Search of human proteins with 116235468

Search of human proteins with 116235468

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|116235468 MPV17 mitochondrial membrane protein-like 2 [Homo
sapiens]
         (206 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|116235468 MPV17 mitochondrial membrane protein-like 2 [Homo s...   435   e-122
gi|4505241 Mpv17 protein [Homo sapiens]                                75   4e-14
gi|8923892 peroxisomal membrane protein 2, 22kDa [Homo sapiens]        74   9e-14
gi|190358477 MPV17 mitochondrial membrane protein-like isoform 1...    72   3e-13
gi|190360560 MPV17 mitochondrial membrane protein-like isoform 2...    34   0.077
gi|29540543 sulfotransferase family, cytosolic, 1A, phenol-prefe...    33   0.17 
gi|217272870 solute carrier family 26, member 9 isoform c [Homo ...    28   7.2  
gi|16418413 solute carrier family 26, member 9 isoform a [Homo s...    28   7.2  
gi|217272867 solute carrier family 26, member 9 isoform b [Homo ...    28   7.2  

>gi|116235468 MPV17 mitochondrial membrane protein-like 2 [Homo
           sapiens]
          Length = 206

 Score =  435 bits (1118), Expect = e-122
 Identities = 206/206 (100%), Positives = 206/206 (100%)

Query: 1   MARGGWRRLRRLLSAGQLLFQGRALLVTNTLGCGALMAAGDGVRQSWEIRARPGQVFDPR 60
           MARGGWRRLRRLLSAGQLLFQGRALLVTNTLGCGALMAAGDGVRQSWEIRARPGQVFDPR
Sbjct: 1   MARGGWRRLRRLLSAGQLLFQGRALLVTNTLGCGALMAAGDGVRQSWEIRARPGQVFDPR 60

Query: 61  RSASMFAVGCSMGPFLHYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLG 120
           RSASMFAVGCSMGPFLHYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLG
Sbjct: 61  RSASMFAVGCSMGPFLHYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLG 120

Query: 121 LGCLEGQTVGESCQELREKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDT 180
           LGCLEGQTVGESCQELREKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDT
Sbjct: 121 LGCLEGQTVGESCQELREKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDT 180

Query: 181 YLSYLKYRSPVPLTPPGCVALDTRAD 206
           YLSYLKYRSPVPLTPPGCVALDTRAD
Sbjct: 181 YLSYLKYRSPVPLTPPGCVALDTRAD 206


>gi|4505241 Mpv17 protein [Homo sapiens]
          Length = 176

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 13/184 (7%)

Query: 6   WRRLRRLLSAGQLLFQGRALLVTNTLGCGALMAAGDGVRQSWEIRARPGQVFDPRRSASM 65
           WR  +R L+A     Q         L  G+LM  GD + Q   +  R  Q     R+ +M
Sbjct: 4   WRAYQRALAAHPWKVQ--------VLTAGSLMGLGDIISQQL-VERRGLQEHQRGRTLTM 54

Query: 66  FAVGCS-MGPFLHYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCL 124
            ++GC  +GP +  WY  LDR  P +      + LKK+L+DQ   +P     +   +G L
Sbjct: 55  VSLGCGFVGPVVGGWYKVLDRFIPGTTK---VDALKKMLLDQGGFAPCFLGCFLPLVGAL 111

Query: 125 EGQTVGESCQELREKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLSY 184
            G +  ++  +L+  + +    ++ +WPA Q  NF  VP  +R+  +  + + W++YLS+
Sbjct: 112 NGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSW 171

Query: 185 LKYR 188
             +R
Sbjct: 172 KAHR 175


>gi|8923892 peroxisomal membrane protein 2, 22kDa [Homo sapiens]
          Length = 195

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 59/192 (30%), Positives = 88/192 (45%), Gaps = 16/192 (8%)

Query: 2   ARGGWRRLRRLLSAGQLLFQGRALLVTNTLGCGALMAAGDGVRQSWEIR-----ARPGQV 56
           A  G   L R   A  LLF     ++T     G L A G+ + Q  E +     +R   V
Sbjct: 10  AEAGLGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDV 69

Query: 57  FDPRRSA--SMFAVGCSMGPFLHYWYLSLDRLFPAS-GLRGFPNVLKKVLVDQLVASPLL 113
             P R A    F  G    P  H++Y  ++   P    L G    L+++L+D+LV +P  
Sbjct: 70  GGPLRYAVYGFFFTG----PLSHFFYFFMEHWIPPEVPLAG----LRRLLLDRLVFAPAF 121

Query: 114 GVWYFLGLGCLEGQTVGESCQELREKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYING 173
            + +FL +  LEG+       ++R  FW   + +W VW   QF+N  +VP +FRV + N 
Sbjct: 122 LMLFFLIMNFLEGKDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANL 181

Query: 174 LTLGWDTYLSYL 185
             L W  YL+ L
Sbjct: 182 AALFWYAYLASL 193


>gi|190358477 MPV17 mitochondrial membrane protein-like isoform 1
           [Homo sapiens]
          Length = 196

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 9/157 (5%)

Query: 28  TNTLGCGALMAAGDGVRQSWEIRARPGQVFDPRRSASMFAVGCSMGPFLHYWYLSLDRLF 87
           TN L  G+L++AGD ++Q   ++ R       RR A++  V      F + W   L+R  
Sbjct: 19  TNVLLYGSLVSAGDALQQ--RLQGREANWRQTRRVATL--VVTFHANFNYVWLRLLERAL 74

Query: 88  PASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQTVGESCQELREKFWEFYKAD 147
           P    R    +L K+L DQ+V +P+    +++G+  L+G+   +   +L++KFW  Y + 
Sbjct: 75  PG---RAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQGKD--DIFLDLKQKFWNTYLSG 129

Query: 148 WCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLSY 184
              WP  Q  NF  VP Q+R  Y       W T++ +
Sbjct: 130 LMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFICF 166


>gi|190360560 MPV17 mitochondrial membrane protein-like isoform 2
           [Homo sapiens]
          Length = 147

 Score = 34.3 bits (77), Expect = 0.077
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 28  TNTLGCGALMAAGDGVRQSWEIRARPGQVFDPRRSASMFAVGCSMGPFLHYWYLSLDRLF 87
           TN L  G+L++AGD ++Q   ++ R       RR A++  V      F + W   L+R  
Sbjct: 19  TNVLLYGSLVSAGDALQQ--RLQGREANWRQTRRVATL--VVTFHANFNYVWLRLLERAL 74

Query: 88  PASGLRGFPNVLKKVLVDQLVASPL 112
           P    R    +L K+L DQ+V +P+
Sbjct: 75  PG---RAPHALLAKLLCDQVVGAPI 96


>gi|29540543 sulfotransferase family, cytosolic, 1A,
           phenol-preferring, member 1 isoform b [Homo sapiens]
          Length = 217

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 98  VLKKVLVDQLVASPLLGVWYFLGLGCLEGQTVGESCQELREKFWEFY 144
           +L K+L DQ+V +P+    ++ G+  L+G+   +   +L++KFW  Y
Sbjct: 1   MLAKLLCDQVVGAPIAVSAFYAGMSILQGK--DDIFLDLKQKFWNTY 45


>gi|217272870 solute carrier family 26, member 9 isoform c [Homo
           sapiens]
          Length = 459

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 11/119 (9%)

Query: 57  FDPRRSASMFAVGCS--MGPF--LHYWYLSLDRLFPASGLRGFPNVLKK-VLVDQLVASP 111
           +D   +  M A+GCS   G F  +H    +L       G  G   V    V +  ++   
Sbjct: 29  YDVDSNQEMIALGCSNFFGSFFKIHVICCALSVTLAVDGAGGKSQVASLCVSLVVMITML 88

Query: 112 LLGVWYF----LGLGCLEGQTVGESCQELREKF--WEFYKADWCVWPAAQFVNFLFVPP 164
           +LG++ +      LG L    +  S ++L + +  W   K D C+W  +   +F    P
Sbjct: 89  VLGIYLYPLPKSVLGALIAVNLKNSLKQLTDPYYLWRKSKLDCCIWVVSFLSSFFLSLP 147


>gi|16418413 solute carrier family 26, member 9 isoform a [Homo
           sapiens]
          Length = 791

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 11/119 (9%)

Query: 57  FDPRRSASMFAVGCS--MGPF--LHYWYLSLDRLFPASGLRGFPNVLKK-VLVDQLVASP 111
           +D   +  M A+GCS   G F  +H    +L       G  G   V    V +  ++   
Sbjct: 361 YDVDSNQEMIALGCSNFFGSFFKIHVICCALSVTLAVDGAGGKSQVASLCVSLVVMITML 420

Query: 112 LLGVWYF----LGLGCLEGQTVGESCQELREKF--WEFYKADWCVWPAAQFVNFLFVPP 164
           +LG++ +      LG L    +  S ++L + +  W   K D C+W  +   +F    P
Sbjct: 421 VLGIYLYPLPKSVLGALIAVNLKNSLKQLTDPYYLWRKSKLDCCIWVVSFLSSFFLSLP 479


>gi|217272867 solute carrier family 26, member 9 isoform b [Homo
           sapiens]
          Length = 887

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 11/119 (9%)

Query: 57  FDPRRSASMFAVGCS--MGPF--LHYWYLSLDRLFPASGLRGFPNVLKK-VLVDQLVASP 111
           +D   +  M A+GCS   G F  +H    +L       G  G   V    V +  ++   
Sbjct: 361 YDVDSNQEMIALGCSNFFGSFFKIHVICCALSVTLAVDGAGGKSQVASLCVSLVVMITML 420

Query: 112 LLGVWYF----LGLGCLEGQTVGESCQELREKF--WEFYKADWCVWPAAQFVNFLFVPP 164
           +LG++ +      LG L    +  S ++L + +  W   K D C+W  +   +F    P
Sbjct: 421 VLGIYLYPLPKSVLGALIAVNLKNSLKQLTDPYYLWRKSKLDCCIWVVSFLSSFFLSLP 479


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.143    0.484 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,653,844
Number of Sequences: 37866
Number of extensions: 384076
Number of successful extensions: 877
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 869
Number of HSP's gapped (non-prelim): 10
length of query: 206
length of database: 18,247,518
effective HSP length: 97
effective length of query: 109
effective length of database: 14,574,516
effective search space: 1588622244
effective search space used: 1588622244
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.