Search of human proteins with 32698978

Search of human proteins with 32698978

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32698978 thioesterase superfamily member 5 [Homo sapiens]
         (247 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32698978 thioesterase superfamily member 5 [Homo sapiens]          499   e-141
gi|76159293 thioesterase superfamily member 4 [Homo sapiens]          159   2e-39
gi|34328899 protein tyrosine phosphatase, non-receptor type 14 [...    29   4.3  
gi|5729840 tubulin, gamma complex associated protein 2 [Homo sap...    28   7.4  

>gi|32698978 thioesterase superfamily member 5 [Homo sapiens]
          Length = 247

 Score =  499 bits (1284), Expect = e-141
 Identities = 247/247 (100%), Positives = 247/247 (100%)

Query: 1   MIRRCFQVAARLGHHRGLLEAPRILPRLNPASAFGSSTDSMFSRFLPEKTDLKDYALPNA 60
           MIRRCFQVAARLGHHRGLLEAPRILPRLNPASAFGSSTDSMFSRFLPEKTDLKDYALPNA
Sbjct: 1   MIRRCFQVAARLGHHRGLLEAPRILPRLNPASAFGSSTDSMFSRFLPEKTDLKDYALPNA 60

Query: 61  SWCSDMLSLYQEFLEKTKSSGWIKLPSFKSNRDHIRGLKLPSGLAVSSDKGDCRIFTRCI 120
           SWCSDMLSLYQEFLEKTKSSGWIKLPSFKSNRDHIRGLKLPSGLAVSSDKGDCRIFTRCI
Sbjct: 61  SWCSDMLSLYQEFLEKTKSSGWIKLPSFKSNRDHIRGLKLPSGLAVSSDKGDCRIFTRCI 120

Query: 121 QVEGQGFEYVIFFQPTQKKSVCLFQPGSYLEGPPGFAHGGSLAAMMDETFSKTAFLAGEG 180
           QVEGQGFEYVIFFQPTQKKSVCLFQPGSYLEGPPGFAHGGSLAAMMDETFSKTAFLAGEG
Sbjct: 121 QVEGQGFEYVIFFQPTQKKSVCLFQPGSYLEGPPGFAHGGSLAAMMDETFSKTAFLAGEG 180

Query: 181 LFTLSLNIRFKNLIPVDSLVVMDVEVDKIEDQKLYMSCIAHSRDQQTVYAKSSGVFLQLQ 240
           LFTLSLNIRFKNLIPVDSLVVMDVEVDKIEDQKLYMSCIAHSRDQQTVYAKSSGVFLQLQ
Sbjct: 181 LFTLSLNIRFKNLIPVDSLVVMDVEVDKIEDQKLYMSCIAHSRDQQTVYAKSSGVFLQLQ 240

Query: 241 LEEESPQ 247
           LEEESPQ
Sbjct: 241 LEEESPQ 247


>gi|76159293 thioesterase superfamily member 4 [Homo sapiens]
          Length = 240

 Score =  159 bits (402), Expect = 2e-39
 Identities = 92/243 (37%), Positives = 142/243 (58%), Gaps = 14/243 (5%)

Query: 1   MIRRCFQVAARLGHHRGLLEAPRILPRLNPASAFGSSTDSMFSRFLPEKTDLKDYALPNA 60
           M+R C   AARL    G L  P +  RL      GS        F  E+  LKD ++PN 
Sbjct: 1   MLRSC---AARL-RTLGALCLPPVGRRLP-----GSEPRPELRSFSSEEVILKDCSVPNP 51

Query: 61  SWCSDMLSLYQEFLEKTKSSGWIKLPSFKSN-RDHIRGLK---LPSGLAVSSDKGDCRIF 116
           SW  D+  L+ +F++K +   W +LPS+K    + I+  K   L   L         ++F
Sbjct: 52  SWNKDLRLLFDQFMKKCEDGSWKRLPSYKRTPTEWIQDFKTHFLDPKLMKEEQMSQAQLF 111

Query: 117 TRCIQVEGQGFEYVIFFQPTQKKSVCLFQPGSYLEGPPGFAHGGSLAAMMDETFSKTAFL 176
           TR    +G GFEYV+F+   +K+ VCLFQ G YLEGPPGF HGG++A M+D T    A +
Sbjct: 112 TRSFD-DGLGFEYVMFYNDIEKRMVCLFQGGPYLEGPPGFIHGGAIATMIDATVGMCAMM 170

Query: 177 AGEGLFTLSLNIRFKNLIPVDSLVVMDVEVDKIEDQKLYMSCIAHSRDQQTVYAKSSGVF 236
           AG  + T +LNI +K  IP+ S+V+++ ++DK+E +K ++SC   S D++T+Y++++ +F
Sbjct: 171 AGGIVMTANLNINYKRPIPLCSVVMINSQLDKVEGRKFFVSCNVQSVDEKTLYSEATSLF 230

Query: 237 LQL 239
           ++L
Sbjct: 231 IKL 233


>gi|34328899 protein tyrosine phosphatase, non-receptor type 14
           [Homo sapiens]
          Length = 1187

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 14/80 (17%)

Query: 55  YALPNASWCSDMLSLYQEFLEKTKSSGWIKLPSFKSNRDHIRGLKLPSGLAVSSDKGDCR 114
           + +PN SW     + YQ +L+  K    +     +   D +  L   +GLAV +D GD  
Sbjct: 101 FYVPNVSWLQQEATRYQYYLQVKKD---VLEGRLRCTLDQVIRL---AGLAVQADFGDYN 154

Query: 115 IFTRCIQVEGQGF--EYVIF 132
                 Q + Q F  EYV+F
Sbjct: 155 ------QFDSQDFLREYVLF 168


>gi|5729840 tubulin, gamma complex associated protein 2 [Homo
           sapiens]
          Length = 902

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 15/133 (11%)

Query: 19  LEAPRILPRLNPASAFGSSTDSMFSRFLPEKTDLKDYALPNASWCSDMLSLYQEFL---- 74
           L    ++ R+ P +A  S+     +RF+ EK+   +Y   N +  + M +L +E L    
Sbjct: 254 LSIRELVHRILPVAASYSAV----TRFIEEKSSF-EYGQVNHALAAAMRTLVKEHLILVS 308

Query: 75  --EKTKSSGWIKLPSFKSN-RDHIRGLKLPSGLAVSSDKGDCRIFTRCIQVEGQGFEYVI 131
             E+    G + L       +  +R + + + LA S DKG+C   +    +  + F Y  
Sbjct: 309 QLEQLHRQGLLSLQKLWFYIQPAMRTMDILASLATSVDKGECLGGSTLSLLHDRSFSYT- 367

Query: 132 FFQPTQKKSVCLF 144
               +Q + +CL+
Sbjct: 368 --GDSQAQELCLY 378


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,917,551
Number of Sequences: 37866
Number of extensions: 443796
Number of successful extensions: 836
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 833
Number of HSP's gapped (non-prelim): 4
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.