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Search of human proteins with 18104940
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18104940 cystatin 9-like precursor [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18104940 cystatin 9-like precursor [Homo sapiens] 315 7e-87
gi|226529477 cystatin 9 precursor [Homo sapiens] 110 3e-25
gi|4503105 cystatin SA precursor [Homo sapiens] 65 2e-11
gi|19882259 cystatin-like 1 precursor [Homo sapiens] 64 3e-11
gi|19882249 cystatin 11 isoform 1 precursor [Homo sapiens] 59 1e-09
gi|4503107 cystatin C precursor [Homo sapiens] 58 3e-09
gi|4503109 cystatin S precursor [Homo sapiens] 57 4e-09
gi|19882251 cystatin SN precursor [Homo sapiens] 55 2e-08
gi|19882256 cystatin D precursor [Homo sapiens] 52 2e-07
gi|4885163 cystatin 8 precursor [Homo sapiens] 49 2e-06
gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo ... 44 4e-05
gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo ... 44 4e-05
gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens] 44 5e-05
gi|20302139 cystatin F [Homo sapiens] 44 5e-05
gi|18644732 cystatin 11 isoform 2 precursor [Homo sapiens] 41 3e-04
gi|4503113 cystatin M precursor [Homo sapiens] 33 0.086
gi|150036266 cytochrome P450, family 4, subfamily F, polypeptide... 29 1.6
gi|22507409 TBC1 domain family, member 22A [Homo sapiens] 28 2.8
gi|30410728 fucosyltransferase 8 isoform a [Homo sapiens] 27 6.1
gi|30410726 fucosyltransferase 8 isoform a [Homo sapiens] 27 6.1
gi|30410724 fucosyltransferase 8 isoform a [Homo sapiens] 27 6.1
>gi|18104940 cystatin 9-like precursor [Homo sapiens]
Length = 147
Score = 315 bits (808), Expect = 7e-87
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MLGLPWKGGLSWALLLLLLGSQILLIYAWHFHEQRDCDEHNVMARYLPATVEFAVHTFNQ 60
MLGLPWKGGLSWALLLLLLGSQILLIYAWHFHEQRDCDEHNVMARYLPATVEFAVHTFNQ
Sbjct: 1 MLGLPWKGGLSWALLLLLLGSQILLIYAWHFHEQRDCDEHNVMARYLPATVEFAVHTFNQ 60
Query: 61 QSKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHFQESTELNNTF 120
QSKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHFQESTELNNTF
Sbjct: 61 QSKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHFQESTELNNTF 120
Query: 121 TCFFTISTRPWMTQFSLLNKTCLEGFH 147
TCFFTISTRPWMTQFSLLNKTCLEGFH
Sbjct: 121 TCFFTISTRPWMTQFSLLNKTCLEGFH 147
>gi|226529477 cystatin 9 precursor [Homo sapiens]
Length = 159
Score = 110 bits (276), Expect = 3e-25
Identities = 60/114 (52%), Positives = 75/114 (65%), Gaps = 5/114 (4%)
Query: 10 LSWALLLLLLGSQILLIYAWHFHEQRDCDEHNVMARYLPATVEFAVHTFNQQSKDYYAYR 69
+ WAL LLL+G Q+L+ YAW E+ + V ATVEFA++TFN QSK+ +AYR
Sbjct: 10 MPWALSLLLMGFQLLVTYAWCSEEEMGGNNKIVQDPMFLATVEFALNTFNVQSKEEHAYR 69
Query: 70 LGHILNSWKE-----QVESKTVFSMELLLGRTRCGKFEDDIDNCHFQESTELNN 118
L +L+SW+E + K VFSM L L +T C KFEDDIDNC FQES ELNN
Sbjct: 70 LLRVLSSWREDSMDRKWRGKMVFSMNLQLRQTVCRKFEDDIDNCPFQESLELNN 123
>gi|4503105 cystatin SA precursor [Homo sapiens]
Length = 141
Score = 65.1 bits (157), Expect = 2e-11
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 10 LSWAL--LLLLLGSQILLIYAWHFHEQRDCDEHNVMARYL-----PATVEFAVHTFNQQS 62
++W L LLLLL +Q + + AW E+ E + L + F + +N+ +
Sbjct: 1 MAWPLCTLLLLLATQAVAL-AWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKAT 59
Query: 63 KDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHFQESTELNNTFTC 122
+D Y RL +L + +EQ+ + ++ +GRT C K + ++D C F E EL C
Sbjct: 60 EDEYYRRLLRVLRA-REQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLC 118
Query: 123 FFTISTRPWMTQFSLLNKTCLE 144
F I PW + SL+N C E
Sbjct: 119 SFQIYEVPWEDRMSLVNSRCQE 140
>gi|19882259 cystatin-like 1 precursor [Homo sapiens]
Length = 145
Score = 64.3 bits (155), Expect = 3e-11
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 12 WALLLLLLGSQILLIYAWHFHEQRDCDEHNVMARYLPATVEFAVHTFNQQSKDYYAYRLG 71
W LLLL + +L HF + + + + +T+ F + ++N S D Y YR+
Sbjct: 6 WRNPLLLLIALVLSAKLGHFQRWEGFQQKLMSKKNMNSTLNFFIQSYNNASNDTYLYRVQ 65
Query: 72 HILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHFQESTELNNTFTCFFTISTRPW 131
++ S + Q+ + + + + +G T+C + + +C Q S +L + C I T PW
Sbjct: 66 RLIRS-QMQLTTGVEYIVTVKIGWTKCKRNDTSNSSCPLQ-SKKLRKSLICESLIYTMPW 123
Query: 132 MTQFSLLNKTCLEGFH 147
+ F L N +CLE H
Sbjct: 124 INYFQLWNNSCLEAEH 139
>gi|19882249 cystatin 11 isoform 1 precursor [Homo sapiens]
Length = 138
Score = 58.9 bits (141), Expect = 1e-09
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 1 MLGLPWKGGLSWALLLLLLGSQILLIYAWHFHEQRDCDEHNVMA--RYLPATVEFAVHTF 58
M+ PW+ AL LLL L+ + ++ H VMA Y ++++ +
Sbjct: 1 MMAEPWQ-----ALQLLLAILLTLMALPYQARKKTFLSVHEVMAVENYAKDSLQWITDQY 55
Query: 59 NQQSKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHFQESTELNN 118
N++S D Y +R+ +L + QV + + + + T C K E NC QE EL+
Sbjct: 56 NKESDDKYHFRIFRVLKV-QRQVTDHLEYHLNVEMQWTTCQKPETT--NCVPQER-ELHK 111
Query: 119 TFTCFFTISTRPWMTQFSLLNKTC 142
CFF++ PW Q+ +LNK+C
Sbjct: 112 QVNCFFSVFAVPWFEQYKILNKSC 135
>gi|4503107 cystatin C precursor [Homo sapiens]
Length = 146
Score = 57.8 bits (138), Expect = 3e-09
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 51 VEFAVHTFNQQSKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHF 110
++FAV +N+ S D Y R ++ + K+ V F +++ LGRT C K + ++DNC F
Sbjct: 53 LDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYF-LDVELGRTTCTKTQPNLDNCPF 111
Query: 111 QESTELNNTFTCFFTISTRPWMTQFSLLNKTC 142
+ L C F I PW +L TC
Sbjct: 112 HDQPHLKRKAFCSFQIYAVPWQGTMTLSKSTC 143
>gi|4503109 cystatin S precursor [Homo sapiens]
Length = 141
Score = 57.4 bits (137), Expect = 4e-09
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 46 YLPATVEFAVHTFNQQSKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDI 105
++ + FA+ +N+ ++D Y R +L + +EQ + ++ +GRT C K + ++
Sbjct: 43 WVQRALHFAISEYNKATEDEYYRRPLQVLRA-REQTFGGVNYFFDVEVGRTICTKSQPNL 101
Query: 106 DNCHFQESTELNNTFTCFFTISTRPWMTQFSLLNKTCLE 144
D C F E EL C F I PW + SL+N C E
Sbjct: 102 DTCAFHEQPELQKKQLCSFEIYEVPWEDRMSLVNSRCQE 140
>gi|19882251 cystatin SN precursor [Homo sapiens]
Length = 141
Score = 55.5 bits (132), Expect = 2e-08
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Query: 16 LLLLGSQILLIYAWHFHEQRDCDEHNVMA-----RYLPATVEFAVHTFNQQSKDYYAYRL 70
LLLL + + + AW E+ + ++ + FA+ +N+ +KD Y R
Sbjct: 8 LLLLLATLAVALAWSPKEEDRIIPGGIYNADLNDEWVQRALHFAISEYNKATKDDYYRRP 67
Query: 71 GHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHFQESTELNNTFTCFFTISTRP 130
+L + ++ V F ++ +GRT C K + ++D C F E EL C F I P
Sbjct: 68 LRVLRARQQTVGGVNYF-FDVEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSFEIYEVP 126
Query: 131 WMTQFSLLNKTCLE 144
W + SL+ C E
Sbjct: 127 WENRRSLVKSRCQE 140
>gi|19882256 cystatin D precursor [Homo sapiens]
Length = 142
Score = 52.0 bits (123), Expect = 2e-07
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 51 VEFAVHTFNQQ-SKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCH 109
++FA+ +N+ +KD Y R ++ ++ +Q+ + + GRT C K + ++DNC
Sbjct: 48 LDFAISEYNKVINKDEYYSRPLQVMAAY-QQIVGGVNYYFNVKFGRTTCTKSQPNLDNCP 106
Query: 110 FQESTELNNTFTCFFTISTRPWMTQFSLLNKTC 142
F + +L C F I+ PW + S+LN C
Sbjct: 107 FNDQPKLKEEEFCSFQINEVPWEDKISILNYKC 139
>gi|4885163 cystatin 8 precursor [Homo sapiens]
Length = 142
Score = 48.5 bits (114), Expect = 2e-06
Identities = 23/90 (25%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 53 FAVHTFNQQSKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHFQE 112
FA+ +N++S+D Y + + L + + QV + + +++ + R+ C K + C QE
Sbjct: 51 FAMQEYNKESEDKYVFLVVKTLQA-QLQVTNLLEYLIDVEIARSDCRKPLSTNEICAIQE 109
Query: 113 STELNNTFTCFFTISTRPWMTQFSLLNKTC 142
+++L +C F + PW +F+++ K C
Sbjct: 110 NSKLKRKLSCSFLVGALPWNGEFTVMEKKC 139
>gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo
sapiens]
Length = 537
Score = 44.3 bits (103), Expect = 4e-05
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 17/87 (19%)
Query: 45 RYLPATVEFAVHTFNQQSKDYYAYRL---------------GHILNSWKEQVESKTVFSM 89
+Y A++EFAV FN+ + + Y +RL H NS SK V
Sbjct: 390 QYFVASMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMA 449
Query: 90 --ELLLGRTRCGKFEDDIDNCHFQEST 114
+L +G T C K+++DIDNC QE +
Sbjct: 450 AGDLEMGLTICKKYDEDIDNCPLQEGS 476
>gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo
sapiens]
Length = 537
Score = 44.3 bits (103), Expect = 4e-05
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 17/87 (19%)
Query: 45 RYLPATVEFAVHTFNQQSKDYYAYRL---------------GHILNSWKEQVESKTVFSM 89
+Y A++EFAV FN+ + + Y +RL H NS SK V
Sbjct: 390 QYFVASMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMA 449
Query: 90 --ELLLGRTRCGKFEDDIDNCHFQEST 114
+L +G T C K+++DIDNC QE +
Sbjct: 450 AGDLEMGLTICKKYDEDIDNCPLQEGS 476
>gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens]
Length = 538
Score = 43.9 bits (102), Expect = 5e-05
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 17/87 (19%)
Query: 45 RYLPATVEFAVHTFNQQSKDYYAYRLGHILNSWKEQVESKTVFSM--------------- 89
+Y A++EFAV FN+ + + Y +RL + + ++ S V S
Sbjct: 391 QYFVASMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPGVMA 450
Query: 90 --ELLLGRTRCGKFEDDIDNCHFQEST 114
+L +G T C K+++DIDNC QE +
Sbjct: 451 AGDLEMGLTICKKYDEDIDNCPLQEGS 477
>gi|20302139 cystatin F [Homo sapiens]
Length = 167
Score = 43.9 bits (102), Expect = 5e-05
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 53 FAVHTFNQQSKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFED-DIDNCHFQ 111
++V FN + D + ++ I + + V+ + +E+ +GRT C K + +D+C FQ
Sbjct: 77 YSVEKFNNCTNDMFLFKESRITRALVQIVKGLK-YMLEVEIGRTTCKKNQHLRLDDCDFQ 135
Query: 112 ESTELNNTFTCFFTISTRPWMTQFSL 137
+ L T +C+ + PW+ F +
Sbjct: 136 TNHTLKQTLSCYSEVWVVPWLQHFEV 161
>gi|18644732 cystatin 11 isoform 2 precursor [Homo sapiens]
Length = 103
Score = 41.2 bits (95), Expect = 3e-04
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 46/144 (31%)
Query: 1 MLGLPWKGGLSWALLLLLLGSQILLIYAWHFHEQRDCDEHNVMA--RYLPATVEFAVHTF 58
M+ PW+ AL LLL L+ + ++ H VMA Y ++++ +
Sbjct: 1 MMAEPWQ-----ALQLLLAILLTLMALPYQARKKTFLSVHEVMAVENYAKDSLQWITDQY 55
Query: 59 NQQSKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHFQESTELNN 118
N++S D Y +R+ +L ++QV
Sbjct: 56 NKESDDKYHFRIFRVLKVQRQQV------------------------------------- 78
Query: 119 TFTCFFTISTRPWMTQFSLLNKTC 142
CFF++ PW Q+ +LNK+C
Sbjct: 79 --NCFFSVFAVPWFEQYKILNKSC 100
>gi|4503113 cystatin M precursor [Homo sapiens]
Length = 149
Score = 33.1 bits (74), Expect = 0.086
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 54 AVHTFNQQSKDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFED-----DIDNC 108
AV ++N S Y +R HI+ + + V F + + +G T C K D+ C
Sbjct: 55 AVASYNMGSNSIYYFRDTHIIKAQSQLVAGIKYF-LTMEMGSTDCRKTRVTGDHVDLTTC 113
Query: 109 HFQESTELNNTFTCFFTISTRPWMTQFSLLNKTCLE 144
+ C F + PW LL C++
Sbjct: 114 PLAAGAQ-QEKLRCDFEVLVVPWQNSSQLLKHNCVQ 148
>gi|150036266 cytochrome P450, family 4, subfamily F, polypeptide
12 [Homo sapiens]
Length = 524
Score = 28.9 bits (63), Expect = 1.6
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Query: 1 MLGLPWKG----GLS-WALLLLLLGSQILL-IYAWHFHEQRDC 37
+L LPW G +S W LLLL++GS +L I AW + +C
Sbjct: 3 LLSLPWLGLRPVAMSPWLLLLLVVGSWLLARILAWTYAFYNNC 45
>gi|22507409 TBC1 domain family, member 22A [Homo sapiens]
Length = 517
Score = 28.1 bits (61), Expect = 2.8
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 42 VMARYLPATVEFAVHTFNQQSKDYYAYRLGHILNSWKEQVESKT 85
+++ YLPA V+ T ++ K+Y+A+ + H +S ++V T
Sbjct: 234 LLSGYLPANVDRRPATLQRKQKEYFAF-IEHYYDSRNDEVHQDT 276
>gi|30410728 fucosyltransferase 8 isoform a [Homo sapiens]
Length = 575
Score = 26.9 bits (58), Expect = 6.1
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 5 PWKGGLSWALLLLLLGSQILLIYAWHFHEQRDCDEHN 41
PW G W +L+L +L H D +H+
Sbjct: 3 PWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHS 39
>gi|30410726 fucosyltransferase 8 isoform a [Homo sapiens]
Length = 575
Score = 26.9 bits (58), Expect = 6.1
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 5 PWKGGLSWALLLLLLGSQILLIYAWHFHEQRDCDEHN 41
PW G W +L+L +L H D +H+
Sbjct: 3 PWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHS 39
>gi|30410724 fucosyltransferase 8 isoform a [Homo sapiens]
Length = 575
Score = 26.9 bits (58), Expect = 6.1
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 5 PWKGGLSWALLLLLLGSQILLIYAWHFHEQRDCDEHN 41
PW G W +L+L +L H D +H+
Sbjct: 3 PWTGSWRWIMLILFAWGTLLFYIGGHLVRDNDHPDHS 39
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.138 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,619,302
Number of Sequences: 37866
Number of extensions: 219773
Number of successful extensions: 598
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 571
Number of HSP's gapped (non-prelim): 22
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.