Search of human proteins with 224177563

Search of human proteins with 224177563

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|224177563 FGF receptor activating protein 1 isoform 2 [Homo
sapiens]
         (307 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|224177563 FGF receptor activating protein 1 isoform 2 [Homo s...   643   0.0  
gi|7657102 FGF receptor activating protein 1 isoform 1 [Homo sap...   464   e-131
gi|149192845 ubiquitin specific protease 24 [Homo sapiens]             31   1.2  
gi|58331211 elastase 2B preproprotein [Homo sapiens]                   29   4.6  
gi|62526043 chymotrypsin C preproprotein [Homo sapiens]                29   6.0  
gi|15559207 elastase 2A preproprotein [Homo sapiens]                   28   7.8  

>gi|224177563 FGF receptor activating protein 1 isoform 2 [Homo
           sapiens]
          Length = 307

 Score =  643 bits (1658), Expect = 0.0
 Identities = 307/307 (100%), Positives = 307/307 (100%)

Query: 1   MARLGSTGGVSGRVVTQHRDSAPFLGAPRLGLRELGPIRGTAPEWHGRWNAAERSDKMYQ 60
           MARLGSTGGVSGRVVTQHRDSAPFLGAPRLGLRELGPIRGTAPEWHGRWNAAERSDKMYQ
Sbjct: 1   MARLGSTGGVSGRVVTQHRDSAPFLGAPRLGLRELGPIRGTAPEWHGRWNAAERSDKMYQ 60

Query: 61  VPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGVPNYLPSV 120
           VPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGVPNYLPSV
Sbjct: 61  VPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGVPNYLPSV 120

Query: 121 SSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGLNVVE 180
           SSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGLNVVE
Sbjct: 121 SSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGLNVVE 180

Query: 181 NLALLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHTDRKSYSWKQRLF 240
           NLALLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHTDRKSYSWKQRLF
Sbjct: 181 NLALLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHTDRKSYSWKQRLF 240

Query: 241 IINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLITS 300
           IINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLITS
Sbjct: 241 IINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLITS 300

Query: 301 QPEEKRF 307
           QPEEKRF
Sbjct: 301 QPEEKRF 307


>gi|7657102 FGF receptor activating protein 1 isoform 1 [Homo
           sapiens]
          Length = 315

 Score =  464 bits (1195), Expect = e-131
 Identities = 223/248 (89%), Positives = 229/248 (92%), Gaps = 4/248 (1%)

Query: 64  PLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCGVPNYLPSVSSA 123
           PLD DGTL RLRFT +    +  P+  F FCI+WSL+FHF+ T AT CGVPNYLPSVSSA
Sbjct: 68  PLDPDGTLFRLRFTAMVWWAITFPVFGFFFCIIWSLVFHFEYTVATDCGVPNYLPSVSSA 127

Query: 124 IGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGLNVVENLA 183
           IGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGLNVVENLA
Sbjct: 128 IGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGLNVVENLA 187

Query: 184 LLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHT----DRKSYSWKQRL 239
           LLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHT    DRKSYSWKQRL
Sbjct: 188 LLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTKKHTVSQEDRKSYSWKQRL 247

Query: 240 FIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIT 299
           FIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIT
Sbjct: 248 FIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLIT 307

Query: 300 SQPEEKRF 307
           SQPEEKRF
Sbjct: 308 SQPEEKRF 315



 Score =  119 bits (299), Expect = 3e-27
 Identities = 55/55 (100%), Positives = 55/55 (100%)

Query: 58  MYQVPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCG 112
           MYQVPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCG
Sbjct: 1   MYQVPLPLDRDGTLVRLRFTMVALVTVCCPLVAFLFCILWSLLFHFKETTATHCG 55


>gi|149192845 ubiquitin specific protease 24 [Homo sapiens]
          Length = 2460

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 15/109 (13%)

Query: 117 LPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLCRLNFGL 176
           L + SSA+GG      V R       A + L A A      S  SP   YR     +  L
Sbjct: 717 LEAASSALGGPTLTHAVTR-------ATKMLTATAMPTVATSVQSP---YR-----STKL 761

Query: 177 NVVENLALLVLTYVSSSEDFTIHENAFIVFIASSLGHMLLTCILWRLTK 225
            ++E L LL   YV + EDF       +   AS  GH+L   + +  TK
Sbjct: 762 VIIERLLLLAERYVITIEDFYSVPRTILPHGASFHGHLLTLNVTYESTK 810


>gi|58331211 elastase 2B preproprotein [Homo sapiens]
          Length = 269

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 108 ATHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGL---------HSAPRFLVAFAYWNHYLS 158
           A  CGV  Y P +S  +GGE  +   W + + L         H+    L+A ++      
Sbjct: 14  ALSCGVSTYAPDMSRMLGGEEARPNSWPWQVSLQYSSNGQWYHTCGGSLIANSWVLTAAH 73

Query: 159 CTSPCSCYR 167
           C S    YR
Sbjct: 74  CISSSGIYR 82


>gi|62526043 chymotrypsin C preproprotein [Homo sapiens]
          Length = 268

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 108 ATHCGVPNYLPSVSS-AIGGEVPQRYVWRFCIGL 140
           A+ CGVP++ P++S+  +GGE  + + W + I L
Sbjct: 14  ASSCGVPSFPPNLSARVVGGEDARPHSWPWQISL 47


>gi|15559207 elastase 2A preproprotein [Homo sapiens]
          Length = 269

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 108 ATHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGL---------HSAPRFLVAFAYWNHYLS 158
           A  CG P Y P V+  +GGE  +   W + + L         H+    L+A ++      
Sbjct: 14  ALSCGDPTYPPYVTRVVGGEEARPNSWPWQVSLQYSSNGKWYHTCGGSLIANSWVLTAAH 73

Query: 159 CTSPCSCYR 167
           C S    YR
Sbjct: 74  CISSSRTYR 82


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.329    0.140    0.467 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,839,038
Number of Sequences: 37866
Number of extensions: 526263
Number of successful extensions: 1347
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1343
Number of HSP's gapped (non-prelim): 7
length of query: 307
length of database: 18,247,518
effective HSP length: 102
effective length of query: 205
effective length of database: 14,385,186
effective search space: 2948963130
effective search space used: 2948963130
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.