Search of human proteins with 20270341

Search of human proteins with 20270341

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|20270341 lysophospholipase-like 1 [Homo sapiens]
         (237 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|20270341 lysophospholipase-like 1 [Homo sapiens]                   483   e-137
gi|5453722 lysophospholipase 1 [Homo sapiens]                         106   2e-23
gi|9966764 lysophospholipase II [Homo sapiens]                        104   6e-23
gi|49355781 abhydrolase domain containing 13 [Homo sapiens]            34   0.13 
gi|37700256 transmembrane protein 95 [Homo sapiens]                    29   4.1  
gi|160420295 hypothetical protein LOC85459 [Homo sapiens]              28   6.9  

>gi|20270341 lysophospholipase-like 1 [Homo sapiens]
          Length = 237

 Score =  483 bits (1243), Expect = e-137
 Identities = 237/237 (100%), Positives = 237/237 (100%)

Query: 1   MAAASGSVLQRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPT 60
           MAAASGSVLQRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPT
Sbjct: 1   MAAASGSVLQRCIVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPT 60

Query: 61  APPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILI 120
           APPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILI
Sbjct: 61  APPRSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILI 120

Query: 121 GGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHGTADE 180
           GGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHGTADE
Sbjct: 121 GGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHGTADE 180

Query: 181 LVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTKLPGEMEKQK 237
           LVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTKLPGEMEKQK
Sbjct: 181 LVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTELDILKLWILTKLPGEMEKQK 237


>gi|5453722 lysophospholipase 1 [Homo sapiens]
          Length = 230

 Score =  106 bits (264), Expect = 2e-23
 Identities = 74/220 (33%), Positives = 107/220 (48%), Gaps = 7/220 (3%)

Query: 13  IVSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGG 72
           IV  A + +A++IFLHG GD+G G   W +      +   HIK I P AP R  T     
Sbjct: 13  IVPAARKATAAVIFLHGLGDTGHG---WAEAFAG--IRSSHIKYICPHAPVRPVTLNMNV 67

Query: 73  ISNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMH 132
               WFD   ++ D  E    I    + +  LID+EVK+GI  NRI++GGFS GG ++++
Sbjct: 68  AMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLY 127

Query: 133 LAYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHGTADELVLHSWAEETNS 192
            A    Q +AGV ALS +L   ++  Q           + QCHG  D LV   +   T  
Sbjct: 128 TALTTQQKLAGVTALSCWLPLRASFPQGPIGGANRDISILQCHGDCDPLVPLMFGSLTVE 187

Query: 193 MLKSL--GVTTKFHSFPNVYHELSKTELDILKLWILTKLP 230
            LK+L       F ++  + H   + E+  +K +I   LP
Sbjct: 188 KLKTLVNPANVTFKTYEGMMHSSCQQEMMDVKQFIDKLLP 227


>gi|9966764 lysophospholipase II [Homo sapiens]
          Length = 231

 Score =  104 bits (260), Expect = 6e-23
 Identities = 73/221 (33%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 14  VSPAGRHSASLIFLHGSGDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGI 73
           VS A R +A++IFLHG GD+G     W   +    +   H+K I P AP    T     +
Sbjct: 17  VSGAERETAAVIFLHGLGDTGHS---WADAL--STIRLPHVKYICPHAPRIPVTLNMKMV 71

Query: 74  SNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHL 133
              WFD   ++ D PE    I    + +  LI+ E+K+GI  NRI++GGFS GG ++++ 
Sbjct: 72  MPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYT 131

Query: 134 AYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPEL--FQCHGTADELVLHSWAEETN 191
           A      +AG+ ALS +L    A  QA   +NG   +L   QCHG  D +V   +   T 
Sbjct: 132 ALTCPHPLAGIVALSCWLPLHRAFPQA---ANGSAKDLAILQCHGELDPMVPVRFGALTA 188

Query: 192 SMLKSL--GVTTKFHSFPNVYHELSKTELDILKLWILTKLP 230
             L+S+      +F ++P V H     E+  +K ++   LP
Sbjct: 189 EKLRSVVTPARVQFKTYPGVMHSSCPQEMAAVKEFLEKLLP 229


>gi|49355781 abhydrolase domain containing 13 [Homo sapiens]
          Length = 337

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 26/134 (19%)

Query: 20  HSASLIFLHGS-GDSGQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWF 78
           +S ++I+ HG+ G+ G  L   +  ++N       +K+       R Y   +G  S    
Sbjct: 113 YSPTIIYFHGNAGNIGHRLPNALLMLVN-------LKVNLLLVDYRGYGKSEGEASEEGL 165

Query: 79  DRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNH 138
                      +L+S  V+  V+T       +  + K +I + G S+GG +A+HLA  N 
Sbjct: 166 -----------YLDSEAVLDYVMT-------RPDLDKTKIFLFGRSLGGAVAIHLASENS 207

Query: 139 QDVAGVFALSSFLN 152
             ++ +   ++FL+
Sbjct: 208 HRISAIMVENTFLS 221


>gi|37700256 transmembrane protein 95 [Homo sapiens]
          Length = 184

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 8/102 (7%)

Query: 117 RILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQALQKSNGVLPELFQCHG 176
           R+ +GG  +    A         D++G  A      +  +  +A QK  G  P+      
Sbjct: 3   RLALGGVFLAAAQACVFCRLPAHDLSGRLA------RLCSQMEARQKECGASPDFSAF-- 54

Query: 177 TADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELSKTEL 218
             DE+ ++   E+T+ +L+ + +     S P+ +  L KT+L
Sbjct: 55  ALDEVSMNKVTEKTHRVLRVMEIKEAVSSLPSYWSWLRKTKL 96


>gi|160420295 hypothetical protein LOC85459 [Homo sapiens]
          Length = 2601

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%)

Query: 147  LSSFLNKASAVYQALQKSN---GVLPELFQ--CHGTADELVLHSWAEETNSMLKSLGVTT 201
            +SS +     +YQ    S+    +LP + +  C  T  + ++  +  E N + +   +  
Sbjct: 2007 ISSIVPSTQDIYQRQNSSDVHKSLLPAVDETTCGHTHFQQMIDKYINEANLIPEKTDLQE 2066

Query: 202  KFHSFPNVYHELSK 215
              H FPN++H+L K
Sbjct: 2067 LEHIFPNLHHQLFK 2080


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,104,964
Number of Sequences: 37866
Number of extensions: 373385
Number of successful extensions: 709
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 701
Number of HSP's gapped (non-prelim): 6
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.