Guide to the Human Genome
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Name: LOC100291509 Sequence: fasta or formatted (97aa) NCBI GI: 239747995
Description:

PREDICTED: hypothetical protein XP_002346505

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2          7           1
 C cysteine            1.0          1           1
 D aspartate           1.0          1           1
 E glutamate           6.2          6           1
 F phenylalanine       4.1          4           1
 G glycine             9.3          9           2
 H histidine          10.3         10           2
 I isoleucine          0.0          0           0
 K lysine              3.1          3           1
 L leucine            16.5         16           1
 M methionine          3.1          3           1
 N asparagine          2.1          2           1
 P proline             4.1          4           1
 Q glutamine           3.1          3           1
 R arginine            4.1          4           1
 S serine              5.2          5           1
 T threonine           2.1          2           1
 V valine             10.3         10           4
 W tryptophan          5.2          5           1
 Y tyrosine            2.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002346505 
LOC100291765          1.000   PREDICTED: similar to endothelin converting enzyme-...
LOC100289433          1.000   PREDICTED: hypothetical protein XP_002342317 
ECEL1                 0.476   endothelin converting enzyme-like 1 
ECE2                  0.037   endothelin converting enzyme 2 isoform E 
ECE2                  0.037   endothelin converting enzyme 2 isoform D 
ECE2                  0.037   endothelin converting enzyme 2 isoform B 
ECE2                  0.037   endothelin converting enzyme 2 isoform A 
ECE1                  0.016   endothelin converting enzyme 1 isoform 2 
ECE1                  0.016   endothelin converting enzyme 1 isoform 4 
ECE1                  0.016   endothelin converting enzyme 1 isoform 3 
ECE1                  0.016   endothelin converting enzyme 1 isoform 1 
ECH1                  0.016   peroxisomal enoyl-coenzyme A hydratase-like protein ...
POU5F1                0.011   POU domain, class 5, transcription factor 1 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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