698 Query: 110 I 110 + Sbjct: 699 L 699 >gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo sapiens] Length = 1870 Score = 31.2 bits (69), Expect = 3.2 Identities = 23/121 (19%), Positives = 57/121 (47%), Gaps = 17/121 (14%) Query: 1 MQQKTKLFLQALKYSIPHLGKC-----MQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNK 55 ++++ K+ +++K + L K K+ L HY ++ + +HL K Sbjct: 585 IEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEK----- 639 Query: 56 PKISELARNIPSRSFSCKDLQPVKQEN------EKPLPENMDAFEKVRTKLETQPQEEYE 109 + L + I + +C+ ++ ++QEN + L + +D+F+ + +LE+ +E + Sbjct: 640 -ENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQ 698 Query: 110 I 110 + Sbjct: 699 L 699 >gi|116686122 kinesin family member 4 [Homo sapiens] Length = 1232 Score = 30.0 bits (66), Expect = 7.2 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 13/79 (16%) Query: 45 KYHLTKCLQNKPKISELARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQP 104 KY + + + +K ++S+L ++ SC D+Q K L E + F ++ T+L+ Sbjct: 868 KYLIGELVSSKIQVSKLESSLKQSKTSCADMQ-------KMLFEERNHFAEIETELQA-- 918 Query: 105 QEEYEIINVEVKHGGFVYY 123 E++ +E +H V Y Sbjct: 919 ----ELVRMEQQHQEKVLY 933 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.137 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,212,673 Number of Sequences: 37866 Number of extensions: 1312828 Number of successful extensions: 3080 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 3072 Number of HSP's gapped (non-prelim): 10 length of query: 665 length of database: 18,247,518 effective HSP length: 109 effective length of query: 556 effective length of database: 14,120,124 effective search space: 7850788944 effective search space used: 7850788944 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.