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Search of human proteins with 16950655
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16950655 cyclin D1 [Homo sapiens]
(295 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16950655 cyclin D1 [Homo sapiens] 590 e-169
gi|4502617 cyclin D2 [Homo sapiens] 358 2e-99
gi|4502619 cyclin D3 isoform 2 [Homo sapiens] 295 3e-80
gi|209862835 cyclin D3 isoform 1 [Homo sapiens] 201 6e-52
gi|209915553 cyclin D3 isoform 3 [Homo sapiens] 124 8e-29
gi|4502613 cyclin A [Homo sapiens] 97 2e-20
gi|17318565 cyclin E2 [Homo sapiens] 93 2e-19
gi|161377472 cyclin A1 isoform c [Homo sapiens] 93 2e-19
gi|161377470 cyclin A1 isoform c [Homo sapiens] 93 2e-19
gi|161377468 cyclin A1 isoform b [Homo sapiens] 93 2e-19
gi|4502611 cyclin A1 isoform a [Homo sapiens] 93 2e-19
gi|17318559 cyclin E1 isoform 1 [Homo sapiens] 90 3e-18
gi|17318561 cyclin E1 isoform 2 [Homo sapiens] 90 3e-18
gi|14327896 cyclin B1 [Homo sapiens] 82 4e-16
gi|4757930 cyclin B2 [Homo sapiens] 78 1e-14
gi|153791755 cyclin domain containing [Homo sapiens] 69 4e-12
gi|209915556 cyclin D3 isoform 4 [Homo sapiens] 69 6e-12
gi|242247025 cyclin N-terminal domain containing 2 isoform 2 [Ho... 68 8e-12
gi|40805832 cyclin G1 [Homo sapiens] 65 5e-11
gi|4757934 cyclin G1 [Homo sapiens] 65 5e-11
gi|197276674 cyclin J isoform 1 [Homo sapiens] 64 1e-10
gi|90669307 cyclin B3 isoform 3 [Homo sapiens] 64 2e-10
gi|118572588 cyclin F [Homo sapiens] 60 3e-09
gi|5802992 cyclin I [Homo sapiens] 59 7e-09
gi|16306525 cyclin B3 isoform 1 [Homo sapiens] 50 2e-06
gi|40254889 cyclin J isoform 2 [Homo sapiens] 49 4e-06
gi|4502623 cyclin H [Homo sapiens] 49 5e-06
gi|197276676 cyclin J isoform 3 [Homo sapiens] 49 5e-06
gi|89886237 cyclin I family, member 2 [Homo sapiens] 48 1e-05
gi|94680985 cyclin J-like [Homo sapiens] 47 3e-05
>gi|16950655 cyclin D1 [Homo sapiens]
Length = 295
Score = 590 bits (1520), Expect = e-169
Identities = 295/295 (100%), Positives = 295/295 (100%)
Query: 1 MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIV 60
MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIV
Sbjct: 1 MEHQLLCCEVETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIV 60
Query: 61 ATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLT 120
ATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLT
Sbjct: 61 ATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLT 120
Query: 121 AEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRK 180
AEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRK
Sbjct: 121 AEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRK 180
Query: 181 HAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCD 240
HAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCD
Sbjct: 181 HAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCD 240
Query: 241 PDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI 295
PDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI
Sbjct: 241 PDCLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI 295
>gi|4502617 cyclin D2 [Homo sapiens]
Length = 289
Score = 358 bits (920), Expect = 2e-99
Identities = 181/293 (61%), Positives = 224/293 (76%), Gaps = 6/293 (2%)
Query: 4 QLLCCEVETIRRAYPDANLL-NDRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVAT 62
+LLC EV+ +RRA D NLL +DRVL+ +L EE P SYFKCVQK++ P MR++VAT
Sbjct: 2 ELLCHEVDPVRRAVRDRNLLRDDRVLQNLLTIEERYLPQCSYFKCVQKDIQPYMRRMVAT 61
Query: 63 WMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAE 122
WMLEVCEEQKCEEEVFPLAMNYLDRFL+ P KS LQLLGA CMF+ASK+KET PLTAE
Sbjct: 62 WMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPKSHLQLLGAVCMFLASKLKETSPLTAE 121
Query: 123 KLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHA 182
KLCIYTDNSI+P+ELL+ EL+++ KLKWNLAA+TPHDFIEH L K+P+ E +IRKHA
Sbjct: 122 KLCIYTDNSIKPQELLEWELVVLGKLKWNLAAVTPHDFIEHILRKLPQQREKLSLIRKHA 181
Query: 183 QTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCDPD 242
QTF+ALCATD KF PPSM+A GSV AA+ GL + L+ LT L+++ D D
Sbjct: 182 QTFIALCATDFKFAMYPPSMIATGSVGAAICGLQQDEEVSSLTCDALTELLAKITNTDVD 241
Query: 243 CLRACQEQIEALLESSLRQAQQNMDPKAAEEEEEEEEEVDLACTPTDVRDVDI 295
CL+ACQEQIEA+L +SL+Q +Q+ + + E+E+D A TPTDVRD+D+
Sbjct: 242 CLKACQEQIEAVLLNSLQQYRQDQ-----RDGSKSEDELDQASTPTDVRDIDL 289
>gi|4502619 cyclin D3 isoform 2 [Homo sapiens]
Length = 292
Score = 295 bits (755), Expect = 3e-80
Identities = 153/295 (51%), Positives = 200/295 (67%), Gaps = 7/295 (2%)
Query: 4 QLLCCE-VETIRRAYPDANLLND-RVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVA 61
+LLCCE RA PD LL D RVL+++L+ EE P SYF+CVQ+E+ P MRK++A
Sbjct: 2 ELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKMLA 61
Query: 62 TWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTA 121
WMLEVCEEQ+CEEEVFPLAMNYLDR+LS P +K++LQLLGA CM +ASK++ET PLT
Sbjct: 62 YWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTI 121
Query: 122 EKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKH 181
EKLCIYTD+++ P +L E+L++ KLKW+LAA+ HDF+ L ++ + + +++KH
Sbjct: 122 EKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKH 181
Query: 182 AQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCDP 241
AQTF+ALCATD F PPSM+A GS+ AAVQGL S +S LT L+ + +
Sbjct: 182 AQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLGACS----MSGDELTELLAGITGTEV 237
Query: 242 DCLRACQEQIEALLESSLRQAQQ-NMDPKAAEEEEEEEEEVDLACTPTDVRDVDI 295
DCLRACQEQIEA L SLR+A Q + P + TPTDV + +
Sbjct: 238 DCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 292
>gi|209862835 cyclin D3 isoform 1 [Homo sapiens]
Length = 211
Score = 201 bits (511), Expect = 6e-52
Identities = 104/215 (48%), Positives = 140/215 (65%), Gaps = 5/215 (2%)
Query: 82 MNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQME 141
MNYLDR+LS P +K++LQLLGA CM +ASK++ET PLT EKLCIYTD+++ P +L E
Sbjct: 1 MNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWE 60
Query: 142 LLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPPS 201
+L++ KLKW+LAA+ HDF+ L ++ + + +++KHAQTF+ALCATD F PPS
Sbjct: 61 VLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPS 120
Query: 202 MVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCDPDCLRACQEQIEALLESSLRQ 261
M+A GS+ AAVQGL S +S LT L+ + + DCLRACQEQIEA L SLR+
Sbjct: 121 MIATGSIGAAVQGLGACS----MSGDELTELLAGITGTEVDCLRACQEQIEAALRESLRE 176
Query: 262 AQQ-NMDPKAAEEEEEEEEEVDLACTPTDVRDVDI 295
A Q + P + TPTDV + +
Sbjct: 177 ASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 211
>gi|209915553 cyclin D3 isoform 3 [Homo sapiens]
Length = 220
Score = 124 bits (312), Expect = 8e-29
Identities = 68/156 (43%), Positives = 93/156 (59%), Gaps = 5/156 (3%)
Query: 141 ELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPP 200
E+L++ KLKW+LAA+ HDF+ L ++ + + +++KHAQTF+ALCATD F PP
Sbjct: 69 EVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPP 128
Query: 201 SMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCDPDCLRACQEQIEALLESSLR 260
SM+A GS+ AAVQGL S +S LT L+ + + DCLRACQEQIEA L SLR
Sbjct: 129 SMIATGSIGAAVQGLGACS----MSGDELTELLAGITGTEVDCLRACQEQIEAALRESLR 184
Query: 261 QAQQ-NMDPKAAEEEEEEEEEVDLACTPTDVRDVDI 295
+A Q + P + TPTDV + +
Sbjct: 185 EASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 220
Score = 68.2 bits (165), Expect = 8e-12
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 4 QLLCCE-VETIRRAYPDANLLND-RVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVA 61
+LLCCE RA PD LL D RVL+++L+ EE P SYF+CVQ+E+ P MRK++A
Sbjct: 2 ELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEERYVPRASYFQCVQREIKPHMRKMLA 61
Query: 62 TWMLE 66
WMLE
Sbjct: 62 YWMLE 66
>gi|4502613 cyclin A [Homo sapiens]
Length = 432
Score = 96.7 bits (239), Expect = 2e-20
Identities = 53/136 (38%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
Query: 35 EETCAPSVSYFKCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPV 94
E C P V Y K Q ++ SMR I+ W++EV EE K + E LA+NY+DRFLS V
Sbjct: 190 EVKCKPKVGYMK-KQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSV 248
Query: 95 KKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAA 154
+ +LQL+G M +ASK +E P + TD++ +++L+ME L++ L ++LAA
Sbjct: 249 LRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEHLVLKVLTFDLAA 308
Query: 155 MTPHDFI-EHFLSKMP 169
T + F+ ++FL + P
Sbjct: 309 PTVNQFLTQYFLHQQP 324
>gi|17318565 cyclin E2 [Homo sapiens]
Length = 404
Score = 93.2 bits (230), Expect = 2e-19
Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 3/160 (1%)
Query: 31 MLKAEETCAPSVSYFKCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRF-L 89
MLK E +F+ + ++ P MR I+ W+LEVCE E F LA ++ DRF L
Sbjct: 117 MLKKESRYVHD-KHFEVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLAQDFFDRFML 175
Query: 90 SLEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLK 149
+ + + K+ LQL+G T +F+ASK++E ++ TD + E++L+MEL+++ LK
Sbjct: 176 TQKDINKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGACSEEDILRMELIILKALK 235
Query: 150 WNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQ-TFVAL 188
W L +T ++ FL + K ++ +++Q TF+ +
Sbjct: 236 WELCPVTIISWLNLFLQVDALKDAPKVLLPQYSQETFIQI 275
>gi|161377472 cyclin A1 isoform c [Homo sapiens]
Length = 421
Score = 93.2 bits (230), Expect = 2e-19
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 25 DRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNY 84
+ + + + +AE P Y K Q ++ MR I+ W++EV EE K E LA+N+
Sbjct: 169 EEIYQYLREAEIRHRPKAHYMK-KQPDITEGMRTILVDWLVEVGEEYKLRAETLYLAVNF 227
Query: 85 LDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLL 144
LDRFLS V + +LQL+G M +ASK +E P ++ TD++ +LL+ME LL
Sbjct: 228 LDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIYPPEVDEFVYITDDTYTKRQLLKMEHLL 287
Query: 145 VNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPPSMVA 204
+ L ++L T + F+ +L + + + + A+ ++L D F+ PS++A
Sbjct: 288 LKVLAFDLTVPTTNQFLLQYLRRQGVCVRTENLAKYVAE--LSLLEAD-PFLKYLPSLIA 344
Query: 205 AGSVVAAVQGLN 216
A + A +N
Sbjct: 345 AAAFCLANYTVN 356
>gi|161377470 cyclin A1 isoform c [Homo sapiens]
Length = 421
Score = 93.2 bits (230), Expect = 2e-19
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 25 DRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNY 84
+ + + + +AE P Y K Q ++ MR I+ W++EV EE K E LA+N+
Sbjct: 169 EEIYQYLREAEIRHRPKAHYMK-KQPDITEGMRTILVDWLVEVGEEYKLRAETLYLAVNF 227
Query: 85 LDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLL 144
LDRFLS V + +LQL+G M +ASK +E P ++ TD++ +LL+ME LL
Sbjct: 228 LDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIYPPEVDEFVYITDDTYTKRQLLKMEHLL 287
Query: 145 VNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPPSMVA 204
+ L ++L T + F+ +L + + + + A+ ++L D F+ PS++A
Sbjct: 288 LKVLAFDLTVPTTNQFLLQYLRRQGVCVRTENLAKYVAE--LSLLEAD-PFLKYLPSLIA 344
Query: 205 AGSVVAAVQGLN 216
A + A +N
Sbjct: 345 AAAFCLANYTVN 356
>gi|161377468 cyclin A1 isoform b [Homo sapiens]
Length = 464
Score = 93.2 bits (230), Expect = 2e-19
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 25 DRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNY 84
+ + + + +AE P Y K Q ++ MR I+ W++EV EE K E LA+N+
Sbjct: 212 EEIYQYLREAEIRHRPKAHYMK-KQPDITEGMRTILVDWLVEVGEEYKLRAETLYLAVNF 270
Query: 85 LDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLL 144
LDRFLS V + +LQL+G M +ASK +E P ++ TD++ +LL+ME LL
Sbjct: 271 LDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIYPPEVDEFVYITDDTYTKRQLLKMEHLL 330
Query: 145 VNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPPSMVA 204
+ L ++L T + F+ +L + + + + A+ ++L D F+ PS++A
Sbjct: 331 LKVLAFDLTVPTTNQFLLQYLRRQGVCVRTENLAKYVAE--LSLLEAD-PFLKYLPSLIA 387
Query: 205 AGSVVAAVQGLN 216
A + A +N
Sbjct: 388 AAAFCLANYTVN 399
>gi|4502611 cyclin A1 isoform a [Homo sapiens]
Length = 465
Score = 93.2 bits (230), Expect = 2e-19
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 25 DRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNY 84
+ + + + +AE P Y K Q ++ MR I+ W++EV EE K E LA+N+
Sbjct: 213 EEIYQYLREAEIRHRPKAHYMK-KQPDITEGMRTILVDWLVEVGEEYKLRAETLYLAVNF 271
Query: 85 LDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLL 144
LDRFLS V + +LQL+G M +ASK +E P ++ TD++ +LL+ME LL
Sbjct: 272 LDRFLSCMSVLRGKLQLVGTAAMLLASKYEEIYPPEVDEFVYITDDTYTKRQLLKMEHLL 331
Query: 145 VNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVKFISNPPSMVA 204
+ L ++L T + F+ +L + + + + A+ ++L D F+ PS++A
Sbjct: 332 LKVLAFDLTVPTTNQFLLQYLRRQGVCVRTENLAKYVAE--LSLLEAD-PFLKYLPSLIA 388
Query: 205 AGSVVAAVQGLN 216
A + A +N
Sbjct: 389 AAAFCLANYTVN 400
>gi|17318559 cyclin E1 isoform 1 [Homo sapiens]
Length = 410
Score = 89.7 bits (221), Expect = 3e-18
Identities = 55/193 (28%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 25 DRVLRAMLKAEETCAPSVSYFKCVQKEVL-PSMRKIVATWMLEVCEEQKCEEEVFPLAMN 83
+ V + ML E+T + + Q +L P MR I+ W++EVCE K E F LA +
Sbjct: 114 EEVWKIMLNKEKTYLRDQHFLE--QHPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQD 171
Query: 84 YLDRFLSL-EPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMEL 142
+ DR+++ E V K+ LQL+G + +F+A+K++E P + TD + +E+L MEL
Sbjct: 172 FFDRYMATQENVVKTLLQLIGISSLFIAAKLEEIYPPKLHQFAYVTDGACSGDEILTMEL 231
Query: 143 LLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQ-------TFVALCATDVKF 195
+++ LKW L+ +T ++ ++ + ++ ++ ++ Q + LC DV
Sbjct: 232 MIMKALKWRLSPLTIVSWLNVYMQVAYLNDLHEVLLPQYPQQIFIQIAELLDLCVLDVDC 291
Query: 196 ISNPPSMVAAGSV 208
+ P ++AA ++
Sbjct: 292 LEFPYGILAASAL 304
>gi|17318561 cyclin E1 isoform 2 [Homo sapiens]
Length = 395
Score = 89.7 bits (221), Expect = 3e-18
Identities = 55/193 (28%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 25 DRVLRAMLKAEETCAPSVSYFKCVQKEVL-PSMRKIVATWMLEVCEEQKCEEEVFPLAMN 83
+ V + ML E+T + + Q +L P MR I+ W++EVCE K E F LA +
Sbjct: 99 EEVWKIMLNKEKTYLRDQHFLE--QHPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQD 156
Query: 84 YLDRFLSL-EPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMEL 142
+ DR+++ E V K+ LQL+G + +F+A+K++E P + TD + +E+L MEL
Sbjct: 157 FFDRYMATQENVVKTLLQLIGISSLFIAAKLEEIYPPKLHQFAYVTDGACSGDEILTMEL 216
Query: 143 LLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQ-------TFVALCATDVKF 195
+++ LKW L+ +T ++ ++ + ++ ++ ++ Q + LC DV
Sbjct: 217 MIMKALKWRLSPLTIVSWLNVYMQVAYLNDLHEVLLPQYPQQIFIQIAELLDLCVLDVDC 276
Query: 196 ISNPPSMVAAGSV 208
+ P ++AA ++
Sbjct: 277 LEFPYGILAASAL 289
>gi|14327896 cyclin B1 [Homo sapiens]
Length = 433
Score = 82.4 bits (202), Expect = 4e-16
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
Query: 50 KEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFV 109
+EV +MR I+ W+++V + + +E + ++ +DRF+ V K LQL+G T MF+
Sbjct: 195 REVTGNMRAILIDWLVQVQMKFRLLQETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFI 254
Query: 110 ASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMP 169
ASK +E P TDN+ ++ QME+ ++ L + L P F+ SK+
Sbjct: 255 ASKYEEMYPPEIGDFAFVTDNTYTKHQIRQMEMKILRALNFGLGRPLPLHFLRR-ASKIG 313
Query: 170 EAEENKQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLN 216
E + + + K+ + L D + PPS +AAG+ A++ L+
Sbjct: 314 EVDVEQHTLAKY---LMELTMLDYDMVHFPPSQIAAGAFCLALKILD 357
>gi|4757930 cyclin B2 [Homo sapiens]
Length = 398
Score = 77.8 bits (190), Expect = 1e-14
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 4/178 (2%)
Query: 50 KEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFV 109
+++ MR I+ W+++V + + +E + + +DRFL ++PV + +LQL+G T + +
Sbjct: 159 RDINGRMRAILVDWLVQVHSKFRLLQETLYMCVGIMDRFLQVQPVSRKKLQLVGITALLL 218
Query: 110 ASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMP 169
ASK +E E TDN+ ++ +ME L++ +LK+ L P F+ SK
Sbjct: 219 ASKYEEMFSPNIEDFVYITDNAYTSSQIREMETLILKELKFELGRPLPLHFLRR-ASKAG 277
Query: 170 EAEENKQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYY 227
E + + + K+ + L D + PS VAA + + + L N YY
Sbjct: 278 EVDVEQHTLAKY---LMELTLIDYDMVHYHPSKVAAAASCLSQKVLGQGKWNLKQQYY 332
>gi|153791755 cyclin domain containing [Homo sapiens]
Length = 350
Score = 69.3 bits (168), Expect = 4e-12
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 49 QKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMF 108
Q +V R + +W++ V + E L +N LDRFL+ PV QLLG T +
Sbjct: 125 QPQVTAESRCKLLSWLIPVHRQFGLSFESLCLTVNTLDRFLTTTPVAADCFQLLGVTSLL 184
Query: 109 VASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKM 168
+A K E P ++L + ++L +E ++++KL + L A T F+EHF
Sbjct: 185 IACKQVEVHPPRVKQLLALCCGAFSRQQLCNLECIVLHKLHFTLGAPTISFFLEHFTHAR 244
Query: 169 PEAEENKQIIRKHAQTF----VALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSP 220
EA + + AQ L D F S PS++A + A + L + P
Sbjct: 245 VEAGQAEASEALEAQALARGVAELSLADYAFTSYSPSLLAICCLALADRMLRVSRP 300
>gi|209915556 cyclin D3 isoform 4 [Homo sapiens]
Length = 96
Score = 68.6 bits (166), Expect = 6e-12
Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 199 PPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKCDPDCLRACQEQIEALLESS 258
PPSM+A GS+ AAVQGL S +S LT L+ + + DCLRACQEQIEA L S
Sbjct: 3 PPSMIATGSIGAAVQGLGACS----MSGDELTELLAGITGTEVDCLRACQEQIEAALRES 58
Query: 259 LRQAQQ-NMDPKAAEEEEEEEEEVDLACTPTDVRDVDI 295
LR+A Q + P + TPTDV + +
Sbjct: 59 LREASQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 96
>gi|242247025 cyclin N-terminal domain containing 2 isoform 2 [Homo
sapiens]
Length = 307
Score = 68.2 bits (165), Expect = 8e-12
Identities = 37/107 (34%), Positives = 61/107 (57%)
Query: 46 KCVQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGAT 105
+ + + V P MR +V W+++V E + LA++ LD +LS V+ RLQLLG
Sbjct: 97 RALPRAVTPEMRALVVDWLVQVHEYLGLAGDTLYLAVHLLDSYLSAGRVRLHRLQLLGVA 156
Query: 106 CMFVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNL 152
C+FVA KM+E + LC+ + +S ELL+ E ++++L + L
Sbjct: 157 CLFVACKMEECVLPEPAFLCLLSADSFSRAELLRAERRILSRLDFRL 203
>gi|40805832 cyclin G1 [Homo sapiens]
Length = 295
Score = 65.5 bits (158), Expect = 5e-11
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 28 LRAMLKAEETCAPSVSYFKCVQK------EVLPSMRKIVATWMLEVCEEQKCEEEVFPLA 81
L A+L+ E C P V + ++ + +R +L + + + E F LA
Sbjct: 17 LNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEVKDLLSLTQFFGFDTETFSLA 76
Query: 82 MNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKE---TIPLTAEKLCIYTDNSIRPEELL 138
+N LDRFLS V+ L +G +C ++A K E +PL + + I + +L+
Sbjct: 77 VNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVPLATDLIRI-SQYRFTVSDLM 135
Query: 139 QMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVAL------CATD 192
+ME +++ K+ W + A T F++ + S + +EN + R+++ F L C
Sbjct: 136 RMEKIVLEKVCWKVKATTAFQFLQLYYSLL---QENLPLERRNSINFERLEAQLKACHCR 192
Query: 193 VKFISNPPSMVAAGSVVAAVQ 213
+ F PS++A + +Q
Sbjct: 193 IIFSKAKPSVLALSIIALEIQ 213
>gi|4757934 cyclin G1 [Homo sapiens]
Length = 295
Score = 65.5 bits (158), Expect = 5e-11
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 28 LRAMLKAEETCAPSVSYFKCVQK------EVLPSMRKIVATWMLEVCEEQKCEEEVFPLA 81
L A+L+ E C P V + ++ + +R +L + + + E F LA
Sbjct: 17 LNALLEQESRCQPKVCGLRLIESAHDNGLRMTARLRDFEVKDLLSLTQFFGFDTETFSLA 76
Query: 82 MNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKE---TIPLTAEKLCIYTDNSIRPEELL 138
+N LDRFLS V+ L +G +C ++A K E +PL + + I + +L+
Sbjct: 77 VNLLDRFLSKMKVQPKHLGCVGLSCFYLAVKSIEEERNVPLATDLIRI-SQYRFTVSDLM 135
Query: 139 QMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVAL------CATD 192
+ME +++ K+ W + A T F++ + S + +EN + R+++ F L C
Sbjct: 136 RMEKIVLEKVCWKVKATTAFQFLQLYYSLL---QENLPLERRNSINFERLEAQLKACHCR 192
Query: 193 VKFISNPPSMVAAGSVVAAVQ 213
+ F PS++A + +Q
Sbjct: 193 IIFSKAKPSVLALSIIALEIQ 213
>gi|197276674 cyclin J isoform 1 [Homo sapiens]
Length = 383
Score = 64.3 bits (155), Expect = 1e-10
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 29/205 (14%)
Query: 80 LAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKE---TIPLTAEKL----CIYTDNSI 132
LA+ LD F+ + +L L+ +C+ +ASK +E ++P E+L C+ N +
Sbjct: 63 LAVYLLDLFMDRYDISIQQLHLVALSCLLLASKFEEKEDSVP-KLEQLNSLGCMTNMNLV 121
Query: 133 RPEE-LLQMELLLVNKLKWNLAAMTPHDFIEHFLSK------------MPEAEENKQIIR 179
++ LL MELLL+ +WNL T FIE++LS+ M E+ K +
Sbjct: 122 LTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDGWPMICLEKTKLYMA 181
Query: 180 KHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKC 239
K+A F+ + D F++ PS+VAA V ++ L L SP +RLT +
Sbjct: 182 KYADYFLEVSLQDYAFLNYAPSLVAAACVASSRIILRL-SPTWPTRLHRLTAY------- 233
Query: 240 DPDCLRACQEQIEALLESSLRQAQQ 264
D L C E++ ++ +++A +
Sbjct: 234 SWDFLVQCIERLLIAHDNDVKEANK 258
>gi|90669307 cyclin B3 isoform 3 [Homo sapiens]
Length = 1395
Score = 63.5 bits (153), Expect = 2e-10
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 49 QKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMF 108
Q E+ MR I+ W++EV + E LA+ +D +L KK +LQLLGAT
Sbjct: 1153 QIEITSDMRAILVDWLVEVQVSFEMTHETLYLAVKLVDLYLMKAVCKKDKLQLLGATAFM 1212
Query: 109 VASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKM 168
+A+K +E + D++ + E+L ME+ ++N LK ++ + HFL +
Sbjct: 1213 IAAKFEEHNSPRVDDFVYICDDNYQRSEVLSMEINILNVLKCDINIPIAY----HFLRRY 1268
Query: 169 PEAEENKQIIRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYY 227
++ + + ++ S +AA S++ A+ L FL +Y
Sbjct: 1269 ARCIHTNMKTLTLSRYICEMTLQEYHYVQEKASKLAAASLLLALYMKKLGYWVPFLEHY 1327
>gi|118572588 cyclin F [Homo sapiens]
Length = 786
Score = 59.7 bits (143), Expect = 3e-09
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 48 VQKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCM 107
VQK + +MR I+ W++EV + L + +DR+L V + RLQLLG CM
Sbjct: 301 VQKGLNDTMRYILIDWLVEVATMKDFTSLCLHLTVECVDRYLRRRLVPRYRLQLLGIACM 360
Query: 108 FVASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSK 167
+ ++ LT + TDN+ + E+L++M +V+ L+ + T D+ E L+
Sbjct: 361 VICTRFISKEILTIREAVWLTDNTYKYEDLVRMMGEIVSALEGKIRVPTVVDYKEVLLTL 420
Query: 168 MPEAEENKQIIRKHAQTFVA-LCATDVKFISNPPSMVAAGSVVAA 211
+P ++ +H +F+ L + P+ +AA +++ A
Sbjct: 421 VP-----VELRTQHLCSFLCELSLLHTSLSAYAPARLAAAALLLA 460
>gi|5802992 cyclin I [Homo sapiens]
Length = 377
Score = 58.5 bits (140), Expect = 7e-09
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 50 KEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFV 109
+ V PS R V W+ ++ + E F LA + LDRFL+ L + +C F+
Sbjct: 38 QNVSPSQRDEVIQWLAKLKYQFNLYPETFALASSLLDRFLATVKAHPKYLSCIAISCFFL 97
Query: 110 ASKM---KETIP----LTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIE 162
A+K E IP L + C E+L+ME ++++KL W+L TP DF+
Sbjct: 98 AAKTVEEDERIPVLKVLARDSFC-----GCSSSEILRMERIILDKLNWDLHTATPLDFLH 152
Query: 163 HF 164
F
Sbjct: 153 IF 154
>gi|16306525 cyclin B3 isoform 1 [Homo sapiens]
Length = 291
Score = 50.1 bits (118), Expect = 2e-06
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Query: 76 EVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPE 135
E LA+ +D +L KK +LQLLGAT +A+K +E + D++ +
Sbjct: 76 ETLYLAVKLVDLYLMKAVCKKDKLQLLGATAFMIAAKFEEHNSPRVDDFVYICDDNYQRS 135
Query: 136 ELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEENKQIIRKHAQTFVALCATDVKF 195
E+L ME+ ++N LK ++ + HFL + ++ + + +
Sbjct: 136 EVLSMEINILNVLKCDINIPIAY----HFLRRYARCIHTNMKTLTLSRYICEMTLQEYHY 191
Query: 196 ISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYY 227
+ S +AA S++ A+ L FL +Y
Sbjct: 192 VQEKASKLAAASLLLALYMKKLGYWVPFLEHY 223
>gi|40254889 cyclin J isoform 2 [Homo sapiens]
Length = 372
Score = 49.3 bits (116), Expect = 4e-06
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 40/205 (19%)
Query: 80 LAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKE---TIPLTAEKL----CIYTDNSI 132
LA+ LD F+ + +L L+ +C+ +ASK +E ++P E+L C+ N +
Sbjct: 63 LAVYLLDLFMDRYDISIQQLHLVALSCLLLASKFEEKEDSVP-KLEQLNSLGCMTNMNLV 121
Query: 133 RPEE-LLQMELLLVNKLKWNLAAMTPHDFIEHFLSK------------MPEAEENKQIIR 179
++ LL MELLL+ +WNL T FIE++LS+ M E+ K +
Sbjct: 122 LTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSEAVHETDLHDGWPMICLEKTKLYMA 181
Query: 180 KHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVIKC 239
K+A F+ + S+ A + VA+ + + SP +RLT +
Sbjct: 182 KYADYFLEV------------SLQVAAACVASSRIILRLSPTWPTRLHRLTAY------- 222
Query: 240 DPDCLRACQEQIEALLESSLRQAQQ 264
D L C E++ ++ +++A +
Sbjct: 223 SWDFLVQCIERLLIAHDNDVKEANK 247
>gi|4502623 cyclin H [Homo sapiens]
Length = 323
Score = 48.9 bits (115), Expect = 5e-06
Identities = 63/274 (22%), Positives = 115/274 (41%), Gaps = 32/274 (11%)
Query: 11 ETIRRAYPDANLLNDRVLRAMLKAEETCAPSVSYFKCVQKEVLPSMRKIVATWMLEVCEE 70
E + R DAN R R A P+ F +E+ ++ K +LE C
Sbjct: 17 EQLARLRADAN----RKFRCKAVANGKVLPNDPVFLEPHEEM--TLCKYYEKRLLEFCSV 70
Query: 71 QK--CEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYT 128
K V A Y RF V + +++ TC F+A K+ E + + +
Sbjct: 71 FKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLR 130
Query: 129 DNSIRPE----ELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAE---ENKQIIRKH 181
++ + E ++L+ ELLL+ +L ++L P+ E FL + EN +I+RK
Sbjct: 131 ESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPILENPEILRKT 190
Query: 182 AQTFVALCATDVKFISNPPSMVAAGSVVAAVQ--GLNLRSPNNFLSYYRLTRFLSRVIKC 239
A F+ A ++ PS +A +++++ G+ + S +LS +
Sbjct: 191 ADDFLNRIALTDAYLLYTPSQIALTAILSSASRAGITMES------------YLSESLML 238
Query: 240 DPDCLRACQEQIEALLESSLRQAQQNMDPKAAEE 273
+ R C Q+ +++ S+R + +P +EE
Sbjct: 239 KEN--RTCLSQLLDIMK-SMRNLVKKYEPPRSEE 269
>gi|197276676 cyclin J isoform 3 [Homo sapiens]
Length = 371
Score = 48.9 bits (115), Expect = 5e-06
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 9/96 (9%)
Query: 80 LAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKE---TIPLTAEKL----CIYTDNSI 132
LA+ LD F+ + +L L+ +C+ +ASK +E ++P E+L C+ N +
Sbjct: 63 LAVYLLDLFMDRYDISIQQLHLVALSCLLLASKFEEKEDSVP-KLEQLNSLGCMTNMNLV 121
Query: 133 RPEE-LLQMELLLVNKLKWNLAAMTPHDFIEHFLSK 167
++ LL MELLL+ +WNL T FIE++LS+
Sbjct: 122 LTKQNLLHMELLLLETFQWNLCLPTAAHFIEYYLSE 157
>gi|89886237 cyclin I family, member 2 [Homo sapiens]
Length = 369
Score = 47.8 bits (112), Expect = 1e-05
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 49 QKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMF 108
Q E+ + ++V W+L + + F LA+ R L VK+ L T +
Sbjct: 143 QDEICDAFEEVVL-WLLRLQNTFYFSQSTFNLALTIFGRLLISVKVKEKYLHCATITSLR 201
Query: 109 VASKMKET---IPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHF 164
+A+K+ E IP + Y + P ELL+MEL ++++L W+L TP DF+ F
Sbjct: 202 LAAKVNEEEEFIPQVKDFTKHY-GSDYSPNELLRMELAILDRLHWDLYIGTPLDFLTIF 259
>gi|94680985 cyclin J-like [Homo sapiens]
Length = 435
Score = 46.6 bits (109), Expect = 3e-05
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 21/145 (14%)
Query: 131 SIRPEELLQMELLLVNKLKWNLAAMTPHDFIEHFLSKMPEAEEN-------------KQI 177
++ +ELL ELLL+ WNL TP F++++L +++ K+
Sbjct: 169 TLTKKELLSTELLLLEAFSWNLCLPTPAHFLDYYLLASVSQKDHHCHTWPTTCPRKTKEC 228
Query: 178 IRKHAQTFVALCATDVKFISNPPSMVAAGSVVAAVQGLNLRSPNNFLSYYRLTRFLSRVI 237
++++A F+ + D F PS+VAA V A+ L L SP Y+ TR L R+
Sbjct: 229 LKEYAHYFLEVTLQDHIFYKFQPSVVAAACVGASRICLQL-SP-----YW--TRDLQRIS 280
Query: 238 KCDPDCLRACQEQIEALLESSLRQA 262
+ L C E + + ++ L+ A
Sbjct: 281 SYSLEHLSTCIEILLVVYDNVLKDA 305
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.132 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,171,253
Number of Sequences: 37866
Number of extensions: 469474
Number of successful extensions: 5633
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 5262
Number of HSP's gapped (non-prelim): 252
length of query: 295
length of database: 18,247,518
effective HSP length: 102
effective length of query: 193
effective length of database: 14,385,186
effective search space: 2776340898
effective search space used: 2776340898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.