Search of human proteins with 207113139

Search of human proteins with 207113139

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|207113139 degenerative spermatocyte homolog 2, lipid
desaturase [Homo sapiens]
         (323 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|207113139 degenerative spermatocyte homolog 2, lipid desatura...   688   0.0  
gi|21614501 degenerative spermatocyte homolog 1, lipid desaturas...   480   e-136
gi|4505193 degenerative spermatocyte homolog 1, lipid desaturase...   480   e-136
gi|4758334 fatty acid desaturase 2 [Homo sapiens]                      33   0.45 
gi|13375616 fatty acid desaturase 3 [Homo sapiens]                     32   0.76 
gi|214831730 fatty acid desaturase 1 [Homo sapiens]                    30   2.2  
gi|188497625 3-hydroxyanthranilate 3,4-dioxygenase [Homo sapiens]      28   8.4  

>gi|207113139 degenerative spermatocyte homolog 2, lipid desaturase
           [Homo sapiens]
          Length = 323

 Score =  688 bits (1776), Expect = 0.0
 Identities = 323/323 (100%), Positives = 323/323 (100%)

Query: 1   MGNSASRSDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLACWL 60
           MGNSASRSDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLACWL
Sbjct: 1   MGNSASRSDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLACWL 60

Query: 61  VRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPY 120
           VRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPY
Sbjct: 61  VRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPY 120

Query: 121 AASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPK 180
           AASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPK
Sbjct: 121 AASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPK 180

Query: 181 AVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHPISGHFVAEHYMFLKGH 240
           AVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHPISGHFVAEHYMFLKGH
Sbjct: 181 AVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHPISGHFVAEHYMFLKGH 240

Query: 241 ETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEYYDHLPQHHSWVKVLWDF 300
           ETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEYYDHLPQHHSWVKVLWDF
Sbjct: 241 ETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEYYDHLPQHHSWVKVLWDF 300

Query: 301 VFEDSLGPYARVKRVYRLAKDGL 323
           VFEDSLGPYARVKRVYRLAKDGL
Sbjct: 301 VFEDSLGPYARVKRVYRLAKDGL 323


>gi|21614501 degenerative spermatocyte homolog 1, lipid desaturase
           [Homo sapiens]
          Length = 323

 Score =  480 bits (1235), Expect = e-136
 Identities = 205/314 (65%), Positives = 264/314 (84%)

Query: 1   MGNSASRSDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLACWL 60
           MG+  SR DFEWVYTDQPH  RR+EILAKYP IK+LM+PDP L W ++++VL Q+ A ++
Sbjct: 1   MGSRVSREDFEWVYTDQPHADRRREILAKYPEIKSLMKPDPNLIWIIIMMVLTQLGAFYI 60

Query: 61  VRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPY 120
           V+ L W+W++F AYAFG C+NHS+TLAIH+I+HNAAFG  +A  NRW  +FANLP+G+PY
Sbjct: 61  VKDLDWKWVIFGAYAFGSCINHSMTLAIHEIAHNAAFGNCKAMWNRWFGMFANLPIGIPY 120

Query: 121 AASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPK 180
           + SFK+YH+DHHRYLG DG+DVD+PT  EGWFFCT  RK +W++LQP FY+ RPL ++PK
Sbjct: 121 SISFKRYHMDHHRYLGADGVDVDIPTDFEGWFFCTAFRKFIWVILQPLFYAFRPLFINPK 180

Query: 181 AVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHPISGHFVAEHYMFLKGH 240
            +T +EV+NT+ Q+  D+ I+   G+K +VY+LA+S LGLGLHPISGHF+AEHYMFLKGH
Sbjct: 181 PITYLEVINTVAQVTFDILIYYFLGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGH 240

Query: 241 ETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEYYDHLPQHHSWVKVLWDF 300
           ETYSYYGPLN +TFNVGYH EHHDFP+IPG +LPLVRKIA EYYD+LP ++SW+KVL+DF
Sbjct: 241 ETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDF 300

Query: 301 VFEDSLGPYARVKR 314
           V +D++ PY+R+KR
Sbjct: 301 VMDDTISPYSRMKR 314


>gi|4505193 degenerative spermatocyte homolog 1, lipid desaturase
           [Homo sapiens]
          Length = 323

 Score =  480 bits (1235), Expect = e-136
 Identities = 205/314 (65%), Positives = 264/314 (84%)

Query: 1   MGNSASRSDFEWVYTDQPHTQRRKEILAKYPAIKALMRPDPRLKWAVLVLVLVQMLACWL 60
           MG+  SR DFEWVYTDQPH  RR+EILAKYP IK+LM+PDP L W ++++VL Q+ A ++
Sbjct: 1   MGSRVSREDFEWVYTDQPHADRRREILAKYPEIKSLMKPDPNLIWIIIMMVLTQLGAFYI 60

Query: 61  VRGLAWRWLLFWAYAFGGCVNHSLTLAIHDISHNAAFGTGRAARNRWLAVFANLPVGVPY 120
           V+ L W+W++F AYAFG C+NHS+TLAIH+I+HNAAFG  +A  NRW  +FANLP+G+PY
Sbjct: 61  VKDLDWKWVIFGAYAFGSCINHSMTLAIHEIAHNAAFGNCKAMWNRWFGMFANLPIGIPY 120

Query: 121 AASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFYSLRPLCVHPK 180
           + SFK+YH+DHHRYLG DG+DVD+PT  EGWFFCT  RK +W++LQP FY+ RPL ++PK
Sbjct: 121 SISFKRYHMDHHRYLGADGVDVDIPTDFEGWFFCTAFRKFIWVILQPLFYAFRPLFINPK 180

Query: 181 AVTRMEVLNTLVQLAADLAIFALWGLKPVVYLLASSFLGLGLHPISGHFVAEHYMFLKGH 240
            +T +EV+NT+ Q+  D+ I+   G+K +VY+LA+S LGLGLHPISGHF+AEHYMFLKGH
Sbjct: 181 PITYLEVINTVAQVTFDILIYYFLGIKSLVYMLAASLLGLGLHPISGHFIAEHYMFLKGH 240

Query: 241 ETYSYYGPLNWITFNVGYHVEHHDFPSIPGYNLPLVRKIAPEYYDHLPQHHSWVKVLWDF 300
           ETYSYYGPLN +TFNVGYH EHHDFP+IPG +LPLVRKIA EYYD+LP ++SW+KVL+DF
Sbjct: 241 ETYSYYGPLNLLTFNVGYHNEHHDFPNIPGKSLPLVRKIAAEYYDNLPHYNSWIKVLYDF 300

Query: 301 VFEDSLGPYARVKR 314
           V +D++ PY+R+KR
Sbjct: 301 VMDDTISPYSRMKR 314


>gi|4758334 fatty acid desaturase 2 [Homo sapiens]
          Length = 444

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 3/32 (9%)

Query: 250 NWITFNVGYHVEHHDFPSIPGYNLPLVRKIAP 281
           +W + ++ + +EHH FP++P +NL    KIAP
Sbjct: 373 DWFSGHLNFQIEHHLFPTMPRHNL---HKIAP 401


>gi|13375616 fatty acid desaturase 3 [Homo sapiens]
          Length = 445

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 4/38 (10%)

Query: 250 NWITFNVGYHVEHHDFPSIPGYN----LPLVRKIAPEY 283
           NW + ++ + +EHH FP +P +N     PLV+ +  ++
Sbjct: 374 NWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKH 411


>gi|214831730 fatty acid desaturase 1 [Homo sapiens]
          Length = 501

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 3/32 (9%)

Query: 250 NWITFNVGYHVEHHDFPSIPGYNLPLVRKIAP 281
           +W + ++ + +EHH FP++P +N     K+AP
Sbjct: 430 DWFSGHLNFQIEHHLFPTMPRHN---YHKVAP 458


>gi|188497625 3-hydroxyanthranilate 3,4-dioxygenase [Homo sapiens]
          Length = 286

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)

Query: 111 FANLPVGVPYAASFKKYHVDHHRYLGGDGLDVDVPTRLEGWFFCTPARKLLWLVLQPFFY 170
           FAN  VG+       +  +D  RY  GD +DV      E WF+C      L  ++Q FF 
Sbjct: 96  FANT-VGLVVERRRLETELDGLRYYVGDTMDV----LFEKWFYCKDLGTQLAPIIQEFFS 150

Query: 171 S 171
           S
Sbjct: 151 S 151


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.142    0.486 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,286,169
Number of Sequences: 37866
Number of extensions: 599560
Number of successful extensions: 1226
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1220
Number of HSP's gapped (non-prelim): 7
length of query: 323
length of database: 18,247,518
effective HSP length: 102
effective length of query: 221
effective length of database: 14,385,186
effective search space: 3179126106
effective search space used: 3179126106
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.