Search of human proteins with 187936953

Search of human proteins with 187936953

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|187936953 HHIP-like protein 1 isoform b [Homo sapiens]
         (608 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|187936953 HHIP-like protein 1 isoform b [Homo sapiens]            1289   0.0  
gi|187936955 HHIP-like protein 1 isoform a [Homo sapiens]            1222   0.0  
gi|124248546 HHIP-like 2 [Homo sapiens]                               760   0.0  
gi|20143973 hedgehog-interacting protein [Homo sapiens]               247   3e-65
gi|40288197 GATA binding protein 6 [Homo sapiens]                      31   2.9  
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]         31   2.9  
gi|20665034 tenascin XB isoform 2 [Homo sapiens]                       30   4.9  
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]            30   4.9  
gi|23111005 microfibrillar-associated protein 4 [Homo sapiens]         30   8.4  

>gi|187936953 HHIP-like protein 1 isoform b [Homo sapiens]
          Length = 608

 Score = 1289 bits (3335), Expect = 0.0
 Identities = 608/608 (100%), Positives = 608/608 (100%)

Query: 1   MARARAGALLALWVLGAAAHPQCLDFRPPFRPTQPLRLCAQYSDFGCCDEGRDAELTRRF 60
           MARARAGALLALWVLGAAAHPQCLDFRPPFRPTQPLRLCAQYSDFGCCDEGRDAELTRRF
Sbjct: 1   MARARAGALLALWVLGAAAHPQCLDFRPPFRPTQPLRLCAQYSDFGCCDEGRDAELTRRF 60

Query: 61  WALASRVDAAEWAACAGYARDLLCQECSPYAAHLYDAEDPFTPLRTVPGLCQDYCLDMWH 120
           WALASRVDAAEWAACAGYARDLLCQECSPYAAHLYDAEDPFTPLRTVPGLCQDYCLDMWH
Sbjct: 61  WALASRVDAAEWAACAGYARDLLCQECSPYAAHLYDAEDPFTPLRTVPGLCQDYCLDMWH 120

Query: 121 KCRGLFRHLSTDQELWALEGNLARFCRYLSLDDTDYCFPYLLVNKNLNSNLGHVVADAKG 180
           KCRGLFRHLSTDQELWALEGNLARFCRYLSLDDTDYCFPYLLVNKNLNSNLGHVVADAKG
Sbjct: 121 KCRGLFRHLSTDQELWALEGNLARFCRYLSLDDTDYCFPYLLVNKNLNSNLGHVVADAKG 180

Query: 181 CLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQVGLVWAYLPDRSRLGKPFLNISRVVL 240
           CLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQVGLVWAYLPDRSRLGKPFLNISRVVL
Sbjct: 181 CLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQVGLVWAYLPDRSRLGKPFLNISRVVL 240

Query: 241 TSPWEGDERGFLGIAFHPSFQHNRRLYVYYSVGIRSSEWIRISEFRVSEDDENAVDHSSE 300
           TSPWEGDERGFLGIAFHPSFQHNRRLYVYYSVGIRSSEWIRISEFRVSEDDENAVDHSSE
Sbjct: 241 TSPWEGDERGFLGIAFHPSFQHNRRLYVYYSVGIRSSEWIRISEFRVSEDDENAVDHSSE 300

Query: 301 RIILEVKEPASNHNGGQLLFGDDGYLYIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRID 360
           RIILEVKEPASNHNGGQLLFGDDGYLYIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRID
Sbjct: 301 RIILEVKEPASNHNGGQLLFGDDGYLYIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRID 360

Query: 361 VDRKERGLPYGIPPDNPFVGDPAAQPEVYALGVRNMWRCSFDRGDPSSGTGRGRLFCGDV 420
           VDRKERGLPYGIPPDNPFVGDPAAQPEVYALGVRNMWRCSFDRGDPSSGTGRGRLFCGDV
Sbjct: 361 VDRKERGLPYGIPPDNPFVGDPAAQPEVYALGVRNMWRCSFDRGDPSSGTGRGRLFCGDV 420

Query: 421 GQNKFEEVDVVERGGNYGWRAREGFECYDRSLCANTSLNDLLPIFAYPHTVGKSVTGGYV 480
           GQNKFEEVDVVERGGNYGWRAREGFECYDRSLCANTSLNDLLPIFAYPHTVGKSVTGGYV
Sbjct: 421 GQNKFEEVDVVERGGNYGWRAREGFECYDRSLCANTSLNDLLPIFAYPHTVGKSVTGGYV 480

Query: 481 YRGCEYPNLNGLYIFGDFMSGRLMSLQENPGTGQWQYSEICMGHGQTCEFPGLINNYYPY 540
           YRGCEYPNLNGLYIFGDFMSGRLMSLQENPGTGQWQYSEICMGHGQTCEFPGLINNYYPY
Sbjct: 481 YRGCEYPNLNGLYIFGDFMSGRLMSLQENPGTGQWQYSEICMGHGQTCEFPGLINNYYPY 540

Query: 541 IISFGEDEAGELYFMSTGEPSATAPRGVVYKIIDASSCKARSAMPGYVPAPSVCSSLTSQ 600
           IISFGEDEAGELYFMSTGEPSATAPRGVVYKIIDASSCKARSAMPGYVPAPSVCSSLTSQ
Sbjct: 541 IISFGEDEAGELYFMSTGEPSATAPRGVVYKIIDASSCKARSAMPGYVPAPSVCSSLTSQ 600

Query: 601 PFILQWWK 608
           PFILQWWK
Sbjct: 601 PFILQWWK 608


>gi|187936955 HHIP-like protein 1 isoform a [Homo sapiens]
          Length = 782

 Score = 1222 bits (3161), Expect = 0.0
 Identities = 580/586 (98%), Positives = 580/586 (98%), Gaps = 4/586 (0%)

Query: 1   MARARAGALLALWVLGAAAHPQCLDFRPPFRPTQPLRLCAQYSDFGCCDEGRDAELTRRF 60
           MARARAGALLALWVLGAAAHPQCLDFRPPFRPTQPLRLCAQYSDFGCCDEGRDAELTRRF
Sbjct: 1   MARARAGALLALWVLGAAAHPQCLDFRPPFRPTQPLRLCAQYSDFGCCDEGRDAELTRRF 60

Query: 61  WALASRVDAAEWAACAGYARDLLCQECSPYAAHLYDAEDPFTPLRTVPGLCQDYCLDMWH 120
           WALASRVDAAEWAACAGYARDLLCQECSPYAAHLYDAEDPFTPLRTVPGLCQDYCLDMWH
Sbjct: 61  WALASRVDAAEWAACAGYARDLLCQECSPYAAHLYDAEDPFTPLRTVPGLCQDYCLDMWH 120

Query: 121 KCRGLFRHLSTDQELWALEGNLARFCRYLSLDDTDYCFPYLLVNKNLNSNLGHVVADAKG 180
           KCRGLFRHLSTDQELWALEGNLARFCRYLSLDDTDYCFPYLLVNKNLNSNLGHVVADAKG
Sbjct: 121 KCRGLFRHLSTDQELWALEGNLARFCRYLSLDDTDYCFPYLLVNKNLNSNLGHVVADAKG 180

Query: 181 CLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQVGLVWAYLPDRSRLGKPFLNISRVVL 240
           CLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQVGLVWAYLPDRSRLGKPFLNISRVVL
Sbjct: 181 CLQLCLEEVANGLRNPVAMVHARDGTHRFFVAEQVGLVWAYLPDRSRLGKPFLNISRVVL 240

Query: 241 TSPWEGDERGFLGIAFHPSFQHNRRLYVYYSVGIRSSEWIRISEFRVSEDDENAVDHSSE 300
           TSPWEGDERGFLGIAFHPSFQHNRRLYVYYSVGIRSSEWIRISEFRVSEDDENAVDHSSE
Sbjct: 241 TSPWEGDERGFLGIAFHPSFQHNRRLYVYYSVGIRSSEWIRISEFRVSEDDENAVDHSSE 300

Query: 301 RIILEVKEPASNHNGGQLLFGDDGYLYIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRID 360
           RIILEVKEPASNHNGGQLLFGDDGYLYIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRID
Sbjct: 301 RIILEVKEPASNHNGGQLLFGDDGYLYIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRID 360

Query: 361 VDRKERGLPYGIPPDNPFVGDPAAQPEVYALGVRNMWRCSFDRGDPSSGTGRGRLFCGDV 420
           VDRKERGLPYGIPPDNPFVGDPAAQPEVYALGVRNMWRCSFDRGDPSSGTGRGRLFCGDV
Sbjct: 361 VDRKERGLPYGIPPDNPFVGDPAAQPEVYALGVRNMWRCSFDRGDPSSGTGRGRLFCGDV 420

Query: 421 GQNKFEEVDVVERGGNYGWRAREGFECYDRSLCANTSLNDLLPIFAYPHTVGKSVTGGYV 480
           GQNKFEEVDVVERGGNYGWRAREGFECYDRSLCANTSLNDLLPIFAYPHTVGKSVTGGYV
Sbjct: 421 GQNKFEEVDVVERGGNYGWRAREGFECYDRSLCANTSLNDLLPIFAYPHTVGKSVTGGYV 480

Query: 481 YRGCEYPNLNGLYIFGDFMSGRLMSLQENPGTGQWQYSEICMGHGQTCEFPGLINNYYPY 540
           YRGCEYPNLNGLYIFGDFMSGRLMSLQENPGTGQWQYSEICMGHGQTCEFPGLINNYYPY
Sbjct: 481 YRGCEYPNLNGLYIFGDFMSGRLMSLQENPGTGQWQYSEICMGHGQTCEFPGLINNYYPY 540

Query: 541 IISFGEDEAGELYFMSTGEPSATAPRGVVYKIIDASSCKARSAMPG 586
           IISFGEDEAGELYFMSTGEPSATAPRGVVYKIIDAS    R A PG
Sbjct: 541 IISFGEDEAGELYFMSTGEPSATAPRGVVYKIIDAS----RRAPPG 582


>gi|124248546 HHIP-like 2 [Homo sapiens]
          Length = 724

 Score =  760 bits (1963), Expect = 0.0
 Identities = 359/578 (62%), Positives = 428/578 (74%), Gaps = 10/578 (1%)

Query: 20  HPQCLDFRPPFRPTQPLRLCAQYSDFGCCDEGRDAELTRRFWALASRVDAAEWAACAGYA 79
           HPQCLD+ PPF+P   L  C+ Y  FGCCD+ +D  +  R+W +    D      C  Y 
Sbjct: 42  HPQCLDYGPPFQPPLHLEFCSDYESFGCCDQHKDRRIAARYWDIMEYFDLKRHELCGDYI 101

Query: 80  RDLLCQECSPYAAHLYDAEDPFTPLRTVPGLCQDYCLDMWHKCRGLFRHLSTDQELWALE 139
           +D+LCQECSPYAAHLYDAE+  TPLR +PGLC DYC      C      L+ D+ L    
Sbjct: 102 KDILCQECSPYAAHLYDAENTQTPLRNLPGLCSDYCSAFHSNCHSAISLLTNDRGLQESH 161

Query: 140 G-NLARFCRYLSLDDTDYCFPYLLVNKNLNSNLGHVVADAKGCLQLCLEEVANGLRNPVA 198
           G +  RFC  L L D DYCFP +L N  LN +LG V  D +GCLQLCL EVANGLRNPV+
Sbjct: 162 GRDGTRFCHLLDLPDKDYCFPNVLRNDYLNRHLGMVAQDPQGCLQLCLSEVANGLRNPVS 221

Query: 199 MVHARDGTHRFFVAEQVGLVWAYLPDRSRLGKPFLNISRVVLTSPWEGDERGFLGIAFHP 258
           MVHA DGTHRFFVAEQVG+VW YLPD SRL +PFL++  +VLT+PW GDERGFLG+AFHP
Sbjct: 222 MVHAGDGTHRFFVAEQVGVVWVYLPDGSRLEQPFLDLKNIVLTTPWIGDERGFLGLAFHP 281

Query: 259 SFQHNRRLYVYYS-VGIRSSEWIRISEFRVSEDDENAVDHSSERIILEVKEPASNHNGGQ 317
            F+HNR+ Y+YYS +  +  E IRISE +VS  D N  D  SER+ILE++EPASNHNGGQ
Sbjct: 282 KFRHNRKFYIYYSCLDKKKVEKIRISEMKVSRADPNKADLKSERVILEIEEPASNHNGGQ 341

Query: 318 LLFGDDGYLYIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRIDVDRK-ERGLPYGIPPDN 376
           LLFG DGY+YIFTGDGG AGDPFG FGNAQNKS+LLGKVLRIDV+R    G  Y +P DN
Sbjct: 342 LLFGLDGYMYIFTGDGGQAGDPFGLFGNAQNKSSLLGKVLRIDVNRAGSHGKRYRVPSDN 401

Query: 377 PFVGDPAAQPEVYALGVRNMWRCSFDRGDPSSGTGRGRLFCGDVGQNKFEEVDVVERGGN 436
           PFV +P A P +YA G+RNMWRC+ DRGDP +  GRGR+FCGDVGQN+FEEVD++ +GGN
Sbjct: 402 PFVSEPGAHPAIYAYGIRNMWRCAVDRGDPITRQGRGRIFCGDVGQNRFEEVDLILKGGN 461

Query: 437 YGWRAREGFECYDRSLCANTSLNDLLPIFAYPHTVGKSVTGGYVYRGCEYPNLNGLYIFG 496
           YGWRA+EGF CYD+ LC N SL+D+LPI+AY H VGKSVTGGYVYRGCE PNLNGLYIFG
Sbjct: 462 YGWRAKEGFACYDKKLCHNASLDDVLPIYAYGHAVGKSVTGGYVYRGCESPNLNGLYIFG 521

Query: 497 DFMSGRLMSLQENPGTGQWQYSEICMGHGQTCEFPGLINNYYPYIISFGEDEAGELYFMS 556
           DFMSGRLM+LQE+    +W+  ++C+G   +C FPGLI+ +  +IISF EDEAGELYF++
Sbjct: 522 DFMSGRLMALQEDRKNKKWKKQDLCLGSTTSCAFPGLISTHSKFIISFAEDEAGELYFLA 581

Query: 557 TGEPSATAPRGVVYKIIDASSCKARSAMPG---YVPAP 591
           T  PSA APRG +YK +D S    R A PG   Y P P
Sbjct: 582 TSYPSAYAPRGSIYKFVDPS----RRAPPGKCKYKPVP 615


>gi|20143973 hedgehog-interacting protein [Homo sapiens]
          Length = 700

 Score =  247 bits (630), Expect = 3e-65
 Identities = 172/557 (30%), Positives = 262/557 (47%), Gaps = 69/557 (12%)

Query: 42  YSDFGCCDEGRDAELTRRFWALASRVDAAEWAACAGYARDLLCQECSPYAAHLYDAEDPF 101
           Y    CC       L R    + S  +  E   C     ++ C  CSP++  L+ + +  
Sbjct: 73  YPRLSCCLRSDSPGLGRLENKIFSVTNNTE---CGKLLEEIKCALCSPHSQSLFHSPERE 129

Query: 102 TPLR--TVPGLCQDYCLDMWHKCRGLFRHLSTDQELWALEGNLARFCRYLSLDDTDYCFP 159
              R   +P LC+DYC + ++ CRG   H+    +  A E     FC Y +  D   CFP
Sbjct: 130 VLERDLVLPLLCKDYCKEFFYTCRG---HIPGFLQTTADE-----FCFYYARKDGGLCFP 181

Query: 160 YLLVNKNLNSNLGHVVADAKGCLQL------------CLEEVANGLRNPVAMVHARDGTH 207
                K +     + +   +   ++            C++EV +GLR PV  +H+ DG+ 
Sbjct: 182 DF-PRKQVRGPASNYLDQMEEYDKVEEISRKHKHNCFCIQEVVSGLRQPVGALHSGDGSQ 240

Query: 208 RFFVAEQVGLVWAYLPDRSRLGKPFLNISRVVLTSPWEGDERGFLGIAFHPSFQHNRRLY 267
           R F+ E+ G V    P+     +P+L+I ++V +    GDERG L +AFHP+++ N +LY
Sbjct: 241 RLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLY 300

Query: 268 VYYSVGIRSSEW--------IRISEFRVSEDDENAVDHSSERIILEVKEPASNHNGGQLL 319
           V Y+       W        +R+ E+ VS  + + VD  + R+ LEV E    H GGQLL
Sbjct: 301 VSYTT--NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLL 358

Query: 320 FGDDGYLYIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRIDVDRKERGLPYGIPPDNPFV 379
           FG DG+LYI  GDG +  D           S   G VLR+DVD     +PY IP  NP  
Sbjct: 359 FGPDGFLYIILGDGMITLD---DMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHF 415

Query: 380 GDPAAQPEVYALGVRNMWRCSFDRGDPSSGTGRGRLFCGDV-GQNKFE-EVDVVERGGNY 437
                 PEV+A G+ +  RC+ DR  P+       + C D  G+N+    +  + +G +Y
Sbjct: 416 NSTNQPPEVFAHGLHDPGRCAVDR-HPTDININLTILCSDSNGKNRSSARILQIIKGKDY 474

Query: 438 GWRAREGFECYDRSLCANTSLNDLLPIFAYPHTVGKSVTGGYVYRGCEYPNLNGLYIFGD 497
                           +  SL +  P    P      + GG+VYRGC+   L G Y+FGD
Sbjct: 475 E---------------SEPSLLEFKPFSNGP------LVGGFVYRGCQSERLYGSYVFGD 513

Query: 498 FMSGRLMSLQENPGTGQWQYSEICMGHGQTCEFPGLINNYYPYIISFGEDEAGELYFMST 557
             +G  ++LQ++P T QWQ   +C+G   +C        +  +I+ FGEDE GE+Y +S+
Sbjct: 514 -RNGNFLTLQQSPVTKQWQEKPLCLGTSGSCR-----GYFSGHILGFGEDELGEVYILSS 567

Query: 558 GEPSATAPRGVVYKIID 574
            +       G +YKI+D
Sbjct: 568 SKSMTQTHNGKLYKIVD 584


>gi|40288197 GATA binding protein 6 [Homo sapiens]
          Length = 595

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 544 FGEDEAGELY----FMSTGEPSAT--APRGVVYKIIDASSCKARSAMPGYVPAPSVCSSL 597
           F  ++  E+Y     +S+  P+A   AP G V+    A++  A ++ P YVP   V S L
Sbjct: 139 FAPEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSML 198

Query: 598 TSQPFILQ 605
              P+ LQ
Sbjct: 199 PGLPYHLQ 206


>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
          Length = 1690

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 307 KEPASNHNGGQLLFGDDGYL--YIFTGDGGMAGDPFGTFGNAQNKSALLGKVLRIDVDRK 364
           K   S HNG +   GD G+       G GG  G P G  G   N   +LG V  I  DR 
Sbjct: 135 KPGMSGHNGSR---GDPGFPGGRGALGPGGPLGHP-GEKGEKGNSVFILGAVKGIQGDRG 190

Query: 365 ERGLPYGIP 373
           + GLP G+P
Sbjct: 191 DPGLP-GLP 198


>gi|20665034 tenascin XB isoform 2 [Homo sapiens]
          Length = 673

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)

Query: 474 SVTGGYVYRGCEYPNLNGLY 493
           S  G + YR C Y NLNGLY
Sbjct: 614 SYRGAWWYRNCHYANLNGLY 633


>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
          Length = 4242

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 12/20 (60%), Positives = 13/20 (65%)

Query: 474  SVTGGYVYRGCEYPNLNGLY 493
            S  G + YR C Y NLNGLY
Sbjct: 4183 SYRGAWWYRNCHYANLNGLY 4202


>gi|23111005 microfibrillar-associated protein 4 [Homo sapiens]
          Length = 255

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 476 TGGYVYRGCEYPNLNGLYIFGDFMS 500
           +G + +R C + NLNG Y+ G  +S
Sbjct: 204 SGAFWFRSCHFANLNGFYLGGSHLS 228


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.140    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,837,764
Number of Sequences: 37866
Number of extensions: 1348992
Number of successful extensions: 2409
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2390
Number of HSP's gapped (non-prelim): 10
length of query: 608
length of database: 18,247,518
effective HSP length: 108
effective length of query: 500
effective length of database: 14,157,990
effective search space: 7078995000
effective search space used: 7078995000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.