Search of human proteins with 237649117

Search of human proteins with 237649117

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|237649117 renalase isoform 1 [Homo sapiens]
         (342 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237649117 renalase isoform 1 [Homo sapiens]                        702   0.0  
gi|8922946 renalase isoform 2 [Homo sapiens]                          600   e-172
gi|124301196 sodium channel, nonvoltage-gated 1, beta [Homo sapi...    30   2.4  
gi|20149688 TRM2 tRNA methyltransferase 2 homolog B [Homo sapiens]     29   7.0  
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac...    28   9.1  
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]         28   9.1  

>gi|237649117 renalase isoform 1 [Homo sapiens]
          Length = 342

 Score =  702 bits (1813), Expect = 0.0
 Identities = 342/342 (100%), Positives = 342/342 (100%)

Query: 1   MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAEDSGGRMTTACSPHNPQCTADLGA 60
           MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAEDSGGRMTTACSPHNPQCTADLGA
Sbjct: 1   MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAEDSGGRMTTACSPHNPQCTADLGA 60

Query: 61  QYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLK 120
           QYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLK
Sbjct: 61  QYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLK 120

Query: 121 ESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISEC 180
           ESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISEC
Sbjct: 121 ESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISEC 180

Query: 181 QRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGP 240
           QRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGP
Sbjct: 181 QRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGP 240

Query: 241 SLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAANC 300
           SLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAANC
Sbjct: 241 SLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAANC 300

Query: 301 PGQMTLHHKPFLACGGDGFTQSNFDGCITSALCVLEALKNYI 342
           PGQMTLHHKPFLACGGDGFTQSNFDGCITSALCVLEALKNYI
Sbjct: 301 PGQMTLHHKPFLACGGDGFTQSNFDGCITSALCVLEALKNYI 342


>gi|8922946 renalase isoform 2 [Homo sapiens]
          Length = 315

 Score =  600 bits (1546), Expect = e-172
 Identities = 294/296 (99%), Positives = 295/296 (99%)

Query: 1   MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAEDSGGRMTTACSPHNPQCTADLGA 60
           MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAEDSGGRMTTACSPHNPQCTADLGA
Sbjct: 1   MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAEDSGGRMTTACSPHNPQCTADLGA 60

Query: 61  QYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLK 120
           QYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLK
Sbjct: 61  QYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLK 120

Query: 121 ESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISEC 180
           ESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISEC
Sbjct: 121 ESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISEC 180

Query: 181 QRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGP 240
           QRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGP
Sbjct: 181 QRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGP 240

Query: 241 SLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNA 296
           SLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQV +A
Sbjct: 241 SLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVPSA 296


>gi|124301196 sodium channel, nonvoltage-gated 1, beta [Homo
           sapiens]
          Length = 640

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 12/99 (12%)

Query: 240 PSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENIL-PGLPQPIATK---CQKWRHSQVTN 295
           P++ I    PF  + ++H ++D+ EL+   LE IL P L    AT+      W H+ +  
Sbjct: 93  PAVTICNASPFKYSKIKHLLKDLDELMEAVLERILAPELSHANATRNLNFSIWNHTPLVL 152

Query: 296 AAANCPGQMTLHHKPFLACGGD---GFTQSNFDGCITSA 331
                P     HH   L   GD   G T S+    I +A
Sbjct: 153 IDERNP-----HHPMVLDLFGDNHNGLTSSSASEKICNA 186


>gi|20149688 TRM2 tRNA methyltransferase 2 homolog B [Homo sapiens]
          Length = 504

 Score = 28.9 bits (63), Expect = 7.0
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 11/51 (21%)

Query: 238 IGPSLVIHTTVPFGVTYLEHSIEDVQ-----------ELVFQQLENILPGL 277
           IG SL  HT+   G+  LE ++ED +           E    Q E ILPGL
Sbjct: 358 IGLSLAQHTSRVLGIELLEQAVEDARWTAAFNGITNSEFHTGQAEKILPGL 408


>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform b [Homo sapiens]
          Length = 7968

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/49 (30%), Positives = 23/49 (46%)

Query: 143  EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYS 191
            +V  QTG   QF+ I+   P P +   +  +  + S    QQ E  +YS
Sbjct: 6365 DVQAQTGGTAQFEAIIEGDPQPSVTWYKDSVQLVDSTRLSQQQEGTTYS 6413


>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
          Length = 2115

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 129  RHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV-PEILQLQGDITTLISECQRQQLEA 187
            R  V Q+  +  K E    +GS  Q +    T P  P++  L+ +++ L  +CQ+QQ +A
Sbjct: 1084 RQTVKQLKEQLAKKEKEHASGSGAQSEAAGRTEPTGPKLEALRAEVSKLEQQCQKQQEQA 1143

Query: 188  VS 189
             S
Sbjct: 1144 DS 1145


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,634,804
Number of Sequences: 37866
Number of extensions: 610458
Number of successful extensions: 1287
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1282
Number of HSP's gapped (non-prelim): 8
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.