Search of human proteins with 39930531

Search of human proteins with 39930531

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|39930531 AER61 glycosyltransferase [Homo sapiens]
         (443 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|39930531 AER61 glycosyltransferase [Homo sapiens]                  940   0.0  
gi|31542693 glycosyltransferase [Homo sapiens]                         57   3e-08
gi|16418383 transcriptional repressor NAC1 [Homo sapiens]              29   9.8  

>gi|39930531 AER61 glycosyltransferase [Homo sapiens]
          Length = 443

 Score =  940 bits (2429), Expect = 0.0
 Identities = 443/443 (100%), Positives = 443/443 (100%)

Query: 1   MLMLFVFGVLLHEVSLSGQNEAPPNTHSIPGEPLYNYASIRLPEEHIPFFLHNNRHIATV 60
           MLMLFVFGVLLHEVSLSGQNEAPPNTHSIPGEPLYNYASIRLPEEHIPFFLHNNRHIATV
Sbjct: 1   MLMLFVFGVLLHEVSLSGQNEAPPNTHSIPGEPLYNYASIRLPEEHIPFFLHNNRHIATV 60

Query: 61  CRKDSLCPYKKHLEKLKYCWGYEKSCKPEFRFGYPVCSYVDMGWTDTLESAEDIFWKQAD 120
           CRKDSLCPYKKHLEKLKYCWGYEKSCKPEFRFGYPVCSYVDMGWTDTLESAEDIFWKQAD
Sbjct: 61  CRKDSLCPYKKHLEKLKYCWGYEKSCKPEFRFGYPVCSYVDMGWTDTLESAEDIFWKQAD 120

Query: 121 FGYARERLEEMHVLCQPKETSDSSLVCSRYLQYCRATNLYLDLRNIKRNHDRFKEDFFQS 180
           FGYARERLEEMHVLCQPKETSDSSLVCSRYLQYCRATNLYLDLRNIKRNHDRFKEDFFQS
Sbjct: 121 FGYARERLEEMHVLCQPKETSDSSLVCSRYLQYCRATNLYLDLRNIKRNHDRFKEDFFQS 180

Query: 181 GEIGGHCKLDIRTLTSEGQRKSPLQSWFAELQSYTQLNFRPIEDAKCDIVIEKPTYFMKL 240
           GEIGGHCKLDIRTLTSEGQRKSPLQSWFAELQSYTQLNFRPIEDAKCDIVIEKPTYFMKL
Sbjct: 181 GEIGGHCKLDIRTLTSEGQRKSPLQSWFAELQSYTQLNFRPIEDAKCDIVIEKPTYFMKL 240

Query: 241 DAGVNMYHHFCDFINLYITQHVNNSFSTDVYIVMWDTDGKIRVTILARSTEYRKILNQNE 300
           DAGVNMYHHFCDFINLYITQHVNNSFSTDVYIVMWDTDGKIRVTILARSTEYRKILNQNE
Sbjct: 241 DAGVNMYHHFCDFINLYITQHVNNSFSTDVYIVMWDTDGKIRVTILARSTEYRKILNQNE 300

Query: 301 LVNALKTVSTFEVQIVDYKYRELGFLDQLRITHNTDIFIGMHGAGLTHLLFLPDWAAVFE 360
           LVNALKTVSTFEVQIVDYKYRELGFLDQLRITHNTDIFIGMHGAGLTHLLFLPDWAAVFE
Sbjct: 301 LVNALKTVSTFEVQIVDYKYRELGFLDQLRITHNTDIFIGMHGAGLTHLLFLPDWAAVFE 360

Query: 361 LYNCEDERCYLDLARLRGVHYITWRRQNKVFPQDKGHHPTLGEHPKFTNYSFDVEEFMYL 420
           LYNCEDERCYLDLARLRGVHYITWRRQNKVFPQDKGHHPTLGEHPKFTNYSFDVEEFMYL
Sbjct: 361 LYNCEDERCYLDLARLRGVHYITWRRQNKVFPQDKGHHPTLGEHPKFTNYSFDVEEFMYL 420

Query: 421 VLQAADHVLQHPKWPFKKKHDEL 443
           VLQAADHVLQHPKWPFKKKHDEL
Sbjct: 421 VLQAADHVLQHPKWPFKKKHDEL 443


>gi|31542693 glycosyltransferase [Homo sapiens]
          Length = 580

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 12/127 (9%)

Query: 279 GKIRVTILARSTEYRKILNQNELVNALKTVSTFEVQIVDYKYRELGFLDQLRITHNTDIF 338
           G+  + + +R T+ R ILN+ EL+ AL     F+++ V     +  F D +R+  N  + 
Sbjct: 285 GEEYILVFSR-TQNRLILNEAELLLAL--AQEFQMKTVTVSLEDHTFADVVRLVSNASML 341

Query: 339 IGMHGAGLTHLLFLPDWAAVFELY----NCEDERCYLDLARLRG--VHYITWRRQNKVFP 392
           + MHGA L   LFLP  A V EL+    N +    Y  LA L G  + Y+ WR    + P
Sbjct: 342 VSMHGAQLVTTLFLPRGATVVELFPYAVNPDHYTPYKTLAMLPGMDLQYVAWR---NMMP 398

Query: 393 QDKGHHP 399
           ++   HP
Sbjct: 399 ENTVTHP 405


>gi|16418383 transcriptional repressor NAC1 [Homo sapiens]
          Length = 527

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 26/107 (24%), Positives = 39/107 (36%), Gaps = 14/107 (13%)

Query: 126 ERLEEMHVLCQPKETSDSSLVCSRYLQYCRATNLYLDLRNIKRNH-----------DRFK 174
           E + ++   C PK   +     S  L+    TN+Y+    +   H            R  
Sbjct: 346 ELINQIGNRCHPKLYDEGDP--SEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLL 403

Query: 175 EDFFQSGEIGGHCKLDIRTLTSEGQRKSPLQSWFAELQSYTQLNFRP 221
             FF    +   C   IR+ T++ +RK PL S       Y   NF P
Sbjct: 404 ASFFDRNTLANSCGTGIRSSTNDPRRK-PLDSRVLHAVKYYCQNFAP 449


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.139    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,562,120
Number of Sequences: 37866
Number of extensions: 802692
Number of successful extensions: 2032
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2030
Number of HSP's gapped (non-prelim): 3
length of query: 443
length of database: 18,247,518
effective HSP length: 105
effective length of query: 338
effective length of database: 14,271,588
effective search space: 4823796744
effective search space used: 4823796744
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.