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Search of human proteins with 33667034
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33667034 PRELI domain containing 2 isoform c [Homo sapiens]
(148 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33667034 PRELI domain containing 2 isoform c [Homo sapiens] 297 2e-81
gi|45593132 PRELI domain containing 2 isoform b [Homo sapiens] 297 2e-81
gi|33667079 PRELI domain containing 2 isoform a [Homo sapiens] 288 9e-79
gi|150010661 SEC14-like 5 [Homo sapiens] 42 2e-04
gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens] 40 7e-04
gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 40 7e-04
gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 40 7e-04
gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens] 40 7e-04
gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens] 40 7e-04
gi|8923958 B-cell translocation gene 4 [Homo sapiens] 30 0.57
gi|4506583 replication protein A1, 70kDa [Homo sapiens] 27 6.2
gi|169164010 PREDICTED: hypothetical protein [Homo sapiens] 27 8.2
gi|113413673 PREDICTED: hypothetical protein [Homo sapiens] 27 8.2
gi|113412839 PREDICTED: hypothetical protein [Homo sapiens] 27 8.2
>gi|33667034 PRELI domain containing 2 isoform c [Homo sapiens]
Length = 148
Score = 297 bits (761), Expect = 2e-81
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQLEEESWLNPR 60
MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQLEEESWLNPR
Sbjct: 1 MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQLEEESWLNPR 60
Query: 61 ERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFAS 120
ERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFAS
Sbjct: 61 ERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFAS 120
Query: 121 TFLRQGAQKGIRIMEMLLKEQCGAPLAE 148
TFLRQGAQKGIRIMEMLLKEQCGAPLAE
Sbjct: 121 TFLRQGAQKGIRIMEMLLKEQCGAPLAE 148
>gi|45593132 PRELI domain containing 2 isoform b [Homo sapiens]
Length = 177
Score = 297 bits (761), Expect = 2e-81
Identities = 148/148 (100%), Positives = 148/148 (100%)
Query: 1 MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQLEEESWLNPR 60
MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQLEEESWLNPR
Sbjct: 30 MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQLEEESWLNPR 89
Query: 61 ERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFAS 120
ERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFAS
Sbjct: 90 ERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFAS 149
Query: 121 TFLRQGAQKGIRIMEMLLKEQCGAPLAE 148
TFLRQGAQKGIRIMEMLLKEQCGAPLAE
Sbjct: 150 TFLRQGAQKGIRIMEMLLKEQCGAPLAE 177
>gi|33667079 PRELI domain containing 2 isoform a [Homo sapiens]
Length = 189
Score = 288 bits (738), Expect = 9e-79
Identities = 148/160 (92%), Positives = 148/160 (92%), Gaps = 12/160 (7%)
Query: 1 MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRK------------VSILKVPN 48
MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRK VSILKVPN
Sbjct: 30 MDKNVISVKIMEEKRDESTGVIYRKRIAICQNVVPEILRKSLSTLVILCWKKVSILKVPN 89
Query: 49 IQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGV 108
IQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGV
Sbjct: 90 IQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGV 149
Query: 109 GFLNCVLETFASTFLRQGAQKGIRIMEMLLKEQCGAPLAE 148
GFLNCVLETFASTFLRQGAQKGIRIMEMLLKEQCGAPLAE
Sbjct: 150 GFLNCVLETFASTFLRQGAQKGIRIMEMLLKEQCGAPLAE 189
>gi|150010661 SEC14-like 5 [Homo sapiens]
Length = 696
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 2/132 (1%)
Query: 9 KIMEEKRDESTGVIYRKRIAICQNVVPEILRKVSILKVPNIQLEEESWLNPRERNMAIRS 68
+++ E R V +R + P +LRK++ V ++ + + LN +ER + I +
Sbjct: 40 EVLRESRSPDGAVHVVERSCRLRVDAPRLLRKIA--GVEHVVFVQTNILNWKERTLLIEA 97
Query: 69 HCLTWTQYASMKEESVFRESMENPNWTEFIQRGRISITGVGFLNCVLETFASTFLRQGAQ 128
H T+ + E + EN +WT F Q + I LE A +
Sbjct: 98 HNETFANRVVVNEHCSYTVHPENEDWTCFEQSASLDIRSFFGFENALEKIAMKQYTANVK 157
Query: 129 KGIRIMEMLLKE 140
+G ++E L E
Sbjct: 158 RGKEVIEHYLNE 169
>gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens]
Length = 681
Score = 40.0 bits (92), Expect = 7e-04
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 35 PEILRKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNW 94
P +L+K++ V + +++ LN RER + I ++ T++ + E + EN +W
Sbjct: 32 PRLLKKIA--GVDYVYFVQKNSLNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDW 89
Query: 95 TEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 140
T F Q + I +E A +KG I+E L++
Sbjct: 90 TCFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQ 135
>gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 40.0 bits (92), Expect = 7e-04
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 35 PEILRKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNW 94
P +L+K++ V + +++ LN RER + I ++ T++ + E + EN +W
Sbjct: 66 PRLLKKIA--GVDYVYFVQKNSLNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDW 123
Query: 95 TEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 140
T F Q + I +E A +KG I+E L++
Sbjct: 124 TCFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQ 169
>gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 40.0 bits (92), Expect = 7e-04
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 35 PEILRKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNW 94
P +L+K++ V + +++ LN RER + I ++ T++ + E + EN +W
Sbjct: 66 PRLLKKIA--GVDYVYFVQKNSLNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDW 123
Query: 95 TEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 140
T F Q + I +E A +KG I+E L++
Sbjct: 124 TCFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQ 169
>gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens]
Length = 719
Score = 40.0 bits (92), Expect = 7e-04
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 35 PEILRKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNW 94
P +L+K++ V + +++ LN RER + I ++ T++ + E + EN +W
Sbjct: 66 PRLLKKIA--GVDYVYFVQKNSLNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDW 123
Query: 95 TEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 140
T F Q + I +E A +KG I+E L++
Sbjct: 124 TCFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQ 169
>gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
Length = 715
Score = 40.0 bits (92), Expect = 7e-04
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 35 PEILRKVSILKVPNIQLEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPNW 94
P +L+K++ V + +++ LN RER + I ++ T++ + E + EN +W
Sbjct: 66 PRLLKKIA--GVDYVYFVQKNSLNSRERTLHIEAYNETFSNRVIINEHCCYTVHPENEDW 123
Query: 95 TEFIQRGRISITGVGFLNCVLETFASTFLRQGAQKGIRIMEMLLKE 140
T F Q + I +E A +KG I+E L++
Sbjct: 124 TCFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKKGKEIIEYYLRQ 169
>gi|8923958 B-cell translocation gene 4 [Homo sapiens]
Length = 223
Score = 30.4 bits (67), Expect = 0.57
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 33 VVPEILRKVSILKVPNIQLEEESWLN-PRERNMAI-RSHCLTWTQYASMKEESVFRESM 89
V+P++ SI +V N++ +SWL PR++N+ R L T + S K +R +M
Sbjct: 158 VIPKVSNPKSIYQVENLKQPFQSWLQIPRKKNVVDGRVGLLGNTYHGSQKHPKCYRPAM 216
>gi|4506583 replication protein A1, 70kDa [Homo sapiens]
Length = 616
Score = 26.9 bits (58), Expect = 6.2
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 43 ILKVPNIQLEEESWLNP-RERNMAIRSHCLTWTQYASMKEESVFRESMENPNWTEFIQRG 101
IL V +E W+ +E AI + K E F E +N N+ FI R
Sbjct: 515 ILSVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQNANFRSFIFRV 574
Query: 102 RISI 105
R+ +
Sbjct: 575 RVKV 578
>gi|169164010 PREDICTED: hypothetical protein [Homo sapiens]
Length = 119
Score = 26.6 bits (57), Expect = 8.2
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 51 LEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPN 93
LE + W + RER R+ CL ++ +S + ++ + + P+
Sbjct: 44 LEAKRWASERERAATDRAGCLGVSEASSCRRQAAGQRDLRTPD 86
>gi|113413673 PREDICTED: hypothetical protein [Homo sapiens]
Length = 119
Score = 26.6 bits (57), Expect = 8.2
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 51 LEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPN 93
LE + W + RER R+ CL ++ +S + ++ + + P+
Sbjct: 44 LEAKRWASERERAATDRAGCLGVSEASSCRRQAAGQRDLRTPD 86
>gi|113412839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 119
Score = 26.6 bits (57), Expect = 8.2
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 51 LEEESWLNPRERNMAIRSHCLTWTQYASMKEESVFRESMENPN 93
LE + W + RER R+ CL ++ +S + ++ + + P+
Sbjct: 44 LEAKRWASERERAATDRAGCLGVSEASSCRRQAAGQRDLRTPD 86
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,261,094
Number of Sequences: 37866
Number of extensions: 204775
Number of successful extensions: 479
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 466
Number of HSP's gapped (non-prelim): 14
length of query: 148
length of database: 18,247,518
effective HSP length: 93
effective length of query: 55
effective length of database: 14,725,980
effective search space: 809928900
effective search space used: 809928900
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.