Guide to the Human Genome
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Search of human proteins with 108860686

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|108860686 prolyl endopeptidase-like isoform E [Homo sapiens]
         (665 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|108860686 prolyl endopeptidase-like isoform E [Homo sapiens]      1379   0.0  
gi|108860692 prolyl endopeptidase-like isoform D [Homo sapiens]      1221   0.0  
gi|70778815 prolyl endopeptidase-like isoform C [Homo sapiens]        713   0.0  
gi|41349456 prolyl endopeptidase [Homo sapiens]                        97   4e-20
gi|24308223 hypothetical protein LOC57577 [Homo sapiens]               35   0.29 
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa...    31   3.2  
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s...    31   3.2  
gi|116686122 kinesin family member 4 [Homo sapiens]                    30   7.2  

>gi|108860686 prolyl endopeptidase-like isoform E [Homo sapiens]
          Length = 665

 Score = 1379 bits (3568), Expect = 0.0
 Identities = 665/665 (100%), Positives = 665/665 (100%)

Query: 1   MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60
           MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE
Sbjct: 1   MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60

Query: 61  LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120
           LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF
Sbjct: 61  LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120

Query: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180
           VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE
Sbjct: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180

Query: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240
           ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR
Sbjct: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240

Query: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300
           NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL
Sbjct: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300

Query: 301 YYVEHRDDELYILTNVGEPTEFKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKF 360
           YYVEHRDDELYILTNVGEPTEFKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKF
Sbjct: 301 YYVEHRDDELYILTNVGEPTEFKLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKF 360

Query: 361 AEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAY 420
           AEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAY
Sbjct: 361 AEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAY 420

Query: 421 GMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTL 480
           GMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTL
Sbjct: 421 GMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTL 480

Query: 481 HGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLE 540
           HGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLE
Sbjct: 481 HGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLE 540

Query: 541 ELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKE 600
           ELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKE
Sbjct: 541 ELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKE 600

Query: 601 AIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLK 660
           AIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLK
Sbjct: 601 AIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLK 660

Query: 661 KYLKF 665
           KYLKF
Sbjct: 661 KYLKF 665


>gi|108860692 prolyl endopeptidase-like isoform D [Homo sapiens]
          Length = 661

 Score = 1221 bits (3158), Expect = 0.0
 Identities = 612/675 (90%), Positives = 622/675 (92%), Gaps = 24/675 (3%)

Query: 1   MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60
           MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE
Sbjct: 1   MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60

Query: 61  LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120
           LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF
Sbjct: 61  LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120

Query: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180
           VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE
Sbjct: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180

Query: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240
           ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR
Sbjct: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240

Query: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300
           NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL
Sbjct: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300

Query: 301 YYVEHRDDELYILTNVGEPTEFKLPPWACGFIMDTNSD-PKNCPFQLCSPIRPPKYYTYK 359
           YYVEHRDDELYILTNVGEPTEFKL        M T +D P    + L   ++       K
Sbjct: 301 YYVEHRDDELYILTNVGEPTEFKL--------MRTAADTPAIMNWDLFFTMK----RNTK 348

Query: 360 FAEGKLFEETGHEDPITKTSRVLRLEA---------KSKDGKLVPMTVFHKTDSEDLQKK 410
             +  +F++  H     K S +L +             KDGKLVPMTVFHKTDSEDLQKK
Sbjct: 349 VIDLDMFKD--HCVLFLKHSNLLYVNVIGLADDSVRSLKDGKLVPMTVFHKTDSEDLQKK 406

Query: 411 PLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGL 470
           PLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGL
Sbjct: 407 PLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHVRGGGELGLQWHADGRLTKKLNGL 466

Query: 471 ADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTM 530
           ADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTM
Sbjct: 467 ADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAVTLEAPFLDVLNTM 526

Query: 531 MDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKG 590
           MDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKG
Sbjct: 527 MDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKG 586

Query: 591 IVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGL 650
           IVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGL
Sbjct: 587 IVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGNHVIEDSHKKITAQIKFLYEELGL 646

Query: 651 DSTSVFEDLKKYLKF 665
           DSTSVFEDLKKYLKF
Sbjct: 647 DSTSVFEDLKKYLKF 661


>gi|70778815 prolyl endopeptidase-like isoform C [Homo sapiens]
          Length = 727

 Score =  713 bits (1840), Expect = 0.0
 Identities = 343/343 (100%), Positives = 343/343 (100%)

Query: 323 KLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVL 382
           KLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVL
Sbjct: 385 KLPPWACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVL 444

Query: 383 RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL 442
           RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL
Sbjct: 445 RLEAKSKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWIL 504

Query: 443 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL 502
           AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL
Sbjct: 505 AYCHVRGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVL 564

Query: 503 AGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC 562
           AGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC
Sbjct: 565 AGALCNSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYC 624

Query: 563 PYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDI 622
           PYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDI
Sbjct: 625 PYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDI 684

Query: 623 QPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF 665
           QPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF
Sbjct: 685 QPGGNHVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF 727



 Score =  673 bits (1737), Expect = 0.0
 Identities = 324/324 (100%), Positives = 324/324 (100%)

Query: 1   MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60
           MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE
Sbjct: 1   MQQKTKLFLQALKYSIPHLGKCMQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNKPKISE 60

Query: 61  LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120
           LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF
Sbjct: 61  LARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGF 120

Query: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180
           VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE
Sbjct: 121 VYYQEGCCLVRSKDEEADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSE 180

Query: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240
           ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR
Sbjct: 181 ASTCVIIKLSDQPVMEASFPNVSSFEWVKDEEDEDVLFYTFQRNLRCHDVYRATFGDNKR 240

Query: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300
           NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL
Sbjct: 241 NERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRIHGVL 300

Query: 301 YYVEHRDDELYILTNVGEPTEFKL 324
           YYVEHRDDELYILTNVGEPTEFKL
Sbjct: 301 YYVEHRDDELYILTNVGEPTEFKL 324


>gi|41349456 prolyl endopeptidase [Homo sapiens]
          Length = 710

 Score = 97.4 bits (241), Expect = 4e-20
 Identities = 92/374 (24%), Positives = 155/374 (41%), Gaps = 37/374 (9%)

Query: 237 DNKRNERFYTEKDPSYFVFLYLTKDSRFLTINIMNKTTSEVWLIDGLSPWDPPVLIQKRI 296
           DN   E  Y   + + F F    +   +  INI  +   E       S W   VL+ +  
Sbjct: 284 DNFEGEYDYVTNEGTVFTFKTNRQSPNYRVINIDFRDPEE-------SKWK--VLVPEHE 334

Query: 297 HGVLYYVE------------HRDDELYILTNVGEPTEFKLPPWACGFIMDTNSDPKNCP- 343
             VL ++             H    +  L ++      K  P   G I+  +   K+   
Sbjct: 335 KDVLEWIACVRSNFLVLCYLHDVKNILQLHDLTTGALLKTFPLDVGSIVGYSGQKKDTEI 394

Query: 344 -FQLCSPIRPPKYY----TYKFAEGKLFEETGHEDPITKTSRVLRLEAKSKDGKLVPMTV 398
            +Q  S + P   Y    T +  E ++F E   +       + +++   SKDG  +PM +
Sbjct: 395 FYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFI 454

Query: 399 FHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDD-GWILAYCHVRGGGELGLQW 457
            HK   +     P  ++ YG + + +  N+   R + V   G ILA  ++RGGGE G  W
Sbjct: 455 VHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVANIRGGGEYGETW 514

Query: 458 HADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALCNSNPELVRAV 517
           H  G L  K N   D +   + L  +G++ P   T+   S GG+L  A  N  P+L   V
Sbjct: 515 HKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCV 574

Query: 518 TLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIK-PQ----HY 572
             +   +D+L     T   +      ++G  S  ++H  ++ +Y P  N+K P+     Y
Sbjct: 575 IAQVGVMDMLKFHKYT---IGHAWTTDYG-CSDSKQHFEWLVKYSPLHNVKLPEADDIQY 630

Query: 573 PSIHITAYENDERV 586
           PS+ +   ++D+RV
Sbjct: 631 PSMLLLTADHDDRV 644


>gi|24308223 hypothetical protein LOC57577 [Homo sapiens]
          Length = 936

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 18/169 (10%)

Query: 73  KDLQPVKQENEKPLPENMDAFEKVRTKLETQPQEEYEIINVEVKHGGFVYYQEGCCLVRS 132
           K+ Q  KQ+ +  L   M   +    +L  + + EY+ I   +K   F+   E  CLV+ 
Sbjct: 177 KENQDKKQQKDPRLTMEMRHKQVKENRLRREKELEYQRIEKTLKKSAFL---EAQCLVQE 233

Query: 133 KDE----EADNDNYEVLFNLEELKLDQPFIDCIRVAPDEKYVAAKIRTEDSEASTCVIIK 188
           + +    EA  +  E+    E +KL +  I+  R       +  K + E+S+ S      
Sbjct: 234 EKKRKALEAKKEEEEI--QREMVKLRREIIERRRTVKAAWKIEKKRQEENSQNS------ 285

Query: 189 LSDQPVMEASFPNVSSFEWVKDEED--EDVLFYTFQRNLRCHDVYRATF 235
            S++ + +++       + VK+ +   ++VL  TF+ N +C   Y A +
Sbjct: 286 -SEKVMFQSTHILPDEEKMVKERKRKLKEVLIQTFKENQQCQKRYFAAW 333


>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
           sapiens]
          Length = 1843

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 23/121 (19%), Positives = 57/121 (47%), Gaps = 17/121 (14%)

Query: 1   MQQKTKLFLQALKYSIPHLGKC-----MQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNK 55
           ++++ K+  +++K +   L K        K+ L HY         ++ + +HL K     
Sbjct: 585 IEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEK----- 639

Query: 56  PKISELARNIPSRSFSCKDLQPVKQEN------EKPLPENMDAFEKVRTKLETQPQEEYE 109
            +   L + I +   +C+ ++ ++QEN       + L + +D+F+ +  +LE+  +E  +
Sbjct: 640 -ENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQ 698

Query: 110 I 110
           +
Sbjct: 699 L 699


>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
           sapiens]
          Length = 1870

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 23/121 (19%), Positives = 57/121 (47%), Gaps = 17/121 (14%)

Query: 1   MQQKTKLFLQALKYSIPHLGKC-----MQKQHLNHYNFADHCYNRIKLKKYHLTKCLQNK 55
           ++++ K+  +++K +   L K        K+ L HY         ++ + +HL K     
Sbjct: 585 IEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEK----- 639

Query: 56  PKISELARNIPSRSFSCKDLQPVKQEN------EKPLPENMDAFEKVRTKLETQPQEEYE 109
            +   L + I +   +C+ ++ ++QEN       + L + +D+F+ +  +LE+  +E  +
Sbjct: 640 -ENELLQKKITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQ 698

Query: 110 I 110
           +
Sbjct: 699 L 699


>gi|116686122 kinesin family member 4 [Homo sapiens]
          Length = 1232

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 13/79 (16%)

Query: 45  KYHLTKCLQNKPKISELARNIPSRSFSCKDLQPVKQENEKPLPENMDAFEKVRTKLETQP 104
           KY + + + +K ++S+L  ++     SC D+Q       K L E  + F ++ T+L+   
Sbjct: 868 KYLIGELVSSKIQVSKLESSLKQSKTSCADMQ-------KMLFEERNHFAEIETELQA-- 918

Query: 105 QEEYEIINVEVKHGGFVYY 123
               E++ +E +H   V Y
Sbjct: 919 ----ELVRMEQQHQEKVLY 933


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,212,673
Number of Sequences: 37866
Number of extensions: 1312828
Number of successful extensions: 3080
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3072
Number of HSP's gapped (non-prelim): 10
length of query: 665
length of database: 18,247,518
effective HSP length: 109
effective length of query: 556
effective length of database: 14,120,124
effective search space: 7850788944
effective search space used: 7850788944
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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