BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|205360941 uridine phosphorylase 2 isoform b [Homo sapiens] (374 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|205360941 uridine phosphorylase 2 isoform b [Homo sapiens] 763 0.0 gi|27597096 uridine phosphorylase 2 isoform a [Homo sapiens] 647 0.0 gi|31742508 uridine phosphorylase 1 [Homo sapiens] 386 e-107 gi|4507839 uridine phosphorylase 1 [Homo sapiens] 386 e-107 gi|24308324 fatty acyl CoA reductase 1 [Homo sapiens] 32 0.71 gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 29 7.8 >gi|205360941 uridine phosphorylase 2 isoform b [Homo sapiens] Length = 374 Score = 763 bits (1969), Expect = 0.0 Identities = 374/374 (100%), Positives = 374/374 (100%) Query: 1 MLAPGCELDPDQEVVRTRPEDVPASPSTSTMIVSVLRPPSHASCTACGTVTFHIVERMAS 60 MLAPGCELDPDQEVVRTRPEDVPASPSTSTMIVSVLRPPSHASCTACGTVTFHIVERMAS Sbjct: 1 MLAPGCELDPDQEVVRTRPEDVPASPSTSTMIVSVLRPPSHASCTACGTVTFHIVERMAS 60 Query: 61 VIPASNRSMRSDRNTYVGKRFVHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVC 120 VIPASNRSMRSDRNTYVGKRFVHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVC Sbjct: 61 VIPASNRSMRSDRNTYVGKRFVHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVC 120 Query: 121 VGGSPNRMKAFALFMHKELGFEEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPSISI 180 VGGSPNRMKAFALFMHKELGFEEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPSISI Sbjct: 121 VGGSPNRMKAFALFMHKELGFEEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPSISI 180 Query: 181 MLHELIKLLHHARCCDVTIIRIGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDNIVT 240 MLHELIKLLHHARCCDVTIIRIGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDNIVT Sbjct: 181 MLHELIKLLHHARCCDVTIIRIGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDNIVT 240 Query: 241 RSTELDKELSEELFNCSKEIPNFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLDYLK 300 RSTELDKELSEELFNCSKEIPNFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLDYLK Sbjct: 241 RSTELDKELSEELFNCSKEIPNFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLDYLK 300 Query: 301 RAFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQRPQL 360 RAFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQRPQL Sbjct: 301 RAFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQRPQL 360 Query: 361 LISNFIRRRLGLCD 374 LISNFIRRRLGLCD Sbjct: 361 LISNFIRRRLGLCD 374 >gi|27597096 uridine phosphorylase 2 isoform a [Homo sapiens] Length = 317 Score = 647 bits (1668), Expect = 0.0 Identities = 317/317 (100%), Positives = 317/317 (100%) Query: 58 MASVIPASNRSMRSDRNTYVGKRFVHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVK 117 MASVIPASNRSMRSDRNTYVGKRFVHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVK Sbjct: 1 MASVIPASNRSMRSDRNTYVGKRFVHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVK 60 Query: 118 FVCVGGSPNRMKAFALFMHKELGFEEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPS 177 FVCVGGSPNRMKAFALFMHKELGFEEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPS Sbjct: 61 FVCVGGSPNRMKAFALFMHKELGFEEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPS 120 Query: 178 ISIMLHELIKLLHHARCCDVTIIRIGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDN 237 ISIMLHELIKLLHHARCCDVTIIRIGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDN Sbjct: 121 ISIMLHELIKLLHHARCCDVTIIRIGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDN 180 Query: 238 IVTRSTELDKELSEELFNCSKEIPNFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLD 297 IVTRSTELDKELSEELFNCSKEIPNFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLD Sbjct: 181 IVTRSTELDKELSEELFNCSKEIPNFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLD 240 Query: 298 YLKRAFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQR 357 YLKRAFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQR Sbjct: 241 YLKRAFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQR 300 Query: 358 PQLLISNFIRRRLGLCD 374 PQLLISNFIRRRLGLCD Sbjct: 301 PQLLISNFIRRRLGLCD 317 >gi|31742508 uridine phosphorylase 1 [Homo sapiens] Length = 310 Score = 386 bits (992), Expect = e-107 Identities = 191/289 (66%), Positives = 231/289 (79%) Query: 82 VHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVCVGGSPNRMKAFALFMHKELGF 141 V + NP + M EDILYH +L T HN PA+FGDVKFVCVGGSP+RMKAF + ELG Sbjct: 19 VRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGGSPSRMKAFIRCVGAELGL 78 Query: 142 EEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPSISIMLHELIKLLHHARCCDVTIIR 201 + D +ICAGTDRY MYK GPVL++SHGMGIPSISIMLHELIKLL++ARC +VTIIR Sbjct: 79 DCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLHELIKLLYYARCSNVTIIR 138 Query: 202 IGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDNIVTRSTELDKELSEELFNCSKEIP 261 IGTSGGIG+ PGTVVIT+ AVD+ FK FEQ++L V R T+L+K+L +EL CS E+ Sbjct: 139 IGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKTDLNKKLVQELLLCSAELS 198 Query: 262 NFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLDYLKRAFKAGVRNIEMESTVFAAMC 321 F T+VG+TMCT DFYEGQGRLDGALCS++ + K YL+ A+ AGVRNIEMES+VFAAMC Sbjct: 199 EFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAYAAGVRNIEMESSVFAAMC 258 Query: 322 GLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQRPQLLISNFIRRRL 370 CGL+AAVVCVTLL+RL+ DQI+ P +VL EYQQRPQ L+S FI+++L Sbjct: 259 SACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVSYFIKKKL 307 >gi|4507839 uridine phosphorylase 1 [Homo sapiens] Length = 310 Score = 386 bits (992), Expect = e-107 Identities = 191/289 (66%), Positives = 231/289 (79%) Query: 82 VHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVCVGGSPNRMKAFALFMHKELGF 141 V + NP + M EDILYH +L T HN PA+FGDVKFVCVGGSP+RMKAF + ELG Sbjct: 19 VRLLNPNIAKMKEDILYHFNLTTSRHNFPALFGDVKFVCVGGSPSRMKAFIRCVGAELGL 78 Query: 142 EEAEEDIKDICAGTDRYCMYKTGPVLAISHGMGIPSISIMLHELIKLLHHARCCDVTIIR 201 + D +ICAGTDRY MYK GPVL++SHGMGIPSISIMLHELIKLL++ARC +VTIIR Sbjct: 79 DCPGRDYPNICAGTDRYAMYKVGPVLSVSHGMGIPSISIMLHELIKLLYYARCSNVTIIR 138 Query: 202 IGTSGGIGIAPGTVVITDIAVDSFFKPRFEQVILDNIVTRSTELDKELSEELFNCSKEIP 261 IGTSGGIG+ PGTVVIT+ AVD+ FK FEQ++L V R T+L+K+L +EL CS E+ Sbjct: 139 IGTSGGIGLEPGTVVITEQAVDTCFKAEFEQIVLGKRVIRKTDLNKKLVQELLLCSAELS 198 Query: 262 NFPTLVGHTMCTYDFYEGQGRLDGALCSFSREKKLDYLKRAFKAGVRNIEMESTVFAAMC 321 F T+VG+TMCT DFYEGQGRLDGALCS++ + K YL+ A+ AGVRNIEMES+VFAAMC Sbjct: 199 EFTTVVGNTMCTLDFYEGQGRLDGALCSYTEKDKQAYLEAAYAAGVRNIEMESSVFAAMC 258 Query: 322 GLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQRPQLLISNFIRRRL 370 CGL+AAVVCVTLL+RL+ DQI+ P +VL EYQQRPQ L+S FI+++L Sbjct: 259 SACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRPQRLVSYFIKKKL 307 >gi|24308324 fatty acyl CoA reductase 1 [Homo sapiens] Length = 515 Score = 32.3 bits (72), Expect = 0.71 Identities = 33/128 (25%), Positives = 48/128 (37%), Gaps = 15/128 (11%) Query: 19 PEDVPASPSTSTMIVSVLRPPSHA---SCTACGTVTFHIVERMASVIPASNRSMRSDRNT 75 P DV + S + S + P + +CT T FH E VI R+ Sbjct: 277 PVDVVVNMSLAAAWYSGVNRPRNIMVYNCTTGSTNPFHWGEVEYHVISTFKRNPLEQA-- 334 Query: 76 YVGKRFVHVKNPYLDLMDEDILYHLDLGTKTHNLPAMFGDVKFVCVGGSPNRMKAFALFM 135 + P ++L +LYH + +H PA D+ G SP MK + Sbjct: 335 --------FRRPNVNLTSNHLLYHYWIAV-SHKAPAFLYDIYLRMTGRSPRMMKTITR-L 384 Query: 136 HKELGFEE 143 HK + F E Sbjct: 385 HKAMVFLE 392 >gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] Length = 2240 Score = 28.9 bits (63), Expect = 7.8 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Query: 7 ELDP-DQEVVRTRPE--DVPASPSTSTMIVSVLRPPSHASCTACGTVT 51 ELD D++ R +PE DVPA P +T+ S +P + C+A V+ Sbjct: 1207 ELDKMDEKRTRLQPEEADVPAYPKVATVPQSEKKPSKYPLCSADAAVS 1254 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.324 0.140 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,588,394 Number of Sequences: 37866 Number of extensions: 633494 Number of successful extensions: 1843 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 1839 Number of HSP's gapped (non-prelim): 6 length of query: 374 length of database: 18,247,518 effective HSP length: 104 effective length of query: 270 effective length of database: 14,309,454 effective search space: 3863552580 effective search space used: 3863552580 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.