Search of human proteins with 209571523

Search of human proteins with 209571523

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|209571523 dolichyl pyrophosphate phosphatase 1 isoform b
[Homo sapiens]
         (195 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|209571523 dolichyl pyrophosphate phosphatase 1 isoform b [Hom...   399   e-112
gi|30794376 dolichyl pyrophosphate phosphatase 1 isoform a [Homo...   378   e-105
gi|40217829 G protein-coupled receptor 68 [Homo sapiens]               31   0.76 
gi|82659094 phosphatidic acid phosphatase type 2d isoform 1 [Hom...    28   6.5  
gi|61102719 phosphatidic acid phosphatase type 2d isoform 2 [Hom...    28   6.5  

>gi|209571523 dolichyl pyrophosphate phosphatase 1 isoform b [Homo
           sapiens]
          Length = 195

 Score =  399 bits (1025), Expect = e-112
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MAADGQCSLPASWRPVTLTHVEYPAGDLSGHLLAYLSLSPVFVIVGFVTLIIFKRELHTI 60
           MAADGQCSLPASWRPVTLTHVEYPAGDLSGHLLAYLSLSPVFVIVGFVTLIIFKRELHTI
Sbjct: 1   MAADGQCSLPASWRPVTLTHVEYPAGDLSGHLLAYLSLSPVFVIVGFVTLIIFKRELHTI 60

Query: 61  SFLGGLALNEGVNWLIKNVIQEPRPCGGPHTAVGTKYGMPSSHSQFMWFFSVYSFLFLYL 120
           SFLGGLALNEGVNWLIKNVIQEPRPCGGPHTAVGTKYGMPSSHSQFMWFFSVYSFLFLYL
Sbjct: 61  SFLGGLALNEGVNWLIKNVIQEPRPCGGPHTAVGTKYGMPSSHSQFMWFFSVYSFLFLYL 120

Query: 121 RMHQTNNARFLDLLWRHVLSLGLLAVAFLVSYSRPVSEFFLIRDTSLIPNVLWFEYTVTR 180
           RMHQTNNARFLDLLWRHVLSLGLLAVAFLVSYSRPVSEFFLIRDTSLIPNVLWFEYTVTR
Sbjct: 121 RMHQTNNARFLDLLWRHVLSLGLLAVAFLVSYSRPVSEFFLIRDTSLIPNVLWFEYTVTR 180

Query: 181 AEARNRQRKLGTKLQ 195
           AEARNRQRKLGTKLQ
Sbjct: 181 AEARNRQRKLGTKLQ 195


>gi|30794376 dolichyl pyrophosphate phosphatase 1 isoform a [Homo
           sapiens]
          Length = 238

 Score =  378 bits (971), Expect = e-105
 Identities = 195/238 (81%), Positives = 195/238 (81%), Gaps = 43/238 (18%)

Query: 1   MAADGQCSLPASWRPVTLTHVEYPAGDLSGHLLAYLSLSPVFVIVGFVTLIIFKRELHTI 60
           MAADGQCSLPASWRPVTLTHVEYPAGDLSGHLLAYLSLSPVFVIVGFVTLIIFKRELHTI
Sbjct: 1   MAADGQCSLPASWRPVTLTHVEYPAGDLSGHLLAYLSLSPVFVIVGFVTLIIFKRELHTI 60

Query: 61  SFLGGLALNEGVNWLIKNVIQEPRPCGGPHTAVGTKYGMPSSHSQFMWFFSVYSFLFLYL 120
           SFLGGLALNEGVNWLIKNVIQEPRPCGGPHTAVGTKYGMPSSHSQFMWFFSVYSFLFLYL
Sbjct: 61  SFLGGLALNEGVNWLIKNVIQEPRPCGGPHTAVGTKYGMPSSHSQFMWFFSVYSFLFLYL 120

Query: 121 RMHQTNNARFLDLLWRHVLSLGLLAVAFLVSYSR-------------------------- 154
           RMHQTNNARFLDLLWRHVLSLGLLAVAFLVSYSR                          
Sbjct: 121 RMHQTNNARFLDLLWRHVLSLGLLAVAFLVSYSRVYLLYHTWSQVLYGGIAGGLMAIAWF 180

Query: 155 -----------------PVSEFFLIRDTSLIPNVLWFEYTVTRAEARNRQRKLGTKLQ 195
                            PVSEFFLIRDTSLIPNVLWFEYTVTRAEARNRQRKLGTKLQ
Sbjct: 181 IFTQEVLTPLFPRIAAWPVSEFFLIRDTSLIPNVLWFEYTVTRAEARNRQRKLGTKLQ 238


>gi|40217829 G protein-coupled receptor 68 [Homo sapiens]
          Length = 375

 Score = 30.8 bits (68), Expect = 0.76
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 7   CSLPASWRPVTLTHVEYPAGDLSGHLLAYLSLSPVFVIVGFVTLIIFKREL 57
           CSLP  W    L H  +  GDLS  +   L    +++ VGF+  I   R L
Sbjct: 82  CSLPF-WLQYVLQHDNWSHGDLSCQVCGILLYENIYISVGFLCCISVDRYL 131


>gi|82659094 phosphatidic acid phosphatase type 2d isoform 1 [Homo
           sapiens]
          Length = 321

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 87  GGPHTAVGTKYGMPSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLAV 146
           G P   +  +   PS  +      SVY+ ++L + +  T  A+   L  + VL LGL+ +
Sbjct: 179 GNPDLIMRARKTFPSKEAAL----SVYAAMYLTMYITNTIKAKGTRLA-KPVLCLGLMCL 233

Query: 147 AFLVSYSRPVSEF 159
           AFL   +R V+E+
Sbjct: 234 AFLTGLNR-VAEY 245


>gi|61102719 phosphatidic acid phosphatase type 2d isoform 2 [Homo
           sapiens]
          Length = 316

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 87  GGPHTAVGTKYGMPSSHSQFMWFFSVYSFLFLYLRMHQTNNARFLDLLWRHVLSLGLLAV 146
           G P   +  +   PS  +      SVY+ ++L + +  T  A+   L  + VL LGL+ +
Sbjct: 179 GNPDLIMRARKTFPSKEAAL----SVYAAMYLTMYITNTIKAKGTRLA-KPVLCLGLMCL 233

Query: 147 AFLVSYSRPVSEF 159
           AFL   +R V+E+
Sbjct: 234 AFLTGLNR-VAEY 245


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.140    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,589,644
Number of Sequences: 37866
Number of extensions: 321322
Number of successful extensions: 719
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 716
Number of HSP's gapped (non-prelim): 6
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.