Search of human proteins with 30520346

Search of human proteins with 30520346

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30520346 A kinase (PRKA) anchor protein 14 isoform a [Homo
sapiens]
         (197 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30520346 A kinase (PRKA) anchor protein 14 isoform a [Homo sa...   405   e-113
gi|56682938 A kinase (PRKA) anchor protein 14 isoform b [Homo sa...   208   3e-54
gi|56682940 A kinase (PRKA) anchor protein 14 isoform c [Homo sa...   176   1e-44
gi|166362737 erythrocyte membrane protein band 4.2 isoform 2 [Ho...    32   0.27 
gi|166362735 erythrocyte membrane protein band 4.2 isoform 1 [Ho...    32   0.27 
gi|164663830 FGGY carbohydrate kinase domain containing isoform ...    31   0.60 
gi|164663828 FGGY carbohydrate kinase domain containing isoform ...    31   0.60 
gi|15042949 PR domain containing 12 [Homo sapiens]                     29   2.3  
gi|13375787 EF-hand calcium binding domain 1 isoform a [Homo sap...    28   5.0  
gi|62955803 nucleoporin 188kDa [Homo sapiens]                          28   5.0  

>gi|30520346 A kinase (PRKA) anchor protein 14 isoform a [Homo
           sapiens]
          Length = 197

 Score =  405 bits (1041), Expect = e-113
 Identities = 197/197 (100%), Positives = 197/197 (100%)

Query: 1   MSETQNSTSQKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINYAVKIVEEERN 60
           MSETQNSTSQKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINYAVKIVEEERN
Sbjct: 1   MSETQNSTSQKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINYAVKIVEEERN 60

Query: 61  PLKNIKWMTHGEFTVEKGLKQIDEYFSKCVSKKCWAHGVEFVERKDLIHSFLYIYYVHWS 120
           PLKNIKWMTHGEFTVEKGLKQIDEYFSKCVSKKCWAHGVEFVERKDLIHSFLYIYYVHWS
Sbjct: 61  PLKNIKWMTHGEFTVEKGLKQIDEYFSKCVSKKCWAHGVEFVERKDLIHSFLYIYYVHWS 120

Query: 121 ISTADLPVARISAGTYFTMKVSKTKPPDAPIVVSYVGDHQALVHRPGMVRFRENWQKNLT 180
           ISTADLPVARISAGTYFTMKVSKTKPPDAPIVVSYVGDHQALVHRPGMVRFRENWQKNLT
Sbjct: 121 ISTADLPVARISAGTYFTMKVSKTKPPDAPIVVSYVGDHQALVHRPGMVRFRENWQKNLT 180

Query: 181 DAKYSFMESFPFLFNRV 197
           DAKYSFMESFPFLFNRV
Sbjct: 181 DAKYSFMESFPFLFNRV 197


>gi|56682938 A kinase (PRKA) anchor protein 14 isoform b [Homo
           sapiens]
          Length = 137

 Score =  208 bits (529), Expect = 3e-54
 Identities = 124/197 (62%), Positives = 125/197 (63%), Gaps = 60/197 (30%)

Query: 1   MSETQNSTSQKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINYAVKIVEEERN 60
           MSETQNSTSQKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINYAVKIVEEERN
Sbjct: 1   MSETQNSTSQKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINYAVKIVEEERN 60

Query: 61  PLKNIKWMTHGEFTVEKGLKQIDEYFSKCVSKKCWAHGVEFVERKDLIHSFLYIYYVHWS 120
           PLKNI                           K   HG EF   K L             
Sbjct: 61  PLKNI---------------------------KWMTHG-EFTVEKGLKQ----------- 81

Query: 121 ISTADLPVARISAGTYFTMKVSKTKPPDAPIVVSYVGDHQALVHRPGMVRFRENWQKNLT 180
                          YF+         DAPIVVSYVGDHQALVHRPGMVRFRENWQKNLT
Sbjct: 82  ------------IDEYFS---------DAPIVVSYVGDHQALVHRPGMVRFRENWQKNLT 120

Query: 181 DAKYSFMESFPFLFNRV 197
           DAKYSFMESFPFLFNRV
Sbjct: 121 DAKYSFMESFPFLFNRV 137


>gi|56682940 A kinase (PRKA) anchor protein 14 isoform c [Homo
          sapiens]
          Length = 89

 Score =  176 bits (445), Expect = 1e-44
 Identities = 87/87 (100%), Positives = 87/87 (100%)

Query: 1  MSETQNSTSQKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINYAVKIVEEERN 60
          MSETQNSTSQKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINYAVKIVEEERN
Sbjct: 1  MSETQNSTSQKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINYAVKIVEEERN 60

Query: 61 PLKNIKWMTHGEFTVEKGLKQIDEYFS 87
          PLKNIKWMTHGEFTVEKGLKQIDEYFS
Sbjct: 61 PLKNIKWMTHGEFTVEKGLKQIDEYFS 87


>gi|166362737 erythrocyte membrane protein band 4.2 isoform 2 [Homo
           sapiens]
          Length = 691

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 5/52 (9%)

Query: 138 TMKVSKTKPPDAPI---VVSYVGDHQALVHRPGMVRFRENWQKNLTDAKYSF 186
           T  VS     DAP+   V+S +G  + L+HR    RFR  W +N   AK+ F
Sbjct: 605 TASVSLQNSLDAPMEDCVISILG--RGLIHRERSYRFRSVWPENTMCAKFQF 654


>gi|166362735 erythrocyte membrane protein band 4.2 isoform 1 [Homo
           sapiens]
          Length = 721

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 5/52 (9%)

Query: 138 TMKVSKTKPPDAPI---VVSYVGDHQALVHRPGMVRFRENWQKNLTDAKYSF 186
           T  VS     DAP+   V+S +G  + L+HR    RFR  W +N   AK+ F
Sbjct: 635 TASVSLQNSLDAPMEDCVISILG--RGLIHRERSYRFRSVWPENTMCAKFQF 684


>gi|164663830 FGGY carbohydrate kinase domain containing isoform a
           [Homo sapiens]
          Length = 575

 Score = 31.2 bits (69), Expect = 0.60
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 10  QKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINY 50
           Q+AM + +K      P  QDK Y D+  QV L LVE    Y
Sbjct: 528 QEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEHQKEY 568


>gi|164663828 FGGY carbohydrate kinase domain containing isoform b
           [Homo sapiens]
          Length = 551

 Score = 31.2 bits (69), Expect = 0.60
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 10  QKAMDEDNKAASQTMPNTQDKNYEDELTQVALALVEDVINY 50
           Q+AM + +K      P  QDK Y D+  QV L LVE    Y
Sbjct: 504 QEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEHQKEY 544


>gi|15042949 PR domain containing 12 [Homo sapiens]
          Length = 367

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 14/48 (29%), Positives = 22/48 (45%)

Query: 131 ISAGTYFTMKVSKTKPPDAPIVVSYVGDHQALVHRPGMVRFRENWQKN 178
           +  GT    K  +  PPD  ++V Y   H   +  PG+    E+ +KN
Sbjct: 178 VQIGTSIFYKAIEMIPPDQELLVWYGNSHNTFLGIPGVPGLEEDQKKN 225


>gi|13375787 EF-hand calcium binding domain 1 isoform a [Homo
           sapiens]
          Length = 211

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 54  IVEEERNPLKNIKWMTHG---EFTVEKGLKQIDEYFSKCVSKKCWAHGVEFVERKDLIHS 110
           +V  +RN  +NI  +T G   +  +++  +  D+    CV+   W HG+    R  L   
Sbjct: 45  VVGLDRNAFRNILHVTFGMTDDMIMDRVFRGFDKDNDGCVNVLEWIHGLSLFLRGSLEEK 104

Query: 111 FLYIYYV 117
             Y + V
Sbjct: 105 MKYCFEV 111


>gi|62955803 nucleoporin 188kDa [Homo sapiens]
          Length = 1749

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 15/62 (24%)

Query: 67  WMTHGEFTVEKGLKQIDEYFSKCVSKKCWAHGVEFVERKDLIHSFLYIYYVHWSISTADL 126
           W THG    E+   Q+  +F +C+ ++             ++   +++YY ++ ++ +DL
Sbjct: 188 WETHGNLMTER---QVSRWFVQCLREQ------------SMLLEIIFLYYAYFEMAPSDL 232

Query: 127 PV 128
            V
Sbjct: 233 LV 234


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.131    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,168,891
Number of Sequences: 37866
Number of extensions: 287458
Number of successful extensions: 718
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 709
Number of HSP's gapped (non-prelim): 11
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.