Search of human proteins with 21361334

Search of human proteins with 21361334

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|21361334 cystathionase isoform 1 [Homo sapiens]
         (405 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|21361334 cystathionase isoform 1 [Homo sapiens]                    822   0.0  
gi|25453487 cystathionase isoform 2 [Homo sapiens]                    708   0.0  
gi|109948292 hypothetical protein LOC57614 [Homo sapiens]              31   1.8  
gi|195972913 nasal embryonic LHRH factor isoform d [Homo sapiens]      31   2.3  
gi|195972911 nasal embryonic LHRH factor isoform c [Homo sapiens]      31   2.3  
gi|195972909 nasal embryonic LHRH factor isoform a [Homo sapiens]      31   2.3  
gi|46397396 nasal embryonic LHRH factor isoform b [Homo sapiens]       31   2.3  
gi|169881281 kynurenine aminotransferase I isoform b [Homo sapiens]    29   8.7  
gi|169881279 kynurenine aminotransferase I isoform a [Homo sapiens]    29   8.7  
gi|95147551 kynurenine aminotransferase I isoform a [Homo sapiens]     29   8.7  

>gi|21361334 cystathionase isoform 1 [Homo sapiens]
          Length = 405

 Score =  822 bits (2124), Expect = 0.0
 Identities = 405/405 (100%), Positives = 405/405 (100%)

Query: 1   MQEKDASSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEY 60
           MQEKDASSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEY
Sbjct: 1   MQEKDASSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEY 60

Query: 61  SRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRY 120
           SRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRY
Sbjct: 61  SRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRY 120

Query: 121 FRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHG 180
           FRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHG
Sbjct: 121 FRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHG 180

Query: 181 DIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQ 240
           DIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQ
Sbjct: 181 DIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQ 240

Query: 241 NSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQH 300
           NSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQH
Sbjct: 241 NSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQH 300

Query: 301 ELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVL 360
           ELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVL
Sbjct: 301 ELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVL 360

Query: 361 KNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHPPSGSHS 405
           KNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHPPSGSHS
Sbjct: 361 KNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHPPSGSHS 405


>gi|25453487 cystathionase isoform 2 [Homo sapiens]
          Length = 361

 Score =  708 bits (1828), Expect = 0.0
 Identities = 361/405 (89%), Positives = 361/405 (89%), Gaps = 44/405 (10%)

Query: 1   MQEKDASSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEY 60
           MQEKDASSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEY
Sbjct: 1   MQEKDASSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEY 60

Query: 61  SRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRY 120
           SRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRY
Sbjct: 61  SRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRY 120

Query: 121 FRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHG 180
           FRQVASEFGLKISFVDCSKIKLLEAAITPETK                            
Sbjct: 121 FRQVASEFGLKISFVDCSKIKLLEAAITPETK---------------------------- 152

Query: 181 DIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQ 240
                           RPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQ
Sbjct: 153 ----------------RPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQ 196

Query: 241 NSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQH 300
           NSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQH
Sbjct: 197 NSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQH 256

Query: 301 ELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVL 360
           ELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVL
Sbjct: 257 ELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVL 316

Query: 361 KNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHPPSGSHS 405
           KNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHPPSGSHS
Sbjct: 317 KNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHPPSGSHS 361


>gi|109948292 hypothetical protein LOC57614 [Homo sapiens]
          Length = 1216

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 9/108 (8%)

Query: 26  GQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSG---NPTRNCLEKAVAALDGAK 82
           G DP    S +   P++L ++ + G PG+ S    +  G    P R  ++   A L   +
Sbjct: 46  GLDPGSAGSLSPQDPVALGSSARPGLPGEASAAAVALGGTGETPARLSIDAIAAQLLRDQ 105

Query: 83  YCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGL 130
           Y       L A    T LL++G ++  + D +     + RQ  +  G+
Sbjct: 106 YL------LTALELHTELLESGRELPRLRDYFSNPGNFERQSGTPPGM 147


>gi|195972913 nasal embryonic LHRH factor isoform d [Homo sapiens]
          Length = 505

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 130 LKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNT 189
           LK      +K++  E  I    +L  + +  NP   VI I GC  + + +G+ +     T
Sbjct: 396 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 455

Query: 190 FMSPY---FQRPLALGA 203
            M+PY   F+ PL L A
Sbjct: 456 LMTPYRVTFESPLELSA 472


>gi|195972911 nasal embryonic LHRH factor isoform c [Homo sapiens]
          Length = 507

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 130 LKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNT 189
           LK      +K++  E  I    +L  + +  NP   VI I GC  + + +G+ +     T
Sbjct: 398 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 457

Query: 190 FMSPY---FQRPLALGA 203
            M+PY   F+ PL L A
Sbjct: 458 LMTPYRVTFESPLELSA 474


>gi|195972909 nasal embryonic LHRH factor isoform a [Homo sapiens]
          Length = 530

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 130 LKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNT 189
           LK      +K++  E  I    +L  + +  NP   VI I GC  + + +G+ +     T
Sbjct: 421 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 480

Query: 190 FMSPY---FQRPLALGA 203
            M+PY   F+ PL L A
Sbjct: 481 LMTPYRVTFESPLELSA 497


>gi|46397396 nasal embryonic LHRH factor isoform b [Homo sapiens]
          Length = 528

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 130 LKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNT 189
           LK      +K++  E  I    +L  + +  NP   VI I GC  + + +G+ +     T
Sbjct: 419 LKNKVATFAKVEKEEDMIHFWKRLSRLMSKVNPEPNVIHIMGCYILGNPNGEKLFQNLRT 478

Query: 190 FMSPY---FQRPLALGA 203
            M+PY   F+ PL L A
Sbjct: 479 LMTPYRVTFESPLELSA 495


>gi|169881281 kynurenine aminotransferase I isoform b [Homo sapiens]
          Length = 372

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 19/92 (20%)

Query: 143 LEAAITPETKLVWIETPTNPTQKVI---DIEGCAHIVHKHGDIILVVDNTF--------- 190
           L    T  TK + + TP NP  KV    ++E  A +  +H D++ + D  +         
Sbjct: 117 LAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-DVVCITDEVYQWMVYDGHQ 175

Query: 191 ------MSPYFQRPLALGADISMYSATKYMNG 216
                 +   ++R L +G+    +SAT +  G
Sbjct: 176 HISIASLPGMWERTLTIGSAGKTFSATGWKVG 207


>gi|169881279 kynurenine aminotransferase I isoform a [Homo sapiens]
          Length = 422

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 19/92 (20%)

Query: 143 LEAAITPETKLVWIETPTNPTQKVI---DIEGCAHIVHKHGDIILVVDNTF--------- 190
           L    T  TK + + TP NP  KV    ++E  A +  +H D++ + D  +         
Sbjct: 167 LAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-DVVCITDEVYQWMVYDGHQ 225

Query: 191 ------MSPYFQRPLALGADISMYSATKYMNG 216
                 +   ++R L +G+    +SAT +  G
Sbjct: 226 HISIASLPGMWERTLTIGSAGKTFSATGWKVG 257


>gi|95147551 kynurenine aminotransferase I isoform a [Homo sapiens]
          Length = 422

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 19/92 (20%)

Query: 143 LEAAITPETKLVWIETPTNPTQKVI---DIEGCAHIVHKHGDIILVVDNTF--------- 190
           L    T  TK + + TP NP  KV    ++E  A +  +H D++ + D  +         
Sbjct: 167 LAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-DVVCITDEVYQWMVYDGHQ 225

Query: 191 ------MSPYFQRPLALGADISMYSATKYMNG 216
                 +   ++R L +G+    +SAT +  G
Sbjct: 226 HISIASLPGMWERTLTIGSAGKTFSATGWKVG 257


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,764,799
Number of Sequences: 37866
Number of extensions: 674055
Number of successful extensions: 1528
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1525
Number of HSP's gapped (non-prelim): 11
length of query: 405
length of database: 18,247,518
effective HSP length: 105
effective length of query: 300
effective length of database: 14,271,588
effective search space: 4281476400
effective search space used: 4281476400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.