BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17158035 tectorin beta [Homo sapiens]
(329 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17158035 tectorin beta [Homo sapiens] 681 0.0
gi|28372569 zona pellucida-like domain containing 1 [Homo sapiens] 90 3e-18
gi|56550049 uromodulin precursor [Homo sapiens] 80 2e-15
gi|59850812 uromodulin precursor [Homo sapiens] 80 2e-15
gi|134268640 tectorin alpha precursor [Homo sapiens] 79 4e-15
gi|119220571 zymogen granule membrane glycoprotein 2 isoform 2 [... 74 2e-13
gi|119220569 zymogen granule membrane glycoprotein 2 isoform 1 [... 74 2e-13
gi|119220573 zymogen granule membrane glycoprotein 2 isoform 4 [... 74 2e-13
gi|119220572 zymogen granule membrane glycoprotein 2 isoform 3 [... 74 2e-13
gi|145580584 uromodulin-like 1 isoform 1 precursor [Homo sapiens] 66 4e-11
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens] 66 4e-11
gi|30520377 CUB and zona pellucida-like domains 1 [Homo sapiens] 63 4e-10
gi|22749297 oncoprotein-induced transcript 3 [Homo sapiens] 53 3e-07
gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens] 52 6e-07
gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens] 52 6e-07
gi|148539844 deleted in malignant brain tumors 1 isoform c precu... 52 6e-07
gi|148539842 deleted in malignant brain tumors 1 isoform b precu... 52 6e-07
gi|148539840 deleted in malignant brain tumors 1 isoform a precu... 52 6e-07
gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo sa... 50 4e-06
gi|66348148 zona pellucida glycoprotein 1 [Homo sapiens] 35 0.070
gi|155029535 membrane-spanning 4-domains, subfamily A, member 13... 30 3.0
gi|157820785 SH2 domain containing 7 [Homo sapiens] 29 6.6
>gi|17158035 tectorin beta [Homo sapiens]
Length = 329
Score = 681 bits (1756), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MVTKAFVLLAIFAEASAKSCAPNKADVILVFCYPKTIITKIPECPYGWEVHQLALGGLCY 60
MVTKAFVLLAIFAEASAKSCAPNKADVILVFCYPKTIITKIPECPYGWEVHQLALGGLCY
Sbjct: 1 MVTKAFVLLAIFAEASAKSCAPNKADVILVFCYPKTIITKIPECPYGWEVHQLALGGLCY 60
Query: 61 NGVHEGGYYQFVIPDLSPKNKSYCGTQSEYKPPIYHFYSHIVSNDTTVIVKNQPVNYSFS 120
NGVHEGGYYQFVIPDLSPKNKSYCGTQSEYKPPIYHFYSHIVSNDTTVIVKNQPVNYSFS
Sbjct: 61 NGVHEGGYYQFVIPDLSPKNKSYCGTQSEYKPPIYHFYSHIVSNDTTVIVKNQPVNYSFS 120
Query: 121 CTYHSTYLVNQAAFDQRVATVHVKNGSMGTFESQLSLNFYTNAKFSIKKEAPFVLEASEI 180
CTYHSTYLVNQAAFDQRVATVHVKNGSMGTFESQLSLNFYTNAKFSIKKEAPFVLEASEI
Sbjct: 121 CTYHSTYLVNQAAFDQRVATVHVKNGSMGTFESQLSLNFYTNAKFSIKKEAPFVLEASEI 180
Query: 181 GSDLFAGVEAKGLSIRFKVVLNSCWATPSADFMYPLQWQLINKGCPTDETVLVHENGRDH 240
GSDLFAGVEAKGLSIRFKVVLNSCWATPSADFMYPLQWQLINKGCPTDETVLVHENGRDH
Sbjct: 181 GSDLFAGVEAKGLSIRFKVVLNSCWATPSADFMYPLQWQLINKGCPTDETVLVHENGRDH 240
Query: 241 RATFQFNAFRFQNIPKLSKVWLHCETFICDSEKLSCPVTCDKRKRLLRDQTGGVLVVELS 300
RATFQFNAFRFQNIPKLSKVWLHCETFICDSEKLSCPVTCDKRKRLLRDQTGGVLVVELS
Sbjct: 241 RATFQFNAFRFQNIPKLSKVWLHCETFICDSEKLSCPVTCDKRKRLLRDQTGGVLVVELS 300
Query: 301 LRSRGFSSLYSFSDVLHHLIMMLGICAVL 329
LRSRGFSSLYSFSDVLHHLIMMLGICAVL
Sbjct: 301 LRSRGFSSLYSFSDVLHHLIMMLGICAVL 329
>gi|28372569 zona pellucida-like domain containing 1 [Homo sapiens]
Length = 431
Score = 89.7 bits (221), Expect = 3e-18
Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 34/299 (11%)
Query: 14 EASAKSCAPNKADVILVFCYPKTIITKIPECPY---GWEVHQLALGGL-----CYNGVHE 65
+A+ S P + D I V+C + I KI C G+ LAL G C ++
Sbjct: 43 DANLHSRFPAERD-ISVYCGVQAITMKINFCTVLFSGYSETDLALNGRHGDSHCRGFINN 101
Query: 66 GGYYQFVIPDLSPKNKSYCGTQ---------SEY----KPPIYHFYSHIVSNDTTVIVKN 112
+ VI ++ CG S Y + + +I + D I+
Sbjct: 102 NTFPAVVIFIINLSTLEGCGNNLVVSTIPGVSAYGNATSVQVGNISGYIDTPDPPTIISY 161
Query: 113 QP-VNYSFSCTYHSTYLVNQAAFDQRVATVHVKNGSMGTFESQLSLNFYTNAKFSIKKEA 171
P + Y FSC+Y YLVN A + V+ + GTF S L+L Y ++ ++ +
Sbjct: 162 LPGLLYKFSCSYPLEYLVNNTQLASSSAAISVRENN-GTFVSTLNLLLYNDSTYNQQLII 220
Query: 172 PFVLEASEIGSDLFAGVEAKGLSIRFKVVLNSCWATPSADFMYPLQWQLINKGCPTDETV 231
P + + + +FA V+A L R+ V+++ C+ TPS + +++ L C D
Sbjct: 221 PSI--GLPLKTKVFAAVQATNLDGRWNVLMDYCYTTPSGNPNDDIRYDLF-LSCDKDPQT 277
Query: 232 LVHENGRDHRATFQFNAFRF--QNIPKLSKVWLHCETFICDSEKLSCPV---TCDKRKR 285
V ENGR R F F FRF K+S V+LHC T +C ++ CP C R+R
Sbjct: 278 TVIENGRSQRGRFSFEVFRFVKHKNQKMSTVFLHCVTKLCRAD--DCPFLMPICSHRER 334
>gi|56550049 uromodulin precursor [Homo sapiens]
Length = 640
Score = 80.5 bits (197), Expect = 2e-15
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 76 LSPKNKSYCGTQSEYKPPIYHFYSHIVSNDTTVIVKNQPVNYSFSCTYHSTYLVN-QAAF 134
++P CGT + + YS+ + +I+++ + +F+C+Y V+ + A
Sbjct: 381 VTPARDGPCGTVLT-RNETHATYSNTLYLADEIIIRDLNIKINFACSYPLDMKVSLKTAL 439
Query: 135 DQRVATVHVKNGSMGTFESQLSLNFYTNAKFSIKKEAPFVLEASEIGSDLFAGVEAKGLS 194
V+ ++++ G G F +++L + ++ + V ++E + L+ G G
Sbjct: 440 QPMVSALNIRVGGTGMFTVRMAL--FQTPSYTQPYQGSSVTLSTE--AFLYVGTMLDGGD 495
Query: 195 I-RFKVVLNSCWATPSADFMYPLQWQLINKGCP--TDETVLVHENGRDHRATFQFNAFRF 251
+ RF +++ +C+ATPS++ PL++ +I CP D T+ V ENG + F FRF
Sbjct: 496 LSRFALLMTNCYATPSSNATDPLKYFIIQDRCPHTRDSTIQVVENGESSQGRFSVQMFRF 555
Query: 252 QNIPKLSKVWLHCETFICDSEKLSCPVTC 280
V+LHCE ++CD+ C TC
Sbjct: 556 AG--NYDLVYLHCEVYLCDTMNEKCKPTC 582
>gi|59850812 uromodulin precursor [Homo sapiens]
Length = 640
Score = 80.5 bits (197), Expect = 2e-15
Identities = 54/209 (25%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 76 LSPKNKSYCGTQSEYKPPIYHFYSHIVSNDTTVIVKNQPVNYSFSCTYHSTYLVN-QAAF 134
++P CGT + + YS+ + +I+++ + +F+C+Y V+ + A
Sbjct: 381 VTPARDGPCGTVLT-RNETHATYSNTLYLADEIIIRDLNIKINFACSYPLDMKVSLKTAL 439
Query: 135 DQRVATVHVKNGSMGTFESQLSLNFYTNAKFSIKKEAPFVLEASEIGSDLFAGVEAKGLS 194
V+ ++++ G G F +++L + ++ + V ++E + L+ G G
Sbjct: 440 QPMVSALNIRVGGTGMFTVRMAL--FQTPSYTQPYQGSSVTLSTE--AFLYVGTMLDGGD 495
Query: 195 I-RFKVVLNSCWATPSADFMYPLQWQLINKGCP--TDETVLVHENGRDHRATFQFNAFRF 251
+ RF +++ +C+ATPS++ PL++ +I CP D T+ V ENG + F FRF
Sbjct: 496 LSRFALLMTNCYATPSSNATDPLKYFIIQDRCPHTRDSTIQVVENGESSQGRFSVQMFRF 555
Query: 252 QNIPKLSKVWLHCETFICDSEKLSCPVTC 280
V+LHCE ++CD+ C TC
Sbjct: 556 AG--NYDLVYLHCEVYLCDTMNEKCKPTC 582
>gi|134268640 tectorin alpha precursor [Homo sapiens]
Length = 2155
Score = 79.3 bits (194), Expect = 4e-15
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 85 GTQSEYKPPIYHFYSHIVSNDTTVIVKNQPVNYSFSCTYHSTYLVN-QAAFDQRVATVHV 143
GT YK ++ +N +I +++ +N FSC Y ++ + ++ +++
Sbjct: 1865 GTHIMYKNTLW---IESANNTGNIITRDRTINVEFSCAYELDIKISLDSVVKPMLSVINL 1921
Query: 144 KNGSM-GTFESQLSLNFYTNAKFSIK-KEAPFVLEASEIGSDLFAGVEAKGLSIRFKVV- 200
+ G+F ++++L Y NA + ++ VL ++ L+ GV G ++
Sbjct: 1922 TVPTQEGSFITKMAL--YKNASYKHPYRQGEVVLTTRDV---LYVGVFVVGADATHLILT 1976
Query: 201 LNSCWATPSADFMYPLQWQLINKGCPT--DETVLVHENGRDHRATFQFNAFRFQNIPKLS 258
LN C+ATP+ D L++ +I GC D T+ + EN F F+F I
Sbjct: 1977 LNKCYATPTRDSNDKLRYFIIEGGCQNLKDNTIGIEENAVSLTCRFHVTVFKF--IGDYD 2034
Query: 259 KVWLHCETFICDSEKLSCPVTCDKRKRLLRDQT 291
+V LHC +CDSEK SC +TC R+ D T
Sbjct: 2035 EVHLHCAVSLCDSEKYSCKITCPHNSRIATDYT 2067
>gi|119220571 zymogen granule membrane glycoprotein 2 isoform 2
[Homo sapiens]
Length = 534
Score = 73.9 bits (180), Expect = 2e-13
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 77 SPKNKSYCGTQSEYKPPIYHFYSHIVSNDTTVIVKNQPVNYSFSCTYHSTYLVN-QAAFD 135
SP S C E + + Y + +S I+++ +N +F C Y V+ QAA
Sbjct: 274 SPVQASACRNILE-RNQTHAIYKNTLSLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQ 332
Query: 136 QRVATVHVKNGSMGTFESQLSL---NFYTNAKFSIKKEAPFVLEASEIG--SDLFAG-VE 189
V++++V G F +++L YTN P+ +A E+ S L+ G +
Sbjct: 333 PIVSSLNVSVDGNGEFIVRMALFQDQNYTN---------PYEGDAVELSVESVLYVGAIL 383
Query: 190 AKGLSIRFKVVLNSCWATPSADFMYPLQWQLINKGCPT--DETVLVHENGRDHRATFQFN 247
+G + RF +VL +C+ATP+ D +++ +I C D T+ V ENG+ + F
Sbjct: 384 EQGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEENGQSSESRFSVQ 443
Query: 248 AFRFQNIPKLSKVWLHCETFICDSEKLSCPVTCDK 282
F F L V+LHCE +CDS C +C +
Sbjct: 444 MFMFAGHYDL--VFLHCEIHLCDSLNEQCQPSCSR 476
>gi|119220569 zymogen granule membrane glycoprotein 2 isoform 1
[Homo sapiens]
Length = 537
Score = 73.9 bits (180), Expect = 2e-13
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 77 SPKNKSYCGTQSEYKPPIYHFYSHIVSNDTTVIVKNQPVNYSFSCTYHSTYLVN-QAAFD 135
SP S C E + + Y + +S I+++ +N +F C Y V+ QAA
Sbjct: 277 SPVQASACRNILE-RNQTHAIYKNTLSLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQ 335
Query: 136 QRVATVHVKNGSMGTFESQLSL---NFYTNAKFSIKKEAPFVLEASEIG--SDLFAG-VE 189
V++++V G F +++L YTN P+ +A E+ S L+ G +
Sbjct: 336 PIVSSLNVSVDGNGEFIVRMALFQDQNYTN---------PYEGDAVELSVESVLYVGAIL 386
Query: 190 AKGLSIRFKVVLNSCWATPSADFMYPLQWQLINKGCPT--DETVLVHENGRDHRATFQFN 247
+G + RF +VL +C+ATP+ D +++ +I C D T+ V ENG+ + F
Sbjct: 387 EQGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEENGQSSESRFSVQ 446
Query: 248 AFRFQNIPKLSKVWLHCETFICDSEKLSCPVTCDK 282
F F L V+LHCE +CDS C +C +
Sbjct: 447 MFMFAGHYDL--VFLHCEIHLCDSLNEQCQPSCSR 479
>gi|119220573 zymogen granule membrane glycoprotein 2 isoform 4
[Homo sapiens]
Length = 387
Score = 73.9 bits (180), Expect = 2e-13
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 77 SPKNKSYCGTQSEYKPPIYHFYSHIVSNDTTVIVKNQPVNYSFSCTYHSTYLVN-QAAFD 135
SP S C E + + Y + +S I+++ +N +F C Y V+ QAA
Sbjct: 127 SPVQASACRNILE-RNQTHAIYKNTLSLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQ 185
Query: 136 QRVATVHVKNGSMGTFESQLSL---NFYTNAKFSIKKEAPFVLEASEIG--SDLFAG-VE 189
V++++V G F +++L YTN P+ +A E+ S L+ G +
Sbjct: 186 PIVSSLNVSVDGNGEFIVRMALFQDQNYTN---------PYEGDAVELSVESVLYVGAIL 236
Query: 190 AKGLSIRFKVVLNSCWATPSADFMYPLQWQLINKGCPT--DETVLVHENGRDHRATFQFN 247
+G + RF +VL +C+ATP+ D +++ +I C D T+ V ENG+ + F
Sbjct: 237 EQGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEENGQSSESRFSVQ 296
Query: 248 AFRFQNIPKLSKVWLHCETFICDSEKLSCPVTCDK 282
F F L V+LHCE +CDS C +C +
Sbjct: 297 MFMFAGHYDL--VFLHCEIHLCDSLNEQCQPSCSR 329
>gi|119220572 zymogen granule membrane glycoprotein 2 isoform 3
[Homo sapiens]
Length = 390
Score = 73.9 bits (180), Expect = 2e-13
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 77 SPKNKSYCGTQSEYKPPIYHFYSHIVSNDTTVIVKNQPVNYSFSCTYHSTYLVN-QAAFD 135
SP S C E + + Y + +S I+++ +N +F C Y V+ QAA
Sbjct: 130 SPVQASACRNILE-RNQTHAIYKNTLSLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQ 188
Query: 136 QRVATVHVKNGSMGTFESQLSL---NFYTNAKFSIKKEAPFVLEASEIG--SDLFAG-VE 189
V++++V G F +++L YTN P+ +A E+ S L+ G +
Sbjct: 189 PIVSSLNVSVDGNGEFIVRMALFQDQNYTN---------PYEGDAVELSVESVLYVGAIL 239
Query: 190 AKGLSIRFKVVLNSCWATPSADFMYPLQWQLINKGCPT--DETVLVHENGRDHRATFQFN 247
+G + RF +VL +C+ATP+ D +++ +I C D T+ V ENG+ + F
Sbjct: 240 EQGDTSRFNLVLRNCYATPTEDKADLVKYFIIRNSCSNQRDSTIHVEENGQSSESRFSVQ 299
Query: 248 AFRFQNIPKLSKVWLHCETFICDSEKLSCPVTCDK 282
F F L V+LHCE +CDS C +C +
Sbjct: 300 MFMFAGHYDL--VFLHCEIHLCDSLNEQCQPSCSR 332
>gi|145580584 uromodulin-like 1 isoform 1 precursor [Homo sapiens]
Length = 1318
Score = 66.2 bits (160), Expect = 4e-11
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 198 KVVLNSCWATPSADFMYPLQWQLINKGCPTDETVL-VHENGRDHRATFQFNAFRFQNIPK 256
KVVL CWATPS++ P+ + IN CP T V ENG ++A F+ F F N
Sbjct: 1151 KVVLTECWATPSSNARDPITFSFINNSCPVPNTYTNVIENGNSNKAQFKLRIFSFIND-- 1208
Query: 257 LSKVWLHCETFIC-DSEKLSCPVTCDKRKRLLRDQT 291
S V+LHC+ +C +S +C + C+ + L +T
Sbjct: 1209 -SIVYLHCKLRVCMESPGATCKINCNNFRLLQNSET 1243
>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
Length = 1446
Score = 66.2 bits (160), Expect = 4e-11
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 198 KVVLNSCWATPSADFMYPLQWQLINKGCPTDETVL-VHENGRDHRATFQFNAFRFQNIPK 256
KVVL CWATPS++ P+ + IN CP T V ENG ++A F+ F F N
Sbjct: 1279 KVVLTECWATPSSNARDPITFSFINNSCPVPNTYTNVIENGNSNKAQFKLRIFSFIND-- 1336
Query: 257 LSKVWLHCETFIC-DSEKLSCPVTCDKRKRLLRDQT 291
S V+LHC+ +C +S +C + C+ + L +T
Sbjct: 1337 -SIVYLHCKLRVCMESPGATCKINCNNFRLLQNSET 1371
>gi|30520377 CUB and zona pellucida-like domains 1 [Homo sapiens]
Length = 607
Score = 62.8 bits (151), Expect = 4e-10
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 98 YSHIV----SNDTTVIVKNQPVNYSFSCT--YHSTYLVNQAAFDQRVATVHVKNGSMGTF 151
Y++I+ S+ + VI + + + C ++ST + D + + ++G +
Sbjct: 338 YTNIITFSASSTSEVITRQKQLQIIVKCEMGHNSTVEIIYITEDDVIQS----QNALGKY 393
Query: 152 ESQLSLNFYTNAKFSIKKEAPFVLEASEIGSDLFAGVEAKGLSIRFKVVLNSCWATPSAD 211
+ ++L F +N+ E+P+ ++ ++ LF V V L++C A+P++D
Sbjct: 394 NTSMAL-FESNSFEKTILESPYYVDLNQT---LFVQVSLHTSDPNLVVFLDTCRASPTSD 449
Query: 212 FMYPLQWQLINKGCPTDETVLVHENGRDHRATFQFNAFRFQNIPKLSKVWLHCETFICDS 271
F P + LI GC DET V+ H FQFNAF+F + +S V+L C+ ICDS
Sbjct: 450 FASPT-YDLIKSGCSRDETCKVYPLF-GHYGRFQFNAFKF--LRSMSSVYLQCKVLICDS 505
Query: 272 --EKLSCPVTCDKRKR 285
+ C C R +
Sbjct: 506 SDHQSRCNQGCVSRSK 521
>gi|22749297 oncoprotein-induced transcript 3 [Homo sapiens]
Length = 545
Score = 53.1 bits (126), Expect = 3e-07
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 109 IVKNQPVNYSFSCTYHSTYLVNQAAFDQ-RVATVHVKNGSMGTFESQLSLNFYTNAKFSI 167
I++ + +C + Y +++ R + + + + + G F +L + + +F
Sbjct: 344 IIRTSKLLIPVTCEFPRLYTISEGYVPNLRNSPLEIMSRNHGIFP--FTLEIFKDNEF-- 399
Query: 168 KKEAPF--VLEASEIGSDLFAGVEAKGLSIRFKVVLNSCWATPSADFMYPLQWQLINKGC 225
E P+ L ++ L+ G+E + ++ SC+ATP++ L++ LI GC
Sbjct: 400 --EEPYREALPTLKLRDSLYFGIEPVVHVSGLESLVESCFATPTSKIDEVLKYYLIRDGC 457
Query: 226 PTDETVLVHENGRDHRAT-FQFNAFRFQNIPKLSKVWLHCETFICD--SEKLSCPVTCDK 282
+D++V + RDH A FQ F+F +V+LHC +C E+ C C +
Sbjct: 458 VSDDSVKQY-TSRDHLAKHFQVPVFKFVG-KDHKEVFLHCRVLVCGVLDERSRCAQGCHR 515
Query: 283 RKR 285
R R
Sbjct: 516 RMR 518
>gi|239755390 PREDICTED: similar to DMBT1 isoform 1 [Homo sapiens]
Length = 1662
Score = 52.4 bits (124), Expect = 6e-07
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 140 TVHVKNGSMGTFESQ-----LSLNFYTNAKFSIKKEA-PFVLEASEIGSDLFAGVEAKGL 193
T+HV N ++ E Q ++++FYT++ F + P+ ++ ++ DL+ E
Sbjct: 1484 TIHVANNTIQVEEVQYGNFDVNISFYTSSSFLYPVTSRPYYVDLNQ---DLYVQAEILHS 1540
Query: 194 SIRFKVVLNSCWATPSADFMYPLQWQLINKGCPTDETVLVHENGRDHRATFQFNAFRFQN 253
+ +++C A+P ++ L + LI GC D+T + + A F+F AF F N
Sbjct: 1541 DAVLTLFVDTCVASPYSNDFTSLTYDLIRSGCVRDDTYGPYSSPSLRIARFRFRAFHFLN 1600
Query: 254 IPKLSKVWLHCETFIC 269
+ V+L C+ +C
Sbjct: 1601 --RFPSVYLRCKMVVC 1614
>gi|239755388 PREDICTED: similar to DMBT1 isoform 2 [Homo sapiens]
Length = 1788
Score = 52.4 bits (124), Expect = 6e-07
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 140 TVHVKNGSMGTFESQ-----LSLNFYTNAKFSIKKEA-PFVLEASEIGSDLFAGVEAKGL 193
T+HV N ++ E Q ++++FYT++ F + P+ ++ ++ DL+ E
Sbjct: 1610 TIHVANNTIQVEEVQYGNFDVNISFYTSSSFLYPVTSRPYYVDLNQ---DLYVQAEILHS 1666
Query: 194 SIRFKVVLNSCWATPSADFMYPLQWQLINKGCPTDETVLVHENGRDHRATFQFNAFRFQN 253
+ +++C A+P ++ L + LI GC D+T + + A F+F AF F N
Sbjct: 1667 DAVLTLFVDTCVASPYSNDFTSLTYDLIRSGCVRDDTYGPYSSPSLRIARFRFRAFHFLN 1726
Query: 254 IPKLSKVWLHCETFIC 269
+ V+L C+ +C
Sbjct: 1727 --RFPSVYLRCKMVVC 1740
>gi|148539844 deleted in malignant brain tumors 1 isoform c precursor
[Homo sapiens]
Length = 2403
Score = 52.4 bits (124), Expect = 6e-07
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 140 TVHVKNGSMGTFESQ-----LSLNFYTNAKFSIKKEA-PFVLEASEIGSDLFAGVEAKGL 193
T+HV N ++ E Q ++++FYT++ F + P+ ++ ++ DL+ E
Sbjct: 2225 TIHVANNTIQVEEVQYGNFDVNISFYTSSSFLYPVTSRPYYVDLNQ---DLYVQAEILHS 2281
Query: 194 SIRFKVVLNSCWATPSADFMYPLQWQLINKGCPTDETVLVHENGRDHRATFQFNAFRFQN 253
+ +++C A+P ++ L + LI GC D+T + + A F+F AF F N
Sbjct: 2282 DAVLTLFVDTCVASPYSNDFTSLTYDLIRSGCVRDDTYGPYSSPSLRIARFRFRAFHFLN 2341
Query: 254 IPKLSKVWLHCETFIC 269
+ V+L C+ +C
Sbjct: 2342 --RFPSVYLRCKMVVC 2355
>gi|148539842 deleted in malignant brain tumors 1 isoform b precursor
[Homo sapiens]
Length = 2413
Score = 52.4 bits (124), Expect = 6e-07
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 140 TVHVKNGSMGTFESQ-----LSLNFYTNAKFSIKKEA-PFVLEASEIGSDLFAGVEAKGL 193
T+HV N ++ E Q ++++FYT++ F + P+ ++ ++ DL+ E
Sbjct: 2235 TIHVANNTIQVEEVQYGNFDVNISFYTSSSFLYPVTSRPYYVDLNQ---DLYVQAEILHS 2291
Query: 194 SIRFKVVLNSCWATPSADFMYPLQWQLINKGCPTDETVLVHENGRDHRATFQFNAFRFQN 253
+ +++C A+P ++ L + LI GC D+T + + A F+F AF F N
Sbjct: 2292 DAVLTLFVDTCVASPYSNDFTSLTYDLIRSGCVRDDTYGPYSSPSLRIARFRFRAFHFLN 2351
Query: 254 IPKLSKVWLHCETFIC 269
+ V+L C+ +C
Sbjct: 2352 --RFPSVYLRCKMVVC 2365
>gi|148539840 deleted in malignant brain tumors 1 isoform a precursor
[Homo sapiens]
Length = 1785
Score = 52.4 bits (124), Expect = 6e-07
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Query: 140 TVHVKNGSMGTFESQ-----LSLNFYTNAKFSIKKEA-PFVLEASEIGSDLFAGVEAKGL 193
T+HV N ++ E Q ++++FYT++ F + P+ ++ ++ DL+ E
Sbjct: 1607 TIHVANNTIQVEEVQYGNFDVNISFYTSSSFLYPVTSRPYYVDLNQ---DLYVQAEILHS 1663
Query: 194 SIRFKVVLNSCWATPSADFMYPLQWQLINKGCPTDETVLVHENGRDHRATFQFNAFRFQN 253
+ +++C A+P ++ L + LI GC D+T + + A F+F AF F N
Sbjct: 1664 DAVLTLFVDTCVASPYSNDFTSLTYDLIRSGCVRDDTYGPYSSPSLRIARFRFRAFHFLN 1723
Query: 254 IPKLSKVWLHCETFIC 269
+ V+L C+ +C
Sbjct: 1724 --RFPSVYLRCKMVVC 1737
>gi|10863987 zona pellucida glycoprotein 4 preproprotein [Homo
sapiens]
Length = 540
Score = 49.7 bits (117), Expect = 4e-06
Identities = 35/104 (33%), Positives = 45/104 (43%), Gaps = 18/104 (17%)
Query: 199 VVLNSCWATPSADFMYPLQWQLINKGCP----TDETVLVHENGR------DHRATFQFNA 248
++L CWATPS D + QW ++ KGCP +T L+ H F
Sbjct: 362 LLLQQCWATPSTDPLSQPQWPILVKGCPYIGDNYQTQLIPVQKALDLPFPSHHQRFSIFT 421
Query: 249 FRFQNIPKLSK------VWLHCETFICD-SEKLSCPVTCDKRKR 285
F F N P + K V LHC +C +E SC VTC R
Sbjct: 422 FSFVN-PTVEKQALRGPVHLHCSVSVCQPAETPSCVVTCPDLSR 464
>gi|66348148 zona pellucida glycoprotein 1 [Homo sapiens]
Length = 638
Score = 35.4 bits (80), Expect = 0.070
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 13/107 (12%)
Query: 199 VVLNSCWATPSADFMYPLQWQLINKGCP----TDETVLVHENG----RDHRATFQFNAFR 250
++L+ CW PSA+ QW +++ GCP + T +V +G + H F F
Sbjct: 452 LLLHQCWGAPSANPFQQPQWPILSDGCPFKGDSYRTQMVALDGATPFQSHYQRFTVATFA 511
Query: 251 FQNIPK----LSKVWLHCETFICDSEKL-SCPVTCDKRKRLLRDQTG 292
+ V+L C T C + L +C C R +G
Sbjct: 512 LLDSGSQRALRGLVYLFCSTSACHTSGLETCSTACSTGTTRQRRSSG 558
>gi|155029535 membrane-spanning 4-domains, subfamily A, member 13
isoform 2 [Homo sapiens]
Length = 112
Score = 30.0 bits (66), Expect = 3.0
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 113 QPVNYSFSCTYHSTYLVNQAAFDQRVATVHVKNGSMGTFESQLSLNFYTNAKFSI 167
+PV Y CT + + F RV ++G +G S++ L FY +FSI
Sbjct: 29 EPVTYKTGCTLWGIFFIIAGVFLIRVTKYPTRSGKLGREVSRILLFFY-GLEFSI 82
>gi|157820785 SH2 domain containing 7 [Homo sapiens]
Length = 451
Score = 28.9 bits (63), Expect = 6.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 278 VTCDKRKRLLRDQTGGVLVVELSLRSRGFSSLYSFSDVLHHLIM 321
+T + ++LLRD+ G ++ LS R+ G+ Y SD H ++
Sbjct: 56 ITRKQTEQLLRDKALGSFLIRLSDRATGYILSYRGSDRCRHFVI 99
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,404,515
Number of Sequences: 37866
Number of extensions: 549607
Number of successful extensions: 961
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 921
Number of HSP's gapped (non-prelim): 24
length of query: 329
length of database: 18,247,518
effective HSP length: 103
effective length of query: 226
effective length of database: 14,347,320
effective search space: 3242494320
effective search space used: 3242494320
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.