Search of human proteins with 19923821

Search of human proteins with 19923821

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19923821 dihydropyrimidinase-like 5 [Homo sapiens]
         (564 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19923821 dihydropyrimidinase-like 5 [Homo sapiens]                1142   0.0  
gi|4503375 dihydropyrimidinase [Homo sapiens]                         606   e-173
gi|62422571 collapsin response mediator protein 1 isoform 1 [Hom...   588   e-168
gi|4503377 dihydropyrimidinase-like 2 [Homo sapiens]                  587   e-167
gi|4503051 collapsin response mediator protein 1 isoform 2 [Homo...   586   e-167
gi|4503379 dihydropyrimidinase-like 3 [Homo sapiens]                  581   e-166
gi|190194363 dihydropyrimidinase-like 4 [Homo sapiens]                567   e-161
gi|18105007 carbamoylphosphate synthetase 2/aspartate transcarba...    52   1e-06
gi|10863929 ribonuclease L [Homo sapiens]                              31   2.6  
gi|149363672 sarcalumenin [Homo sapiens]                               30   4.5  

>gi|19923821 dihydropyrimidinase-like 5 [Homo sapiens]
          Length = 564

 Score = 1142 bits (2953), Expect = 0.0
 Identities = 564/564 (100%), Positives = 564/564 (100%)

Query: 1   MLANSASVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIP 60
           MLANSASVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIP
Sbjct: 1   MLANSASVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIP 60

Query: 61  GGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLA 120
           GGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLA
Sbjct: 61  GGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLA 120

Query: 121 DPKVCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHA 180
           DPKVCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHA
Sbjct: 121 DPKVCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHA 180

Query: 181 CKDIGAIARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTH 240
           CKDIGAIARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTH
Sbjct: 181 CKDIGAIARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTH 240

Query: 241 CPIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPL 300
           CPIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPL
Sbjct: 241 CPIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPL 300

Query: 301 RLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWE 360
           RLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWE
Sbjct: 301 RLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWE 360

Query: 361 RGVVGGKMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQ 420
           RGVVGGKMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQ
Sbjct: 361 RGVVGGKMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQ 420

Query: 421 GGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREK 480
           GGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREK
Sbjct: 421 GGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREK 480

Query: 481 TLKVRGVDRTPYLGDVAVVVHPGKKEMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQI 540
           TLKVRGVDRTPYLGDVAVVVHPGKKEMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQI
Sbjct: 481 TLKVRGVDRTPYLGDVAVVVHPGKKEMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQI 540

Query: 541 DDHVPKRASARILAPPGGRSSGIW 564
           DDHVPKRASARILAPPGGRSSGIW
Sbjct: 541 DDHVPKRASARILAPPGGRSSGIW 564


>gi|4503375 dihydropyrimidinase [Homo sapiens]
          Length = 519

 Score =  606 bits (1562), Expect = e-173
 Identities = 297/509 (58%), Positives = 380/509 (74%), Gaps = 4/509 (0%)

Query: 5   SASVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGA----KVIDATGKLVIP 60
           +A  R+LI+GG+VVNDD +  ADV +E+G+++ +G +L+ PGGA    +V+DA GKLV+P
Sbjct: 2   AAPSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLP 61

Query: 61  GGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLA 120
           GGIDT TH    FM +  +DDF+ GTKAAL GGTTMII   +P K  SL++A+E  R  A
Sbjct: 62  GGIDTHTHMQFPFMGSRSIDDFHQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWA 121

Query: 121 DPKVCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHA 180
           DPKVCCDY+LHV +TWW+ +VK EM+ LV++KGVNSF+MFM YKDLYM+ D ELY+    
Sbjct: 122 DPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMFMAYKDLYMVTDLELYEAFSR 181

Query: 181 CKDIGAIARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTH 240
           CK+IGAIA+VHAENG+L+AEGAK+ L LGITGPEG E+ RPE +EAEAT R ITIA+  +
Sbjct: 182 CKEIGAIAQVHAENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVN 241

Query: 241 CPIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPL 300
           CP+Y+V+V S SA  VIA A+  GKVV  E   A     G HY++++W HAA +V  PPL
Sbjct: 242 CPLYIVHVMSKSAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPL 301

Query: 301 RLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWE 360
           R D +T  +LM+LLAND L    +D+  F T QKA+GK+DFTKIP+GV+GV+DRMSVIWE
Sbjct: 302 RPDPSTPDFLMNLLANDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWE 361

Query: 361 RGVVGGKMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQ 420
           +GV  GKMDENRFVAVTS+NAAK+ NLYPRKGRI  G+DAD+V+WDP+ T+TISA T  Q
Sbjct: 362 KGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPKGTRTISAKTHHQ 421

Query: 421 GGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREK 480
             +FN++E M CHGVPLVTISRG+VVYE GVF    G GKF P + F + +YK++ QR++
Sbjct: 422 AVNFNIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPRKPFAEYIYKRIKQRDR 481

Query: 481 TLKVRGVDRTPYLGDVAVVVHPGKKEMGT 509
           T     V+R PY G+VA +     KE  T
Sbjct: 482 TCTPTPVERAPYKGEVATLKSRVTKEDAT 510


>gi|62422571 collapsin response mediator protein 1 isoform 1 [Homo
           sapiens]
          Length = 686

 Score =  588 bits (1515), Expect = e-168
 Identities = 285/560 (50%), Positives = 397/560 (70%), Gaps = 5/560 (0%)

Query: 4   NSASVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGI 63
           N  S R+LIKGG+++NDD +  ADVY+E+G+I+Q+G  L++PGG K I+A G++VIPGGI
Sbjct: 125 NGQSDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGI 184

Query: 64  DTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLADPK 123
           D +T+  +     T  DDF+ GT+AALVGGTTMII HV+P+  +SL+ ++EK    AD K
Sbjct: 185 DVNTYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTK 244

Query: 124 VCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHACKD 183
            CCDY+LHV IT W   V+ E+E LV++KGVNSFQ++M YKD+Y + DS+LY+     K 
Sbjct: 245 SCCDYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQLYEAFTFLKG 304

Query: 184 IGAIARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPI 243
           +GA+  VHAENG+L+A+  K  L++GITGPEG  +SRPEELEAEA  R ITIA R +CP+
Sbjct: 305 LGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPV 364

Query: 244 YLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPLRLD 303
           Y+  V S SA D+IA A+ +G +V  E   A     G HY+ ++W+ AAA+VT PPL  D
Sbjct: 365 YITKVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPD 424

Query: 304 TNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWERGV 363
             T  YL SLLA   L +  S H P++T QKA+GK++FT IP GV+G+++RM+V+W++ V
Sbjct: 425 PTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAV 484

Query: 364 VGGKMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGD 423
             GKMDEN+FVAVTS+NAAK+ NLYPRKGRI  G+DADVV+WDP+  KTI+A +     +
Sbjct: 485 ATGKMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVE 544

Query: 424 FNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLK 483
           +N++E M CHG PLV IS+G++V+E+G     +G G+F P ++FP+ +Y+++  R K   
Sbjct: 545 YNIFEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFG 604

Query: 484 VRGVDRTPYLGDVAVVVHPGKKEMGTPLADTPTRPVTRH--GGMRDLHESSFSLSGSQID 541
           ++GV R  Y G V  V  P   +  TP     + P ++H    +R+LH+S+FSLSG+QID
Sbjct: 605 LQGVSRGMYDGPVYEV--PATPKYATPAPSAKSSP-SKHQPPPIRNLHQSNFSLSGAQID 661

Query: 542 DHVPKRASARILAPPGGRSS 561
           D+ P+R   RI+APPGGRS+
Sbjct: 662 DNNPRRTGHRIVAPPGGRSN 681


>gi|4503377 dihydropyrimidinase-like 2 [Homo sapiens]
          Length = 572

 Score =  587 bits (1513), Expect = e-167
 Identities = 289/556 (51%), Positives = 394/556 (70%), Gaps = 3/556 (0%)

Query: 7   SVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTS 66
           S R+LIKGGK+VNDD +  AD+Y+E+G+I+Q+G  L++PGG K I+A  ++VIPGGID  
Sbjct: 14  SDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVH 73

Query: 67  THFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLADPKVCC 126
           T F       T  DDF+ GTKAAL GGTTMII HV+P+  TSL+ A+++ R  AD K CC
Sbjct: 74  TRFQMPDQGMTSADDFFQGTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCC 133

Query: 127 DYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHACKDIGA 186
           DY+LHV I+ W   ++ EME LV++ GVNSF ++M +KD + L D ++Y+VL   +DIGA
Sbjct: 134 DYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIGA 193

Query: 187 IARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLV 246
           IA+VHAENG+++AE  +  LDLGITGPEG  +SRPEE+EAEA +R ITIAN+T+CP+Y+ 
Sbjct: 194 IAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYIT 253

Query: 247 NVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNT 306
            V S S+ +VIA A+ +G VV  E  TA     G HY+ ++W+ AAA+VT PPL  D  T
Sbjct: 254 KVMSKSSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTT 313

Query: 307 STYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWERGVVGG 366
             +L SLL+   L +  S H  F T QKA+GK++FT IP G +G ++RMSVIW++ VV G
Sbjct: 314 PDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTG 373

Query: 367 KMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGDFNL 426
           KMDEN+FVAVTS+NAAK+ NLYPRKGRI  G+DAD+V+WDP++ KTISA T     ++N+
Sbjct: 374 KMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDADLVIWDPDSVKTISAKTHNSSLEYNI 433

Query: 427 YENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLKVRG 486
           +E M C G PLV IS+G++V E+G     EG+G++ P + FPD VYK++  R +  ++RG
Sbjct: 434 FEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPFPDFVYKRIKARSRLAELRG 493

Query: 487 VDRTPYLGDVAVVVHPGKKEMGTPLADTPTRPVTRHG-GMRDLHESSFSLSGSQIDDHVP 545
           V R  Y G V  V    K    TP +   T P  +    +R+LH+S FSLSG+QIDD++P
Sbjct: 494 VPRGLYDGPVCEVSVTPKTV--TPASSAKTSPAKQQAPPVRNLHQSGFSLSGAQIDDNIP 551

Query: 546 KRASARILAPPGGRSS 561
           +R + RI+APPGGR++
Sbjct: 552 RRTTQRIVAPPGGRAN 567


>gi|4503051 collapsin response mediator protein 1 isoform 2 [Homo
           sapiens]
          Length = 572

 Score =  586 bits (1510), Expect = e-167
 Identities = 284/557 (50%), Positives = 396/557 (71%), Gaps = 5/557 (0%)

Query: 7   SVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTS 66
           S R+LIKGG+++NDD +  ADVY+E+G+I+Q+G  L++PGG K I+A G++VIPGGID +
Sbjct: 14  SDRLLIKGGRIINDDQSLYADVYLEDGLIKQIGENLIVPGGVKTIEANGRMVIPGGIDVN 73

Query: 67  THFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLADPKVCC 126
           T+  +     T  DDF+ GT+AALVGGTTMII HV+P+  +SL+ ++EK    AD K CC
Sbjct: 74  TYLQKPSQGMTAADDFFQGTRAALVGGTTMIIDHVVPEPGSSLLTSFEKWHEAADTKSCC 133

Query: 127 DYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHACKDIGA 186
           DY+LHV IT W   V+ E+E LV++KGVNSFQ++M YKD+Y + DS+LY+     K +GA
Sbjct: 134 DYSLHVDITSWYDGVREELEVLVQDKGVNSFQVYMAYKDVYQMSDSQLYEAFTFLKGLGA 193

Query: 187 IARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLV 246
           +  VHAENG+L+A+  K  L++GITGPEG  +SRPEELEAEA  R ITIA R +CP+Y+ 
Sbjct: 194 VILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYIT 253

Query: 247 NVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNT 306
            V S SA D+IA A+ +G +V  E   A     G HY+ ++W+ AAA+VT PPL  D  T
Sbjct: 254 KVMSKSAADIIALARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTT 313

Query: 307 STYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWERGVVGG 366
             YL SLLA   L +  S H P++T QKA+GK++FT IP GV+G+++RM+V+W++ V  G
Sbjct: 314 PDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATG 373

Query: 367 KMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGDFNL 426
           KMDEN+FVAVTS+NAAK+ NLYPRKGRI  G+DADVV+WDP+  KTI+A +     ++N+
Sbjct: 374 KMDENQFVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNI 433

Query: 427 YENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLKVRG 486
           +E M CHG PLV IS+G++V+E+G     +G G+F P ++FP+ +Y+++  R K   ++G
Sbjct: 434 FEGMECHGSPLVVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQG 493

Query: 487 VDRTPYLGDVAVVVHPGKKEMGTPLADTPTRPVTRH--GGMRDLHESSFSLSGSQIDDHV 544
           V R  Y G V  V  P   +  TP     + P ++H    +R+LH+S+FSLSG+QIDD+ 
Sbjct: 494 VSRGMYDGPVYEV--PATPKYATPAPSAKSSP-SKHQPPPIRNLHQSNFSLSGAQIDDNN 550

Query: 545 PKRASARILAPPGGRSS 561
           P+R   RI+APPGGRS+
Sbjct: 551 PRRTGHRIVAPPGGRSN 567


>gi|4503379 dihydropyrimidinase-like 3 [Homo sapiens]
          Length = 570

 Score =  581 bits (1498), Expect = e-166
 Identities = 285/555 (51%), Positives = 388/555 (69%), Gaps = 3/555 (0%)

Query: 7   SVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTS 66
           S R+LIKGG++VNDD +  AD+Y+E+G+I+Q+G  L++PGG K I+A GK+VIPGGID  
Sbjct: 14  SDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVH 73

Query: 67  THFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLADPKVCC 126
           THF   +   T VDDF+ GTKAAL GGTTMII HV+P+ E+SL +AYEK R  AD K CC
Sbjct: 74  THFQMPYKGMTTVDDFFQGTKAALAGGTTMIIDHVVPEPESSLTEAYEKWREWADGKSCC 133

Query: 127 DYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHACKDIGA 186
           DYALHV IT W   VK E++ L+++KGVNSF ++M YKDLY + ++ELY++     ++GA
Sbjct: 134 DYALHVDITHWNDSVKQEVQNLIKDKGVNSFMVYMAYKDLYQVSNTELYEIFTCLGELGA 193

Query: 187 IARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLV 246
           IA+VHAENG+++A+     L++GITGPEG  +SRPEELEAEA  R ITIA++T+CP+Y+ 
Sbjct: 194 IAQVHAENGDIIAQEQTRMLEMGITGPEGHVLSRPEELEAEAVFRAITIASQTNCPLYVT 253

Query: 247 NVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNT 306
            V S SA D+I+ A+ +G VV  E  TA   + G HY+ ++W+ AAA+VT PPL  D  T
Sbjct: 254 KVMSKSAADLISQARKKGNVVFGEPITASLGIDGTHYWSKNWAKAAAFVTSPPLSPDPTT 313

Query: 307 STYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWERGVVGG 366
             Y+ SLLA+  L +  S H  F+T QKA+GK++FT IP G +GV++RMSVIW++ V  G
Sbjct: 314 PDYINSLLASGDLQLSGSAHCTFSTAQKAIGKDNFTAIPEGTNGVEERMSVIWDKAVATG 373

Query: 367 KMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGDFNL 426
           KMDEN+FVAVTS+NAAK+ NLYPRKGRI  G+D+D+V+WDP+A K +SA       ++N+
Sbjct: 374 KMDENQFVAVTSTNAAKIFNLYPRKGRISVGSDSDLVIWDPDAVKIVSAKNHQSAAEYNI 433

Query: 427 YENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLKVRG 486
           +E M   G PLV I +G+++ E+G     +G G+F P   F D VYK++  R K   +  
Sbjct: 434 FEGMELRGAPLVVICQGKIMLEDGNLHVTQGAGRFIPCSPFSDYVYKRIKARRKMADLHA 493

Query: 487 VDRTPYLGDVAVVVHPGKKEMGTPLADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVPK 546
           V R  Y G V  +    K   GTP       P   +  +R+LH+S FSLSG+Q+D+ V +
Sbjct: 494 VPRGMYDGPVFDLTTTPKG--GTPAGSARGSPTRPNPPVRNLHQSGFSLSGTQVDEGV-R 550

Query: 547 RASARILAPPGGRSS 561
            AS RI+APPGGRS+
Sbjct: 551 SASKRIVAPPGGRSN 565


>gi|190194363 dihydropyrimidinase-like 4 [Homo sapiens]
          Length = 572

 Score =  567 bits (1461), Expect = e-161
 Identities = 277/556 (49%), Positives = 377/556 (67%), Gaps = 3/556 (0%)

Query: 7   SVRILIKGGKVVNDDCTHEADVYIENGIIQQVGRELMIPGGAKVIDATGKLVIPGGIDTS 66
           S R+LI+GG++VNDD +  ADV++E+G+I+Q+G  L++PGG K IDA G +V+PGG+D  
Sbjct: 14  SDRLLIRGGRIVNDDQSFYADVHVEDGLIKQIGENLIVPGGIKTIDAHGLMVLPGGVDVH 73

Query: 67  THFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVDAYEKCRGLADPKVCC 126
           T      +  T  DDF  GTKAAL GGTTMI+ HV PD   SL+ AYE+ R  AD   CC
Sbjct: 74  TRLQMPVLGMTPADDFCQGTKAALAGGTTMILDHVFPDTGVSLLAAYEQWRERADSAACC 133

Query: 127 DYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDSELYQVLHACKDIGA 186
           DY+LHV IT W   +K E+E LV+EKGVNSF +FM YKD     DS++Y++    +D+GA
Sbjct: 134 DYSLHVDITRWHESIKEELEALVKEKGVNSFLVFMAYKDRCQCSDSQMYEIFSIIRDLGA 193

Query: 187 IARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRVITIANRTHCPIYLV 246
           +A+VHAENG++V E  K  L+LGITGPEG  +S PEE+EAEA +R +TIA + +CP+Y+ 
Sbjct: 194 LAQVHAENGDIVEEEQKRLLELGITGPEGHVLSHPEEVEAEAVYRAVTIAKQANCPLYVT 253

Query: 247 NVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNT 306
            V S  A D IA AK +G VV  E  TA     G HY+ ++W+ AAA+VT PP+  D  T
Sbjct: 254 KVMSKGAADAIAQAKRRGVVVFGEPITASLGTDGSHYWSKNWAKAAAFVTSPPVNPDPTT 313

Query: 307 STYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWERGVVGG 366
           + +L  LL++  L +  S H  FTT QKA+GK++F  IP G +G+++RMS++WE+ V  G
Sbjct: 314 ADHLTCLLSSGDLQVTGSAHCTFTTAQKAVGKDNFALIPEGTNGIEERMSMVWEKCVASG 373

Query: 367 KMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATKTISASTQVQGGDFNL 426
           KMDEN FVAVTS+NAAK+ N YPRKGR+  G+DAD+V+W+P+ATK ISA T     ++N+
Sbjct: 374 KMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSDADLVIWNPKATKIISAKTHNLNVEYNI 433

Query: 427 YENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLKVRG 486
           +E + C G P V IS+GRV  E+G      G G+F P ++FPD VYK++  R +  ++ G
Sbjct: 434 FEGVECRGAPAVVISQGRVALEDGKMFVTPGAGRFVPRKTFPDFVYKRIKARNRLAEIHG 493

Query: 487 VDRTPYLGDVAVVVHPGKKEMGTPL-ADTPTRPVTRHGGMRDLHESSFSLSGSQIDDHVP 545
           V R  Y G V  V+ P K   G P  A  P +       +R+LH+S FSLSGSQ DDH+ 
Sbjct: 494 VPRGLYDGPVHEVMVPAKPGSGAPARASCPGK--ISVPPVRNLHQSGFSLSGSQADDHIA 551

Query: 546 KRASARILAPPGGRSS 561
           +R + +I+APPGGRS+
Sbjct: 552 RRTAQKIMAPPGGRSN 567


>gi|18105007 carbamoylphosphate synthetase 2/aspartate
            transcarbamylase/dihydroorotase [Homo sapiens]
          Length = 2225

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 93/424 (21%), Positives = 162/424 (38%), Gaps = 67/424 (15%)

Query: 56   KLV-IPGGIDTSTHFHQTFMNATCVDDFYHGTKAALVGGTTMIIGHVLPDKETSLVD--A 112
            KLV +PG ID   H  +     T  +DF  GT AAL GG TM+    +P+    ++D  A
Sbjct: 1460 KLVRLPGLIDVHVHLREP--GGTHKEDFASGTAAALAGGITMVC--AMPNTRPPIIDAPA 1515

Query: 113  YEKCRGLADPKVCCDYALHVGITWWAPKVKAEMETLVREKGVNSFQMFMTYKDLYMLRDS 172
                + LA+    CD+AL +G    + +    + T+          +  T+ +L +  DS
Sbjct: 1516 LALAQKLAEAGARCDFALFLGA---SSENAGTLGTVAGSAAGLKLYLNETFSELRL--DS 1570

Query: 173  ELYQVLHACKDIGAIARVHAENGELVAEGAKEALDLGITGPEGIEISRPEELEAEATHRV 232
             +  + H                               T P  + I    E +  A   V
Sbjct: 1571 VVQWMEHF-----------------------------ETWPSHLPIVAHAEQQTVAA--V 1599

Query: 233  ITIANRTHCPIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAA 292
            + +A  T   +++ +V+      +I AAK +G  V  E    H  L+     H D     
Sbjct: 1600 LMVAQLTQRSVHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLS-----HDDLERLG 1654

Query: 293  AYVTVPPLRLDTNTSTYLMSLLAN-DTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGV 351
                   +R +  +   + +L  N   ++  ASDH P T ++K   +      P G  G+
Sbjct: 1655 P--GKGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRP-----PPGFPGL 1707

Query: 352  QDRMSVIWERGVVGGKMDENRFVAVTSSNAAKLLNLYPRKGRIIPGADADVVVWDPEATK 411
            +  + ++    V  G++  +  +     N  ++ +L P++       D  V V D E   
Sbjct: 1708 ETMLPLLL-TAVSEGRLSLDDLLQRLHHNPRRIFHLPPQE-------DTYVEV-DLEHEW 1758

Query: 412  TISASTQVQGGDFNLYENMRCHGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTV 471
            TI +        +  +E  +  G     + RG V Y +G  +   G G+   +R +P   
Sbjct: 1759 TIPSHMPFSKAHWTPFEGQKVKGTVRRVVLRGEVAYIDGQVLVPPGYGQ--DVRKWPQGA 1816

Query: 472  YKKL 475
              +L
Sbjct: 1817 VPQL 1820


>gi|10863929 ribonuclease L [Homo sapiens]
          Length = 741

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 4/128 (3%)

Query: 171 DSELYQVLHACKDIGAIARVHAENGELVAEGAKEALDLGIT----GPEGIEISRPEELEA 226
           DS++  + H   D GA   V  E G+     A E   LG+       E IEI+  +    
Sbjct: 215 DSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK 274

Query: 227 EATHRVITIANRTHCPIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQ 286
            A    + +  +    +     +S   GD++  A+      L +   +H      H   +
Sbjct: 275 TALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVKVLLSHGAKEDFHPPAE 334

Query: 287 DWSHAAAY 294
           DW   +++
Sbjct: 335 DWKPQSSH 342


>gi|149363672 sarcalumenin [Homo sapiens]
          Length = 473

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 10/81 (12%)

Query: 433 HGVPLVTISRGRVVYENGVFMCAEGTGKFCPLRSFPDTVYKKLVQREKTLKVRGVDRTPY 492
           HG  L TI         G+ M A+    F PL  F     +KL+  E   K+  ++R  +
Sbjct: 139 HGPKLKTIE--------GIVMAADSARSFSPLEKFGQNFLEKLIGIEVPHKL--LERVTF 188

Query: 493 LGDVAVVVHPGKKEMGTPLAD 513
           +    ++ +  ++E G P  D
Sbjct: 189 VDTPGIIENRKQQERGYPFND 209


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,290,416
Number of Sequences: 37866
Number of extensions: 926949
Number of successful extensions: 1880
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1864
Number of HSP's gapped (non-prelim): 11
length of query: 564
length of database: 18,247,518
effective HSP length: 108
effective length of query: 456
effective length of database: 14,157,990
effective search space: 6456043440
effective search space used: 6456043440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.