Search of human proteins with 22749033

Search of human proteins with 22749033

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22749033 mannosidase, endo-alpha-like isoform 2 [Homo
sapiens]
         (235 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22749033 mannosidase, endo-alpha-like isoform 2 [Homo sapiens]     506   e-144
gi|164698460 mannosidase, endo-alpha-like isoform 3 [Homo sapiens]    451   e-127
gi|41393556 mannosidase, endo-alpha [Homo sapiens]                    331   4e-91
gi|223972685 IQ motif and ubiquitin domain containing [Homo sapi...    35   0.073
gi|210032580 SET domain containing 1B [Homo sapiens]                   29   3.1  
gi|62241026 doublesex and mab-3 related transcription factor 1 [...    28   6.8  

>gi|22749033 mannosidase, endo-alpha-like isoform 2 [Homo sapiens]
          Length = 235

 Score =  506 bits (1303), Expect = e-144
 Identities = 235/235 (100%), Positives = 235/235 (100%)

Query: 1   MITGSPQMTWCPPFWTPPISTASRYGSHGAFYRYKNSMGKSLPLFYIYDSYLTSPEAWAH 60
           MITGSPQMTWCPPFWTPPISTASRYGSHGAFYRYKNSMGKSLPLFYIYDSYLTSPEAWAH
Sbjct: 1   MITGSPQMTWCPPFWTPPISTASRYGSHGAFYRYKNSMGKSLPLFYIYDSYLTSPEAWAH 60

Query: 61  LLTPNGPHSIRNTPYDGVFIALLVEEGHTHDILAAGFDGMYTYFASNGFSFGSSHQNWKA 120
           LLTPNGPHSIRNTPYDGVFIALLVEEGHTHDILAAGFDGMYTYFASNGFSFGSSHQNWKA
Sbjct: 61  LLTPNGPHSIRNTPYDGVFIALLVEEGHTHDILAAGFDGMYTYFASNGFSFGSSHQNWKA 120

Query: 121 VKNFCDANNLMFIPSVGPGYIDTSIRPWNNHNTRNRVNGKYYETALQAALTVRPEIVSIT 180
           VKNFCDANNLMFIPSVGPGYIDTSIRPWNNHNTRNRVNGKYYETALQAALTVRPEIVSIT
Sbjct: 121 VKNFCDANNLMFIPSVGPGYIDTSIRPWNNHNTRNRVNGKYYETALQAALTVRPEIVSIT 180

Query: 181 SFNEWHEGTQIEKAIPKKTPTRLYLDYLPHQPSLYLELTRRWAEHFIKEKEQWLM 235
           SFNEWHEGTQIEKAIPKKTPTRLYLDYLPHQPSLYLELTRRWAEHFIKEKEQWLM
Sbjct: 181 SFNEWHEGTQIEKAIPKKTPTRLYLDYLPHQPSLYLELTRRWAEHFIKEKEQWLM 235


>gi|164698460 mannosidase, endo-alpha-like isoform 3 [Homo sapiens]
          Length = 457

 Score =  451 bits (1161), Expect = e-127
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 25  YGSHGAFYRYKNSMGKSLPLFYIYDSYLTSPEAWAHLLTPNGPHSIRNTPYDGVFIALLV 84
           YGSHGAFYRYKNSMGKSLPLFYIYDSYLTSPEAWAHLLTPNGPHSIRNTPYDGVFIALLV
Sbjct: 247 YGSHGAFYRYKNSMGKSLPLFYIYDSYLTSPEAWAHLLTPNGPHSIRNTPYDGVFIALLV 306

Query: 85  EEGHTHDILAAGFDGMYTYFASNGFSFGSSHQNWKAVKNFCDANNLMFIPSVGPGYIDTS 144
           EEGHTHDILAAGFDGMYTYFASNGFSFGSSHQNWKAVKNFCDANNLMFIPSVGPGYIDTS
Sbjct: 307 EEGHTHDILAAGFDGMYTYFASNGFSFGSSHQNWKAVKNFCDANNLMFIPSVGPGYIDTS 366

Query: 145 IRPWNNHNTRNRVNGKYYETALQAALTVRPEIVSITSFNEWHEGTQIEKAIPKKTPTRLY 204
           IRPWNNHNTRNRVNGKYYETALQAALTVRPEIVSITSFNEWHEGTQIEKAIPKKTPTRLY
Sbjct: 367 IRPWNNHNTRNRVNGKYYETALQAALTVRPEIVSITSFNEWHEGTQIEKAIPKKTPTRLY 426

Query: 205 LDYLPHQPSLYLELTRRWAEHFIKEKEQWLM 235
           LDYLPHQPSLYLELTRRWAEHFIKEKEQWLM
Sbjct: 427 LDYLPHQPSLYLELTRRWAEHFIKEKEQWLM 457


>gi|41393556 mannosidase, endo-alpha [Homo sapiens]
          Length = 462

 Score =  331 bits (848), Expect = 4e-91
 Identities = 145/212 (68%), Positives = 177/212 (83%)

Query: 24  RYGSHGAFYRYKNSMGKSLPLFYIYDSYLTSPEAWAHLLTPNGPHSIRNTPYDGVFIALL 83
           +YG+H AFYRYK   G +LP+FY+YDSY+T PE WA+LLT +G  SIRN+PYDG+FIALL
Sbjct: 244 KYGNHPAFYRYKTKTGNALPMFYVYDSYITKPEKWANLLTTSGSRSIRNSPYDGLFIALL 303

Query: 84  VEEGHTHDILAAGFDGMYTYFASNGFSFGSSHQNWKAVKNFCDANNLMFIPSVGPGYIDT 143
           VEE H +DIL +GFDG+YTYFA+NGF++GSSHQNW ++K FCD  NL+FIPSVGPGYIDT
Sbjct: 304 VEEKHKYDILQSGFDGIYTYFATNGFTYGSSHQNWASLKLFCDKYNLIFIPSVGPGYIDT 363

Query: 144 SIRPWNNHNTRNRVNGKYYETALQAALTVRPEIVSITSFNEWHEGTQIEKAIPKKTPTRL 203
           SIRPWN  NTRNR+NGKYYE  L AAL  RP ++SITSFNEWHEGTQIEKA+PK+T   +
Sbjct: 364 SIRPWNTQNTRNRINGKYYEIGLSAALQTRPSLISITSFNEWHEGTQIEKAVPKRTSNTV 423

Query: 204 YLDYLPHQPSLYLELTRRWAEHFIKEKEQWLM 235
           YLDY PH+P LYLELTR+W+E + KE+  + +
Sbjct: 424 YLDYRPHKPGLYLELTRKWSEKYSKERATYAL 455


>gi|223972685 IQ motif and ubiquitin domain containing [Homo
           sapiens]
          Length = 791

 Score = 34.7 bits (78), Expect = 0.073
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 14/76 (18%)

Query: 159 GKYYETALQAALTVRPEIVSITSFNEWHEGTQIEKAIPKKTPTRLYLDYLPHQPSLYLEL 218
           GKY+  A   A  ++  IV  T + +WH               +++++ L  Q SL LE 
Sbjct: 326 GKYFSAAEYHAQRLKAVIVIQTYYRQWH--------------AKIFVENLRRQKSLRLEW 371

Query: 219 TRRWAEHFIKEKEQWL 234
             +     I+EKE+W+
Sbjct: 372 ETQQELRKIREKEEWI 387


>gi|210032580 SET domain containing 1B [Homo sapiens]
          Length = 1923

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 19/93 (20%), Positives = 44/93 (47%), Gaps = 11/93 (11%)

Query: 141 IDTSIRPWNNHNTRNRVNGKYYETALQAALTVR----PEIVSITSFNEWHEGTQIEKAIP 196
           ID +++    H+   R +G+++  A+ +   V     P +V I     W +  ++E ++P
Sbjct: 36  IDPALK--KGHHKLYRYDGQHFSLAMSSNRPVEIVEDPRVVGI-----WTKNKELELSVP 88

Query: 197 KKTPTRLYLDYLPHQPSLYLELTRRWAEHFIKE 229
           K      Y+  +P +   + +L     E+F+++
Sbjct: 89  KFKIDEFYVGPVPPKQVTFAKLNDNIRENFLRD 121


>gi|62241026 doublesex and mab-3 related transcription factor 1
           [Homo sapiens]
          Length = 373

 Score = 28.1 bits (61), Expect = 6.8
 Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 22  ASRYGSHGAFYRYKNSMGKSLPLFYIYDSYLTSPEAWAHLLTP 64
           +S+Y  H ++Y   + +G+S+P F+ ++   + PEA A + +P
Sbjct: 285 SSQYRMH-SYYPPPSYLGQSVPQFFTFEDAPSYPEARASVFSP 326


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,400,966
Number of Sequences: 37866
Number of extensions: 461472
Number of successful extensions: 752
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 748
Number of HSP's gapped (non-prelim): 6
length of query: 235
length of database: 18,247,518
effective HSP length: 99
effective length of query: 136
effective length of database: 14,498,784
effective search space: 1971834624
effective search space used: 1971834624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.