Search of human proteins with 193290174

Search of human proteins with 193290174

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|193290174 hypothetical protein LOC642987 [Homo sapiens]
         (506 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|193290174 hypothetical protein LOC642987 [Homo sapiens]           1031   0.0  
gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]            32   1.4  
gi|4503841 ATP-dependent DNA helicase II, 70 kDa subunit [Homo s...    32   1.8  
gi|15826840 PTK7 protein tyrosine kinase 7 isoform a precursor [...    31   2.3  
gi|22902130 PTK7 protein tyrosine kinase 7 isoform d precursor [...    31   2.3  
gi|22902128 PTK7 protein tyrosine kinase 7 isoform c precursor [...    31   2.3  
gi|22902126 PTK7 protein tyrosine kinase 7 isoform b precursor [...    31   2.3  
gi|154800457 centrosomal protein 68kDa [Homo sapiens]                  30   4.0  

>gi|193290174 hypothetical protein LOC642987 [Homo sapiens]
          Length = 506

 Score = 1031 bits (2666), Expect = 0.0
 Identities = 506/506 (100%), Positives = 506/506 (100%)

Query: 1   MNMPVNKSPMINTCGGISSPYHEELWKLNFQHLSGERGHKSRPTFSITKEFILRFNQTQN 60
           MNMPVNKSPMINTCGGISSPYHEELWKLNFQHLSGERGHKSRPTFSITKEFILRFNQTQN
Sbjct: 1   MNMPVNKSPMINTCGGISSPYHEELWKLNFQHLSGERGHKSRPTFSITKEFILRFNQTQN 60

Query: 61  SKEKEELLELARKIILRCKRKLGLKTLGSGRHVHLPAAWTEVIYLAQCKGEIQDESLNML 120
           SKEKEELLELARKIILRCKRKLGLKTLGSGRHVHLPAAWTEVIYLAQCKGEIQDESLNML
Sbjct: 61  SKEKEELLELARKIILRCKRKLGLKTLGSGRHVHLPAAWTEVIYLAQCKGEIQDESLNML 120

Query: 121 YASLDHASFDYDHLPALFFVAESVLYRLCCDASLKTYLYSVEIKLAKIGYLVFLRLFIFF 180
           YASLDHASFDYDHLPALFFVAESVLYRLCCDASLKTYLYSVEIKLAKIGYLVFLRLFIFF
Sbjct: 121 YASLDHASFDYDHLPALFFVAESVLYRLCCDASLKTYLYSVEIKLAKIGYLVFLRLFIFF 180

Query: 181 LHGHLESFKQHLLRLQPYLYALSFSGASYHKYPNIFSNVQFILKASEIIGKRELRSESIF 240
           LHGHLESFKQHLLRLQPYLYALSFSGASYHKYPNIFSNVQFILKASEIIGKRELRSESIF
Sbjct: 181 LHGHLESFKQHLLRLQPYLYALSFSGASYHKYPNIFSNVQFILKASEIIGKRELRSESIF 240

Query: 241 RPVEDKKRYENTDSDMGGYEINHLLWHCVAAWSCVQNNSPQLNNVLEHLVFHKTQLQKKC 300
           RPVEDKKRYENTDSDMGGYEINHLLWHCVAAWSCVQNNSPQLNNVLEHLVFHKTQLQKKC
Sbjct: 241 RPVEDKKRYENTDSDMGGYEINHLLWHCVAAWSCVQNNSPQLNNVLEHLVFHKTQLQKKC 300

Query: 301 WLDSVLALLVLGEAAKLNMACLKALMDVVRDFVSSIMSVQNQEESCKVDDFSWAWNVVYI 360
           WLDSVLALLVLGEAAKLNMACLKALMDVVRDFVSSIMSVQNQEESCKVDDFSWAWNVVYI
Sbjct: 301 WLDSVLALLVLGEAAKLNMACLKALMDVVRDFVSSIMSVQNQEESCKVDDFSWAWNVVYI 360

Query: 361 YTVILAEICLYAATSDLRKTALIGFCHCKSSQKNILYLDKSVPPELKETSILSLLEYFSS 420
           YTVILAEICLYAATSDLRKTALIGFCHCKSSQKNILYLDKSVPPELKETSILSLLEYFSS
Sbjct: 361 YTVILAEICLYAATSDLRKTALIGFCHCKSSQKNILYLDKSVPPELKETSILSLLEYFSS 420

Query: 421 KMSENCDQVVWTGYYGLVYNLVKISWELQGDEEQDGLRNMIWQTLQKTKDYEEDVRIQNA 480
           KMSENCDQVVWTGYYGLVYNLVKISWELQGDEEQDGLRNMIWQTLQKTKDYEEDVRIQNA
Sbjct: 421 KMSENCDQVVWTGYYGLVYNLVKISWELQGDEEQDGLRNMIWQTLQKTKDYEEDVRIQNA 480

Query: 481 INIAQGTSFCIRNSHVSISRFLHQGR 506
           INIAQGTSFCIRNSHVSISRFLHQGR
Sbjct: 481 INIAQGTSFCIRNSHVSISRFLHQGR 506


>gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]
          Length = 4265

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 300  CWLDSVLALLVLGEAAKLNMACLKALMDVVRDFVSSIMSVQNQEESCKVDDFSWAWNVVY 359
            C   S L  LV G+ +++  A L AL+ V+      ++S   QE    V+DF W   + Y
Sbjct: 1467 CQQLSDLVALVRGKLSRMQRAVLSALI-VIEVHAKDVVSKLIQENVVSVNDFQWISQLRY 1525

Query: 360  IYT 362
             +T
Sbjct: 1526 YWT 1528


>gi|4503841 ATP-dependent DNA helicase II, 70 kDa subunit [Homo
           sapiens]
          Length = 609

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 199 LYALSFSGASYHKYPNIFSNVQFILKASEIIGKRELRSESIFRPVEDKKRYENTDSDMGG 258
           L A+ F G    K    F N+ ++L+  +  G + +     F+  + +KR+++       
Sbjct: 82  LLAVVFYGTEKDKNSVNFKNI-YVLQELDNPGAKRILELDQFKGQQGQKRFQDMMGHGSD 140

Query: 259 YEINHLLWHCVAAWSCVQ 276
           Y ++ +LW C   +S VQ
Sbjct: 141 YSLSEVLWVCANLFSDVQ 158


>gi|15826840 PTK7 protein tyrosine kinase 7 isoform a precursor
           [Homo sapiens]
          Length = 1070

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 49  KEFILRFNQTQNSKEKEELLELARKIILRCKRKLGLKTLGSGRHVHLPAAWTEVIYLAQC 108
           K+F LR +++++ K K + L   +K+ L  +  LG++ L + R VH   A    +  AQ 
Sbjct: 884 KQF-LRISKSKDEKLKSQPLSTKQKVALCTQVALGMEHLSNNRFVHKDLAARNCLVSAQR 942

Query: 109 KGEIQDESLNMLYASLDHASFDYDHLPALFFVAESVL 145
           + ++    L+    + ++  F    +P  +   E++L
Sbjct: 943 QVKVSALGLSKDVYNSEYYHFRQAWVPLRWMSPEAIL 979


>gi|22902130 PTK7 protein tyrosine kinase 7 isoform d precursor
           [Homo sapiens]
          Length = 1014

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 49  KEFILRFNQTQNSKEKEELLELARKIILRCKRKLGLKTLGSGRHVHLPAAWTEVIYLAQC 108
           K+F LR +++++ K K + L   +K+ L  +  LG++ L + R VH   A    +  AQ 
Sbjct: 828 KQF-LRISKSKDEKLKSQPLSTKQKVALCTQVALGMEHLSNNRFVHKDLAARNCLVSAQR 886

Query: 109 KGEIQDESLNMLYASLDHASFDYDHLPALFFVAESVL 145
           + ++    L+    + ++  F    +P  +   E++L
Sbjct: 887 QVKVSALGLSKDVYNSEYYHFRQAWVPLRWMSPEAIL 923


>gi|22902128 PTK7 protein tyrosine kinase 7 isoform c precursor
           [Homo sapiens]
          Length = 940

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 49  KEFILRFNQTQNSKEKEELLELARKIILRCKRKLGLKTLGSGRHVHLPAAWTEVIYLAQC 108
           K+F LR +++++ K K + L   +K+ L  +  LG++ L + R VH   A    +  AQ 
Sbjct: 754 KQF-LRISKSKDEKLKSQPLSTKQKVALCTQVALGMEHLSNNRFVHKDLAARNCLVSAQR 812

Query: 109 KGEIQDESLNMLYASLDHASFDYDHLPALFFVAESVL 145
           + ++    L+    + ++  F    +P  +   E++L
Sbjct: 813 QVKVSALGLSKDVYNSEYYHFRQAWVPLRWMSPEAIL 849


>gi|22902126 PTK7 protein tyrosine kinase 7 isoform b precursor
           [Homo sapiens]
          Length = 1030

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 49  KEFILRFNQTQNSKEKEELLELARKIILRCKRKLGLKTLGSGRHVHLPAAWTEVIYLAQC 108
           K+F LR +++++ K K + L   +K+ L  +  LG++ L + R VH   A    +  AQ 
Sbjct: 844 KQF-LRISKSKDEKLKSQPLSTKQKVALCTQVALGMEHLSNNRFVHKDLAARNCLVSAQR 902

Query: 109 KGEIQDESLNMLYASLDHASFDYDHLPALFFVAESVL 145
           + ++    L+    + ++  F    +P  +   E++L
Sbjct: 903 QVKVSALGLSKDVYNSEYYHFRQAWVPLRWMSPEAIL 939


>gi|154800457 centrosomal protein 68kDa [Homo sapiens]
          Length = 757

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 19/89 (21%)

Query: 257 GGYEINHLLWHCVAAWSCVQNNSPQLNNVLEHLVFHKTQLQKKCWLDSVLALLVLGEAAK 316
           GG +    L  CV  + C           LE L+         CWL +V  +   G AA+
Sbjct: 615 GGEQGKESLVQCVKTFCCQ----------LEELI---------CWLYNVADVTDHGTAAR 655

Query: 317 LNMACLKALMDVVRDFVSSIMSVQNQEES 345
            N+  LK+ + + R F   I   Q+  ES
Sbjct: 656 SNLTSLKSSLQLYRQFKKDIDEHQSLTES 684


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,614,487
Number of Sequences: 37866
Number of extensions: 784983
Number of successful extensions: 1806
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1800
Number of HSP's gapped (non-prelim): 8
length of query: 506
length of database: 18,247,518
effective HSP length: 107
effective length of query: 399
effective length of database: 14,195,856
effective search space: 5664146544
effective search space used: 5664146544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.