Guide to the Human Genome
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Name: GPR56 Sequence: fasta or formatted (687aa) NCBI GI: 41584198
Description:

G protein-coupled receptor 56 isoform b precursor

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt mRNA [687aa] G protein-coupled receptor 56 isoform b precursor
alt prot [693aa] G protein-coupled receptor 56 isoform a precursor
alt mRNA [687aa] G protein-coupled receptor 56 isoform b precursor
alt prot [692aa] G protein-coupled receptor 56 isoform c precursor
alt mRNA [687aa] G protein-coupled receptor 56 isoform b precursor
alt prot [693aa] G protein-coupled receptor 56 isoform a precursor
alt mRNA [687aa] G protein-coupled receptor 56 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         45           2
 C cysteine            2.0         14           1
 D aspartate           2.9         20           1
 E glutamate           4.1         28           3
 F phenylalanine       5.8         40           2
 G glycine             4.9         34           2
 H histidine           3.8         26           1
 I isoleucine          3.5         24           2
 K lysine              2.9         20           1
 L leucine            14.8        102           3
 M methionine          2.0         14           1
 N asparagine          2.5         17           1
 P proline             5.1         35           2
 Q glutamine           4.9         34           2
 R arginine            5.2         36           2
 S serine             11.2         77           3
 T threonine           5.7         39           2
 V valine              7.3         50           2
 W tryptophan          1.9         13           2
 Y tyrosine            2.8         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 56 isoform b precursor [H... 
GPR56                 1.000   G protein-coupled receptor 56 isoform b precursor [...
GPR56                 1.000   G protein-coupled receptor 56 isoform b precursor [...
GPR56                 1.000   G protein-coupled receptor 56 isoform b precursor [...
GPR56                 1.000   G protein-coupled receptor 56 isoform b precursor [H...
GPR56                 0.995   G protein-coupled receptor 56 isoform c precursor [...
GPR56                 0.995   G protein-coupled receptor 56 isoform a precursor [H...
GPR56                 0.995   G protein-coupled receptor 56 isoform a precursor [...
GPR114                0.179   G protein-coupled receptor 114 
GPR64                 0.153   G protein-coupled receptor 64 isoform 3 
GPR64                 0.153   G protein-coupled receptor 64 isoform 2 
GPR64                 0.153   G protein-coupled receptor 64 isoform 1 
GPR64                 0.153   G protein-coupled receptor 64 isoform 4 
GPR97                 0.147   G protein-coupled receptor 97 
GPR112                0.145   G-protein coupled receptor 112 
GPR126                0.135   G protein-coupled receptor 126 alpha 1 precursor [Ho...
GPR126                0.135   G protein-coupled receptor 126 beta 1 precursor [Hom...
GPR126                0.135   G protein-coupled receptor 126 alpha 2 precursor [Ho...
GPR126                0.135   G protein-coupled receptor 126 beta 2 precursor [Hom...
LPHN3                 0.092   latrophilin 3 precursor 
LPHN2                 0.085   latrophilin 2 precursor 
LPHN1                 0.083   latrophilin 1 isoform 1 precursor 
LPHN1                 0.083   latrophilin 1 isoform 2 precursor 
EMR2                  0.077   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.077   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.077   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.077   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.077   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.077   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.077   egf-like module containing, mucin-like, hormone rece...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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