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Search of human proteins with 118640870
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|118640870 ADP-ribosyltransferase 5 precursor [Homo sapiens]
(291 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|118640870 ADP-ribosyltransferase 5 precursor [Homo sapiens] 596 e-171
gi|30089992 ADP-ribosyltransferase 5 precursor [Homo sapiens] 596 e-171
gi|158634472 ADP-ribosyltransferase 1 [Homo sapiens] 164 6e-41
gi|194097382 ADP-ribosyltransferase 3 isoform c [Homo sapiens] 152 3e-37
gi|194097380 ADP-ribosyltransferase 3 isoform a [Homo sapiens] 152 3e-37
gi|21361167 ADP-ribosyltransferase 3 isoform b [Homo sapiens] 152 3e-37
gi|61835134 ADP-ribosyltransferase 4 precursor [Homo sapiens] 122 4e-28
gi|224458301 family with sequence similarity 186, member A [Homo... 29 4.3
gi|124487382 COMM domain containing 5 [Homo sapiens] 28 7.3
gi|154800418 COMM domain containing 5 [Homo sapiens] 28 7.3
gi|19923430 COMM domain containing 5 [Homo sapiens] 28 7.3
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap... 28 9.5
>gi|118640870 ADP-ribosyltransferase 5 precursor [Homo sapiens]
Length = 291
Score = 596 bits (1536), Expect = e-171
Identities = 291/291 (100%), Positives = 291/291 (100%)
Query: 1 MALAALMIALGSLGLHTWQAQAVPILPLGLAPDTFDDTYVGCAEEMEEKAAPLLKEEMAH 60
MALAALMIALGSLGLHTWQAQAVPILPLGLAPDTFDDTYVGCAEEMEEKAAPLLKEEMAH
Sbjct: 1 MALAALMIALGSLGLHTWQAQAVPILPLGLAPDTFDDTYVGCAEEMEEKAAPLLKEEMAH 60
Query: 61 HALLRESWEAAQETWEDKRRGLTLPPGFKAQNGIAIMVYTNSSNTLYWELNQAVRTGGGS 120
HALLRESWEAAQETWEDKRRGLTLPPGFKAQNGIAIMVYTNSSNTLYWELNQAVRTGGGS
Sbjct: 61 HALLRESWEAAQETWEDKRRGLTLPPGFKAQNGIAIMVYTNSSNTLYWELNQAVRTGGGS 120
Query: 121 RELYMRHFPFKALHFYLIRALQLLRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQ 180
RELYMRHFPFKALHFYLIRALQLLRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQ
Sbjct: 121 RELYMRHFPFKALHFYLIRALQLLRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQ 180
Query: 181 FASSSLDKAVAHRFGNATLFSLTTCFGAPIQAFSVFPKEREVLIPPHEVFLVTRFSQDGA 240
FASSSLDKAVAHRFGNATLFSLTTCFGAPIQAFSVFPKEREVLIPPHEVFLVTRFSQDGA
Sbjct: 181 FASSSLDKAVAHRFGNATLFSLTTCFGAPIQAFSVFPKEREVLIPPHEVFLVTRFSQDGA 240
Query: 241 QSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAPGALGTGDLHMTKRHLQQP 291
QSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAPGALGTGDLHMTKRHLQQP
Sbjct: 241 QSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAPGALGTGDLHMTKRHLQQP 291
>gi|30089992 ADP-ribosyltransferase 5 precursor [Homo sapiens]
Length = 291
Score = 596 bits (1536), Expect = e-171
Identities = 291/291 (100%), Positives = 291/291 (100%)
Query: 1 MALAALMIALGSLGLHTWQAQAVPILPLGLAPDTFDDTYVGCAEEMEEKAAPLLKEEMAH 60
MALAALMIALGSLGLHTWQAQAVPILPLGLAPDTFDDTYVGCAEEMEEKAAPLLKEEMAH
Sbjct: 1 MALAALMIALGSLGLHTWQAQAVPILPLGLAPDTFDDTYVGCAEEMEEKAAPLLKEEMAH 60
Query: 61 HALLRESWEAAQETWEDKRRGLTLPPGFKAQNGIAIMVYTNSSNTLYWELNQAVRTGGGS 120
HALLRESWEAAQETWEDKRRGLTLPPGFKAQNGIAIMVYTNSSNTLYWELNQAVRTGGGS
Sbjct: 61 HALLRESWEAAQETWEDKRRGLTLPPGFKAQNGIAIMVYTNSSNTLYWELNQAVRTGGGS 120
Query: 121 RELYMRHFPFKALHFYLIRALQLLRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQ 180
RELYMRHFPFKALHFYLIRALQLLRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQ
Sbjct: 121 RELYMRHFPFKALHFYLIRALQLLRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQ 180
Query: 181 FASSSLDKAVAHRFGNATLFSLTTCFGAPIQAFSVFPKEREVLIPPHEVFLVTRFSQDGA 240
FASSSLDKAVAHRFGNATLFSLTTCFGAPIQAFSVFPKEREVLIPPHEVFLVTRFSQDGA
Sbjct: 181 FASSSLDKAVAHRFGNATLFSLTTCFGAPIQAFSVFPKEREVLIPPHEVFLVTRFSQDGA 240
Query: 241 QSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAPGALGTGDLHMTKRHLQQP 291
QSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAPGALGTGDLHMTKRHLQQP
Sbjct: 241 QSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAPGALGTGDLHMTKRHLQQP 291
>gi|158634472 ADP-ribosyltransferase 1 [Homo sapiens]
Length = 327
Score = 164 bits (416), Expect = 6e-41
Identities = 116/295 (39%), Positives = 153/295 (51%), Gaps = 35/295 (11%)
Query: 4 AALMIALGSLGL-HTWQAQAVPI---------LPLGLAPDTFDDTYVGCAEEMEEKAAPL 53
A + + L S+GL QAQ+ PI + L +A +FDD Y GCA M L
Sbjct: 5 AMMSLLLVSVGLMEALQAQSHPITRRDLFSQEIQLDMALASFDDQYAGCAAAMTAALPDL 64
Query: 54 LKEEMAHHALLRESWEAAQETWEDKR-----------RGLTLPPGFKAQNGIAIMVYTNS 102
E + + +SW A W++++ R P GF+ ++G+A++ YT +
Sbjct: 65 NHTEFQANQVYADSWTLASSQWQERQARWPEWSLSPTRPSPPPLGFRDEHGVALLAYTAN 124
Query: 103 SNTLYWELNQAVRTGGGSRELYMRHFPFKALHFYLIRALQLLRGSGGCSRGPG-EVVFRG 161
S L+ E N AVR G SR Y+ HF FK LHF L ALQLL GSG R P VFRG
Sbjct: 125 S-PLHKEFNAAVREAGRSRAHYLHHFSFKTLHFLLTEALQLL-GSG--QRPPRCHQVFRG 180
Query: 162 VGSLRFEPKRLGDSVRLGQFASSSLDKAVAHRFGNATLFSLTTCFGAPIQAFSVFPKERE 221
V LRF P +VRLG FAS+SL A +FG T F + TC GAPI+ +S FP E E
Sbjct: 181 VHGLRFRPAGPRATVRLGGFASASLKHVAAQQFGEDTFFGIWTCLGAPIKGYSFFPGEEE 240
Query: 222 VLIPPHEVFLV---TRFSQDGAQSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAP 273
VLIPP E F V +R +Q A+ + + T +NC Y+ K + C S P
Sbjct: 241 VLIPPFETFQVINASRLAQGPARIYLRALGKHST---YNCEYI---KDKKCKSGP 289
>gi|194097382 ADP-ribosyltransferase 3 isoform c [Homo sapiens]
Length = 367
Score = 152 bits (385), Expect = 3e-37
Identities = 100/247 (40%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 28 LGLAPDTFDDTYVGCAEEMEEKAAP-LLKEEMAHHALLRESWEAAQETWEDKRRGLTLPP 86
L +A + FDD Y+ C + ME K P LLKEE A H L WE A+ W ++ + LP
Sbjct: 29 LDMADNAFDDEYLKCTDRMEIKYVPQLLKEEKASHQQLDTVWENAKAKWAARKTQIFLPM 88
Query: 87 GFKAQNGIAIMVYTNSSNT---LYWELNQAVRTGGGSRELYMRHFPFKALHFYLIRALQL 143
FK +GIA+M Y + + Y ++AV+ G SRE Y+ F FKA HFYL RALQL
Sbjct: 89 NFKDNHGIALMAYISEAQEQTPFYHLFSEAVKMAGQSREDYIYGFQFKAFHFYLTRALQL 148
Query: 144 LRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQFASSSLDKAVAHRFGNATLFSLT 203
LR C VV+R F L + R G F + K A T+ S+
Sbjct: 149 LRKP--CEASSKTVVYRTSQGTSFTFGGL-NQARFGHFTLAYSAKPQAAN-DQLTVLSIY 204
Query: 204 TCFGAPIQAFSVFPKEREVLIPPHEVFLVTRFSQDGAQSLVTLWSYNQTCSHFNCAYLGG 263
TC G I+ F ER LIP +EVF V SQ+GA + + L S N+TCSH+ CA+LGG
Sbjct: 205 TCLGVDIENFLDKESERITLIPLNEVFQV---SQEGAGNNLILQSINKTCSHYECAFLGG 261
Query: 264 EKRRGCV 270
K C+
Sbjct: 262 LKTENCI 268
>gi|194097380 ADP-ribosyltransferase 3 isoform a [Homo sapiens]
Length = 389
Score = 152 bits (385), Expect = 3e-37
Identities = 100/247 (40%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 28 LGLAPDTFDDTYVGCAEEMEEKAAP-LLKEEMAHHALLRESWEAAQETWEDKRRGLTLPP 86
L +A + FDD Y+ C + ME K P LLKEE A H L WE A+ W ++ + LP
Sbjct: 29 LDMADNAFDDEYLKCTDRMEIKYVPQLLKEEKASHQQLDTVWENAKAKWAARKTQIFLPM 88
Query: 87 GFKAQNGIAIMVYTNSSNT---LYWELNQAVRTGGGSRELYMRHFPFKALHFYLIRALQL 143
FK +GIA+M Y + + Y ++AV+ G SRE Y+ F FKA HFYL RALQL
Sbjct: 89 NFKDNHGIALMAYISEAQEQTPFYHLFSEAVKMAGQSREDYIYGFQFKAFHFYLTRALQL 148
Query: 144 LRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQFASSSLDKAVAHRFGNATLFSLT 203
LR C VV+R F L + R G F + K A T+ S+
Sbjct: 149 LRKP--CEASSKTVVYRTSQGTSFTFGGL-NQARFGHFTLAYSAKPQAAN-DQLTVLSIY 204
Query: 204 TCFGAPIQAFSVFPKEREVLIPPHEVFLVTRFSQDGAQSLVTLWSYNQTCSHFNCAYLGG 263
TC G I+ F ER LIP +EVF V SQ+GA + + L S N+TCSH+ CA+LGG
Sbjct: 205 TCLGVDIENFLDKESERITLIPLNEVFQV---SQEGAGNNLILQSINKTCSHYECAFLGG 261
Query: 264 EKRRGCV 270
K C+
Sbjct: 262 LKTENCI 268
>gi|21361167 ADP-ribosyltransferase 3 isoform b [Homo sapiens]
Length = 378
Score = 152 bits (385), Expect = 3e-37
Identities = 100/247 (40%), Positives = 130/247 (52%), Gaps = 11/247 (4%)
Query: 28 LGLAPDTFDDTYVGCAEEMEEKAAP-LLKEEMAHHALLRESWEAAQETWEDKRRGLTLPP 86
L +A + FDD Y+ C + ME K P LLKEE A H L WE A+ W ++ + LP
Sbjct: 29 LDMADNAFDDEYLKCTDRMEIKYVPQLLKEEKASHQQLDTVWENAKAKWAARKTQIFLPM 88
Query: 87 GFKAQNGIAIMVYTNSSNT---LYWELNQAVRTGGGSRELYMRHFPFKALHFYLIRALQL 143
FK +GIA+M Y + + Y ++AV+ G SRE Y+ F FKA HFYL RALQL
Sbjct: 89 NFKDNHGIALMAYISEAQEQTPFYHLFSEAVKMAGQSREDYIYGFQFKAFHFYLTRALQL 148
Query: 144 LRGSGGCSRGPGEVVFRGVGSLRFEPKRLGDSVRLGQFASSSLDKAVAHRFGNATLFSLT 203
LR C VV+R F L + R G F + K A T+ S+
Sbjct: 149 LRKP--CEASSKTVVYRTSQGTSFTFGGL-NQARFGHFTLAYSAKPQAAN-DQLTVLSIY 204
Query: 204 TCFGAPIQAFSVFPKEREVLIPPHEVFLVTRFSQDGAQSLVTLWSYNQTCSHFNCAYLGG 263
TC G I+ F ER LIP +EVF V SQ+GA + + L S N+TCSH+ CA+LGG
Sbjct: 205 TCLGVDIENFLDKESERITLIPLNEVFQV---SQEGAGNNLILQSINKTCSHYECAFLGG 261
Query: 264 EKRRGCV 270
K C+
Sbjct: 262 LKTENCI 268
>gi|61835134 ADP-ribosyltransferase 4 precursor [Homo sapiens]
Length = 314
Score = 122 bits (306), Expect = 4e-28
Identities = 92/281 (32%), Positives = 140/281 (49%), Gaps = 16/281 (5%)
Query: 3 LAALMIALGSLGLHTWQAQAVPILPLGLAPDTFDDTYVGCAEEMEEKAAP---LLKEEMA 59
L ++ L L T ++ + AP +FDD Y GC++++ EK K+ A
Sbjct: 30 LLPFLLLLSGLQRPTEGSEVAIKIDFDFAPGSFDDQYQGCSKQVMEKLTQGDYFTKDIEA 89
Query: 60 HHALLRESWEAAQETWEDKRRGLTLPPGFKAQNGIAIMVYTNSSNTLYWELNQAVRTGGG 119
R W+ A W ++ G LP + +AI+ YT +SN ++ + +A+ +
Sbjct: 90 QKNYFR-MWQKAHLAWLNQ--GKVLPQNMTTTHAVAILFYTLNSN-VHSDFTRAMASVAR 145
Query: 120 SRELYMRHFPFKALHFYLIRALQLLRGSGGCSRGP--GEVVFRGVGSLRFEPKRLGDSVR 177
+ + Y R F FK LH+YL A+QLLR G EV +R + F G ++R
Sbjct: 146 TPQQYERSFHFKYLHYYLTSAIQLLRKDSIMENGTLCYEVHYR-TKDVHFNAYT-GATIR 203
Query: 178 LGQFASSSLDKAVAHRFGNATLFSLTTCFGAPIQAFSVFPKEREVLIPPHEVFLVTRFSQ 237
GQF S+SL K A FGN TLF++ TC GAP+Q FS+ ++EVLIPP+E+F V S
Sbjct: 204 FGQFLSTSLLKEEAQEFGNQTLFTIFTCLGAPVQYFSL---KKEVLIPPYELFKVINMSY 260
Query: 238 DGAQSLVTLWSYNQTCSHFNCAYLGGEKRRGCVSAPGALGT 278
+ L S S +NC L ++ C+ P A+ +
Sbjct: 261 HPRGDWLQLRS-TGNLSTYNCQLLKASSKK-CIPDPIAIAS 299
>gi|224458301 family with sequence similarity 186, member A [Homo
sapiens]
Length = 2351
Score = 29.3 bits (64), Expect = 4.3
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 44 EEMEEKAAPLLKEEM-AHHALLRESWEAAQETWEDKRRGLTLPPGFKAQ 91
E E+ + LK+++ LL+E +E E WE+K+ L + G + Q
Sbjct: 829 EGQEQMSGMSLKQQLLGERNLLKEHYEKISENWEEKKAWLQMKEGKQEQ 877
>gi|124487382 COMM domain containing 5 [Homo sapiens]
Length = 224
Score = 28.5 bits (62), Expect = 7.3
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 10 LGSL--GLHTWQAQAVPILPLGLAPDTFDD 37
LG+L G+HT QA+ + P L PDTF D
Sbjct: 82 LGALLAGMHTLLQQALRLPPTSLKPDTFRD 111
>gi|154800418 COMM domain containing 5 [Homo sapiens]
Length = 224
Score = 28.5 bits (62), Expect = 7.3
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 10 LGSL--GLHTWQAQAVPILPLGLAPDTFDD 37
LG+L G+HT QA+ + P L PDTF D
Sbjct: 82 LGALLAGMHTLLQQALRLPPTSLKPDTFRD 111
>gi|19923430 COMM domain containing 5 [Homo sapiens]
Length = 224
Score = 28.5 bits (62), Expect = 7.3
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 10 LGSL--GLHTWQAQAVPILPLGLAPDTFDD 37
LG+L G+HT QA+ + P L PDTF D
Sbjct: 82 LGALLAGMHTLLQQALRLPPTSLKPDTFRD 111
>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
sapiens]
Length = 619
Score = 28.1 bits (61), Expect = 9.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 87 GFKAQNGIAIMVYTNSSNTLYWELNQAVRTGG 118
G QNG AI N+S L+W++ + V+ G
Sbjct: 537 GRLGQNGTAITFINNNSKRLFWDIAKRVKPTG 568
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,029,951
Number of Sequences: 37866
Number of extensions: 529039
Number of successful extensions: 1232
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1205
Number of HSP's gapped (non-prelim): 12
length of query: 291
length of database: 18,247,518
effective HSP length: 101
effective length of query: 190
effective length of database: 14,423,052
effective search space: 2740379880
effective search space used: 2740379880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.