Search of human proteins with 215983058

Search of human proteins with 215983058

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|215983058 magnesium transporter 1 [Homo sapiens]
         (367 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|215983058 magnesium transporter 1 [Homo sapiens]                   748   0.0  
gi|30410790 tumor suppressor candidate 3 isoform b [Homo sapiens]     491   e-139
gi|30410788 tumor suppressor candidate 3 isoform a [Homo sapiens]     487   e-138
gi|110735443 delta-like 1 [Homo sapiens]                               30   3.4  

>gi|215983058 magnesium transporter 1 [Homo sapiens]
          Length = 367

 Score =  748 bits (1931), Expect = 0.0
 Identities = 367/367 (100%), Positives = 367/367 (100%)

Query: 1   MRKGKGPICLFSRPTLRPSRSKVSLIEGRGANMAARWRFWCVSVTMVVALLIVCDVPSAS 60
           MRKGKGPICLFSRPTLRPSRSKVSLIEGRGANMAARWRFWCVSVTMVVALLIVCDVPSAS
Sbjct: 1   MRKGKGPICLFSRPTLRPSRSKVSLIEGRGANMAARWRFWCVSVTMVVALLIVCDVPSAS 60

Query: 61  AQRKKEMVLSEKVSQLMEWTNKRPVIRMNGDKFRRLVKAPPRNYSVIVMFTALQLHRQCV 120
           AQRKKEMVLSEKVSQLMEWTNKRPVIRMNGDKFRRLVKAPPRNYSVIVMFTALQLHRQCV
Sbjct: 61  AQRKKEMVLSEKVSQLMEWTNKRPVIRMNGDKFRRLVKAPPRNYSVIVMFTALQLHRQCV 120

Query: 121 VCKQADEEFQILANSWRYSSAFTNRIFFAMVDFDEGSDVFQMLNMNSAPTFINFPAKGKP 180
           VCKQADEEFQILANSWRYSSAFTNRIFFAMVDFDEGSDVFQMLNMNSAPTFINFPAKGKP
Sbjct: 121 VCKQADEEFQILANSWRYSSAFTNRIFFAMVDFDEGSDVFQMLNMNSAPTFINFPAKGKP 180

Query: 181 KRGDTYELQVRGFSAEQIARWIADRTDVNIRVIRPPNYAGPLMLGLLLAVIGGLVYLRRS 240
           KRGDTYELQVRGFSAEQIARWIADRTDVNIRVIRPPNYAGPLMLGLLLAVIGGLVYLRRS
Sbjct: 181 KRGDTYELQVRGFSAEQIARWIADRTDVNIRVIRPPNYAGPLMLGLLLAVIGGLVYLRRS 240

Query: 241 NMEFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAE 300
           NMEFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAE
Sbjct: 241 NMEFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPHTGHVNYIHGSSQAQFVAE 300

Query: 301 THIVLLFNGGVTLGMVLLCEAATSDMDIGKRKIMCVAGIGLVVLFFSWMLSIFRSKYHGY 360
           THIVLLFNGGVTLGMVLLCEAATSDMDIGKRKIMCVAGIGLVVLFFSWMLSIFRSKYHGY
Sbjct: 301 THIVLLFNGGVTLGMVLLCEAATSDMDIGKRKIMCVAGIGLVVLFFSWMLSIFRSKYHGY 360

Query: 361 PYSFLMS 367
           PYSFLMS
Sbjct: 361 PYSFLMS 367


>gi|30410790 tumor suppressor candidate 3 isoform b [Homo sapiens]
          Length = 347

 Score =  491 bits (1263), Expect = e-139
 Identities = 224/324 (69%), Positives = 282/324 (87%), Gaps = 1/324 (0%)

Query: 43  SVTMVVALLIVCDVPSASAQRKKEMVLSEKVSQLMEWTNKRPVIRMNGDKFRRLVKAPPR 102
           S   ++ LL++C +     Q+KKE +L+EKV QLMEW+++R + RMNGDKFR+ +KAPPR
Sbjct: 24  SFPFLLLLLLLC-IQLGGGQKKKENLLAEKVEQLMEWSSRRSIFRMNGDKFRKFIKAPPR 82

Query: 103 NYSVIVMFTALQLHRQCVVCKQADEEFQILANSWRYSSAFTNRIFFAMVDFDEGSDVFQM 162
           NYS+IVMFTALQ  RQC VC+QA+EE+QILANSWRYSSAF N++FF+MVD+DEG+DVFQ 
Sbjct: 83  NYSMIVMFTALQPQRQCSVCRQANEEYQILANSWRYSSAFCNKLFFSMVDYDEGTDVFQQ 142

Query: 163 LNMNSAPTFINFPAKGKPKRGDTYELQVRGFSAEQIARWIADRTDVNIRVIRPPNYAGPL 222
           LNMNSAPTF++FP KG+PKR DT++LQ  GF+AEQ+A+WIADRTDV+IRV RPPNY+G +
Sbjct: 143 LNMNSAPTFMHFPPKGRPKRADTFDLQRIGFAAEQLAKWIADRTDVHIRVFRPPNYSGTI 202

Query: 223 MLGLLLAVIGGLVYLRRSNMEFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPH 282
            L LL++++GGL+YLRR+N+EF++NKTGWA  +LC V AMTSGQMWNHIRGPPYAHKNPH
Sbjct: 203 ALALLVSLVGGLLYLRRNNLEFIYNKTGWAMVSLCIVFAMTSGQMWNHIRGPPYAHKNPH 262

Query: 283 TGHVNYIHGSSQAQFVAETHIVLLFNGGVTLGMVLLCEAATSDMDIGKRKIMCVAGIGLV 342
            G V+YIHGSSQAQFVAE+HI+L+ N  +T+GMVLL EAATS  D+GKR+I+C+ G+GLV
Sbjct: 263 NGQVSYIHGSSQAQFVAESHIILVLNAAITMGMVLLNEAATSKGDVGKRRIICLVGLGLV 322

Query: 343 VLFFSWMLSIFRSKYHGYPYSFLM 366
           V FFS++LSIFRSKYHGYPYSFL+
Sbjct: 323 VFFFSFLLSIFRSKYHGYPYSFLI 346


>gi|30410788 tumor suppressor candidate 3 isoform a [Homo sapiens]
          Length = 348

 Score =  487 bits (1253), Expect = e-138
 Identities = 223/323 (69%), Positives = 280/323 (86%), Gaps = 1/323 (0%)

Query: 43  SVTMVVALLIVCDVPSASAQRKKEMVLSEKVSQLMEWTNKRPVIRMNGDKFRRLVKAPPR 102
           S   ++ LL++C +     Q+KKE +L+EKV QLMEW+++R + RMNGDKFR+ +KAPPR
Sbjct: 24  SFPFLLLLLLLC-IQLGGGQKKKENLLAEKVEQLMEWSSRRSIFRMNGDKFRKFIKAPPR 82

Query: 103 NYSVIVMFTALQLHRQCVVCKQADEEFQILANSWRYSSAFTNRIFFAMVDFDEGSDVFQM 162
           NYS+IVMFTALQ  RQC VC+QA+EE+QILANSWRYSSAF N++FF+MVD+DEG+DVFQ 
Sbjct: 83  NYSMIVMFTALQPQRQCSVCRQANEEYQILANSWRYSSAFCNKLFFSMVDYDEGTDVFQQ 142

Query: 163 LNMNSAPTFINFPAKGKPKRGDTYELQVRGFSAEQIARWIADRTDVNIRVIRPPNYAGPL 222
           LNMNSAPTF++FP KG+PKR DT++LQ  GF+AEQ+A+WIADRTDV+IRV RPPNY+G +
Sbjct: 143 LNMNSAPTFMHFPPKGRPKRADTFDLQRIGFAAEQLAKWIADRTDVHIRVFRPPNYSGTI 202

Query: 223 MLGLLLAVIGGLVYLRRSNMEFLFNKTGWAFAALCFVLAMTSGQMWNHIRGPPYAHKNPH 282
            L LL++++GGL+YLRR+N+EF++NKTGWA  +LC V AMTSGQMWNHIRGPPYAHKNPH
Sbjct: 203 ALALLVSLVGGLLYLRRNNLEFIYNKTGWAMVSLCIVFAMTSGQMWNHIRGPPYAHKNPH 262

Query: 283 TGHVNYIHGSSQAQFVAETHIVLLFNGGVTLGMVLLCEAATSDMDIGKRKIMCVAGIGLV 342
            G V+YIHGSSQAQFVAE+HI+L+ N  +T+GMVLL EAATS  D+GKR+I+C+ G+GLV
Sbjct: 263 NGQVSYIHGSSQAQFVAESHIILVLNAAITMGMVLLNEAATSKGDVGKRRIICLVGLGLV 322

Query: 343 VLFFSWMLSIFRSKYHGYPYSFL 365
           V FFS++LSIFRSKYHGYPYS L
Sbjct: 323 VFFFSFLLSIFRSKYHGYPYSDL 345


>gi|110735443 delta-like 1 [Homo sapiens]
          Length = 723

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 6   GPICLFSRPTLRPSRSKVSL---IEGRGANMAARWRFWCVSVTMVVALLIVC 54
           GP C F  P L P  + V L   +EG+G      W   C  V +V+ LL+ C
Sbjct: 513 GPNCQFLLPELPPGPAVVDLTEKLEGQGGPFP--WVAVCAGVILVLMLLLGC 562


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.138    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,722,849
Number of Sequences: 37866
Number of extensions: 546279
Number of successful extensions: 1496
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1493
Number of HSP's gapped (non-prelim): 4
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.