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Search of human proteins with 112734863
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|112734863 methyltransferase like 12 [Homo sapiens]
(240 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|112734863 methyltransferase like 12 [Homo sapiens] 499 e-142
gi|153945707 endothelin converting enzyme 2 isoform C [Homo sapi... 62 4e-10
gi|42542403 CGI-01 protein isoform 1 [Homo sapiens] 48 7e-06
gi|55956895 CGI-01 protein isoform 3 [Homo sapiens] 47 2e-05
gi|153945761 endothelin converting enzyme 2 isoform A [Homo sapi... 42 4e-04
gi|58219056 methyltransferase like 10 [Homo sapiens] 37 0.012
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 29 3.2
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 29 3.2
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 29 3.2
gi|42542405 CGI-01 protein isoform 2 [Homo sapiens] 29 4.2
gi|93588611 angiotensin II receptor-associated protein isoform e... 29 4.2
gi|93588503 angiotensin II receptor-associated protein isoform d... 29 4.2
gi|187761345 acyl-CoA synthetase family member 3 [Homo sapiens] 28 7.1
gi|187761343 acyl-CoA synthetase family member 3 [Homo sapiens] 28 7.1
gi|17402888 neuronal pentraxin receptor [Homo sapiens] 28 9.2
gi|143770880 laminin, beta 4 [Homo sapiens] 28 9.2
gi|226817316 SH3 domain containing 20 [Homo sapiens] 28 9.2
gi|194328738 hypothetical protein LOC23247 [Homo sapiens] 28 9.2
>gi|112734863 methyltransferase like 12 [Homo sapiens]
Length = 240
Score = 499 bits (1286), Expect = e-142
Identities = 240/240 (100%), Positives = 240/240 (100%)
Query: 1 MAALRRMLHLPSLMMGTCRPFAGSLADSCLADRCLWDRLHAQPRLGTVPTFDWFFGYDEV 60
MAALRRMLHLPSLMMGTCRPFAGSLADSCLADRCLWDRLHAQPRLGTVPTFDWFFGYDEV
Sbjct: 1 MAALRRMLHLPSLMMGTCRPFAGSLADSCLADRCLWDRLHAQPRLGTVPTFDWFFGYDEV 60
Query: 61 QGLLLPLLQEAQAASPLRVLDVGCGTSSLCTGLYTKSPHPVDVLGVDFSPVAVAHMNSLL 120
QGLLLPLLQEAQAASPLRVLDVGCGTSSLCTGLYTKSPHPVDVLGVDFSPVAVAHMNSLL
Sbjct: 61 QGLLLPLLQEAQAASPLRVLDVGCGTSSLCTGLYTKSPHPVDVLGVDFSPVAVAHMNSLL 120
Query: 121 EGGPGQTPLCPGHPASSLHFMHADAQNLGAVASSGSFQLLLDKGTWDAVARGGLPRAYQL 180
EGGPGQTPLCPGHPASSLHFMHADAQNLGAVASSGSFQLLLDKGTWDAVARGGLPRAYQL
Sbjct: 121 EGGPGQTPLCPGHPASSLHFMHADAQNLGAVASSGSFQLLLDKGTWDAVARGGLPRAYQL 180
Query: 181 LSECLRVLNPQGTLIQFSDEDPDVRLPCLEQGSYGWTVTVQELGPFRGITYFAYLIQGSH 240
LSECLRVLNPQGTLIQFSDEDPDVRLPCLEQGSYGWTVTVQELGPFRGITYFAYLIQGSH
Sbjct: 181 LSECLRVLNPQGTLIQFSDEDPDVRLPCLEQGSYGWTVTVQELGPFRGITYFAYLIQGSH 240
>gi|153945707 endothelin converting enzyme 2 isoform C [Homo
sapiens]
Length = 255
Score = 62.0 bits (149), Expect = 4e-10
Identities = 63/211 (29%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 36 WDRLHAQPRLGTVPTFDWFFGYDEVQGLLLPLLQEAQAASPLRVLDVGCGTSSLCTGLYT 95
WD+ + Q + P +DWF + + LL P L+ R+L +GCG S+L L+
Sbjct: 26 WDQRY-QGAADSAP-YDWFGDFSSFRALLEPELRPED-----RILVLGCGNSALSYELFL 78
Query: 96 KSPHPVDVLGVDFSPVAVAHMNSLLEGGPGQTPLCPGHPASSLHFMHADAQNLGAVASSG 155
P +V VD+S V VA M + P L + D + L S
Sbjct: 79 GG-FP-NVTSVDYSSVVVAAMQARHAHVP------------QLRWETMDVRKLDF--PSA 122
Query: 156 SFQLLLDKGTWDAVARG----------GLPRAYQLLSECLRVLNPQGTLIQFSDEDPDVR 205
SF ++L+KGT DA+ G G+ Q+LSE RVL P G I + P R
Sbjct: 123 SFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHFR 182
Query: 206 LPCLEQGSYGWTVTVQELGPFRGITYFAYLI 236
Q YGW++ G G + YL+
Sbjct: 183 TRHYAQAYYGWSLRHATYG--SGFHFHLYLM 211
>gi|42542403 CGI-01 protein isoform 1 [Homo sapiens]
Length = 699
Score = 48.1 bits (113), Expect = 7e-06
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 25/178 (14%)
Query: 51 FDWFFGYDEVQGLLLPLLQEAQAASPLRVLDVGCGTSSLCTGLYTKSPHPVDVLGVDFSP 110
F+W+ Y E+ G+L ++ + +VL +GCG S L LY D++ +D S
Sbjct: 29 FEWYGTYLELCGVLHKYIKPRE-----KVLVIGCGNSELSEQLYDVGYR--DIVNIDISE 81
Query: 111 VAVAHMNSLLEGGPGQTPLCPGHPASSLHFMHADAQNLGAVASSGSFQLLLDKGTWDAV- 169
V + M C + F+ D + SFQ++LDKGT DAV
Sbjct: 82 VVIKQMKE-----------CNATRRPQMSFLKMDMTQMEF--PDASFQVVLDKGTLDAVL 128
Query: 170 ---ARGGLPRAYQLLSECLRVLNPQGTLIQFSDEDPDVRLPCLEQGS-YGWTVTVQEL 223
L + ++L+E RVL G + S + + S GW V V ++
Sbjct: 129 TDEEEKTLQQVDRMLAEVGRVLQVGGRYLCISLAQAHILKKAVGHFSREGWMVRVHQV 186
>gi|55956895 CGI-01 protein isoform 3 [Homo sapiens]
Length = 543
Score = 46.6 bits (109), Expect = 2e-05
Identities = 41/147 (27%), Positives = 64/147 (43%), Gaps = 24/147 (16%)
Query: 51 FDWFFGYDEVQGLLLPLLQEAQAASPLRVLDVGCGTSSLCTGLYTKSPHPVDVLGVDFSP 110
F+W+ Y E+ G+L ++ + +VL +GCG S L LY D++ +D S
Sbjct: 29 FEWYGTYLELCGVLHKYIKPRE-----KVLVIGCGNSELSEQLYDVGYR--DIVNIDISE 81
Query: 111 VAVAHMNSLLEGGPGQTPLCPGHPASSLHFMHADAQNLGAVASSGSFQLLLDKGTWDAV- 169
V + M C + F+ D + SFQ++LDKGT DAV
Sbjct: 82 VVIKQMKE-----------CNATRRPQMSFLKMDMTQMEF--PDASFQVVLDKGTLDAVL 128
Query: 170 ---ARGGLPRAYQLLSECLRVLNPQGT 193
L + ++L+E RVL + T
Sbjct: 129 TDEEEKTLQQVDRMLAEVGRVLQGRET 155
>gi|153945761 endothelin converting enzyme 2 isoform A [Homo
sapiens]
Length = 883
Score = 42.4 bits (98), Expect = 4e-04
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 23/137 (16%)
Query: 36 WDRLHAQPRLGTVPTFDWFFGYDEVQGLLLPLLQEAQAASPLRVLDVGCGTSSLCTGLYT 95
WD+ + Q + P +DWF + + LL P L+ R+L +GCG S+L L+
Sbjct: 26 WDQRY-QGAADSAP-YDWFGDFSSFRALLEPELRPED-----RILVLGCGNSALSYELFL 78
Query: 96 KSPHPVDVLGVDFSPVAVAHMNSLLEGGPGQTPLCPGHPASSLHFMHADAQNLGAVASSG 155
P +V VD+S V VA M + P L + D + L S
Sbjct: 79 GG-FP-NVTSVDYSSVVVAAMQARHAHVP------------QLRWETMDVRKLDF--PSA 122
Query: 156 SFQLLLDKGTWDAVARG 172
SF ++L+KGT DA+ G
Sbjct: 123 SFDVVLEKGTLDALLAG 139
>gi|58219056 methyltransferase like 10 [Homo sapiens]
Length = 291
Score = 37.4 bits (85), Expect = 0.012
Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 25/205 (12%)
Query: 20 PFAGSLADSCLADRCLWDRLHAQPRLGTV----PTFDWFFGYDEVQGLLLPLLQEAQAAS 75
P S L R WD ++ + L T T + +FG +E L+ +Q+ +
Sbjct: 22 PGEDGFVPSALGTREHWDAVYER-ELQTFREYGDTGEIWFG-EESMNRLIRWMQKHKIPL 79
Query: 76 PLRVLDVGCGTSSLCTGLYTKSPHPVDVLGVDFSPVAVAHMNSLLEGGPGQTPLCPGHPA 135
VLD+G G L ++ G+D+SP A+ S++E
Sbjct: 80 DASVLDIGTGNGVFLVELAKFGFS--NITGIDYSPSAIQLSGSIIEK----------EGL 127
Query: 136 SSLHFMHADAQNLGAVASSGSFQLLLDKGTWDAVA---RGGLPRAYQLLSECLRVLNPQG 192
S++ D NL S F + +DKGT+DA++ + + Q + RVL +G
Sbjct: 128 SNIKLKVEDFLNLSTQLSG--FHICIDKGTFDAISLNPDNAIEKRKQYVKSLSRVLKVKG 185
Query: 193 TLIQFSDEDPDVRLPCLEQGSYGWT 217
+ S L L + S GW+
Sbjct: 186 FFLITSCNWTKEEL--LNEFSEGWS 208
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 29.3 bits (64), Expect = 3.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 121 EGGPGQTPLCPGHPASSLHFMHADAQNLGAVASS 154
EGG + PLCPG PA + A GA S+
Sbjct: 755 EGGGSEAPLCPGPPAGEEPAISEAAPEAGAPTSA 788
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 29.3 bits (64), Expect = 3.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 121 EGGPGQTPLCPGHPASSLHFMHADAQNLGAVASS 154
EGG + PLCPG PA + A GA S+
Sbjct: 824 EGGGSEAPLCPGPPAGEEPAISEAAPEAGAPTSA 857
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sapiens]
Length = 1152
Score = 29.3 bits (64), Expect = 3.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 121 EGGPGQTPLCPGHPASSLHFMHADAQNLGAVASS 154
EGG + PLCPG PA + A GA S+
Sbjct: 1089 EGGGSEAPLCPGPPAGEEPAISEAAPEAGAPTSA 1122
>gi|42542405 CGI-01 protein isoform 2 [Homo sapiens]
Length = 613
Score = 28.9 bits (63), Expect = 4.2
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 156 SFQLLLDKGTWDAV----ARGGLPRAYQLLSECLRVLNPQGTLIQFSDEDPDVRLPCLEQ 211
SFQ++LDKGT DAV L + ++L+E RVL G + S + +
Sbjct: 28 SFQVVLDKGTLDAVLTDEEEKTLQQVDRMLAEVGRVLQVGGRYLCISLAQAHILKKAVGH 87
Query: 212 GS-YGWTVTVQEL 223
S GW V V ++
Sbjct: 88 FSREGWMVRVHQV 100
>gi|93588611 angiotensin II receptor-associated protein isoform e
[Homo sapiens]
Length = 147
Score = 28.9 bits (63), Expect = 4.2
Identities = 35/121 (28%), Positives = 45/121 (37%), Gaps = 31/121 (25%)
Query: 30 LADRCLWDRLHAQPRLGTVPTFDWFFGYDEVQGLLLPLLQEAQAASP-----LRVL---- 80
L C W A+PRL T+ E+ L L A A+ LR+L
Sbjct: 17 LLTTCFWRHFSAKPRLETI----------ELTCALCKLRSAAHRATAGLHCILRLLCLGQ 66
Query: 81 -------DVGCGTSSLCTGLYTKSPHPVDVLGVDFSPVAVAHMNSLLEGGP-GQTPLCPG 132
VGCG++ GL+ + H L P AH + L G P G PL G
Sbjct: 67 LHHPGLGRVGCGSA----GLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHGPLWRG 122
Query: 133 H 133
H
Sbjct: 123 H 123
>gi|93588503 angiotensin II receptor-associated protein isoform d
[Homo sapiens]
Length = 155
Score = 28.9 bits (63), Expect = 4.2
Identities = 35/121 (28%), Positives = 45/121 (37%), Gaps = 31/121 (25%)
Query: 30 LADRCLWDRLHAQPRLGTVPTFDWFFGYDEVQGLLLPLLQEAQAASP-----LRVL---- 80
L C W A+PRL T+ E+ L L A A+ LR+L
Sbjct: 17 LLTTCFWRHFSAKPRLETI----------ELTCALCKLRSAAHRATAGLHCILRLLCLGQ 66
Query: 81 -------DVGCGTSSLCTGLYTKSPHPVDVLGVDFSPVAVAHMNSLLEGGP-GQTPLCPG 132
VGCG++ GL+ + H L P AH + L G P G PL G
Sbjct: 67 LHHPGLGRVGCGSA----GLHRRHKHVSGWLAGHHLPGHRAHQHLLPAGQPHGHGPLWRG 122
Query: 133 H 133
H
Sbjct: 123 H 123
>gi|187761345 acyl-CoA synthetase family member 3 [Homo sapiens]
Length = 576
Score = 28.1 bits (61), Expect = 7.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 101 VDVLGVDFSPVAVAHMNSLLEGGPGQTPLCPGHPASSLHFMHADAQNLGAVASSGSFQLL 160
V L + + VA S + GG PL HPA+ L ++ D+Q+ +AS +LL
Sbjct: 98 VSFLCANDASYVVAQWASWMSGGVA-VPLYRKHPAAQLEYVICDSQSSVVLASQEYLELL 156
>gi|187761343 acyl-CoA synthetase family member 3 [Homo sapiens]
Length = 576
Score = 28.1 bits (61), Expect = 7.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 101 VDVLGVDFSPVAVAHMNSLLEGGPGQTPLCPGHPASSLHFMHADAQNLGAVASSGSFQLL 160
V L + + VA S + GG PL HPA+ L ++ D+Q+ +AS +LL
Sbjct: 98 VSFLCANDASYVVAQWASWMSGGVA-VPLYRKHPAAQLEYVICDSQSSVVLASQEYLELL 156
>gi|17402888 neuronal pentraxin receptor [Homo sapiens]
Length = 500
Score = 27.7 bits (60), Expect = 9.2
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 12/67 (17%)
Query: 73 AASPLRVLDVGCGTSSLCTGLYTKSPHPVDVLGVDFSPVAVAHMNSLLEGGPGQTPLCPG 132
AASP R L G +S+ +G SP P L GG P PG
Sbjct: 29 AASPARALPGGADNASVASGA-AASPGPQRSLSALHGA-----------GGSAGPPALPG 76
Query: 133 HPASSLH 139
PA+S H
Sbjct: 77 APAASAH 83
>gi|143770880 laminin, beta 4 [Homo sapiens]
Length = 1761
Score = 27.7 bits (60), Expect = 9.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 122 GGPGQTPLCPGHPASSLHFMHADAQNL 148
G P + LCP P+S+ +F H+ QNL
Sbjct: 905 GQPCRPCLCPDDPSSNQYFAHSCYQNL 931
>gi|226817316 SH3 domain containing 20 [Homo sapiens]
Length = 263
Score = 27.7 bits (60), Expect = 9.2
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 112 AVAHMNSLLEGGPG---QTPLCPGHPASSLHFMHADAQN--LGAVASSGSFQLLLDKGTW 166
A +SL G P P P PA SL+ + A + G + SSGSF+ G+W
Sbjct: 128 AATQRSSLAPGLPACLYLRPAAPVRPAQSLNDLACAAVSPPAGLLGSSGSFKACSVAGSW 187
Query: 167 ---DAVARGGLPRAYQLLSE 183
+AR Y+++ +
Sbjct: 188 VCPRPLARSDSENVYEVIQD 207
>gi|194328738 hypothetical protein LOC23247 [Homo sapiens]
Length = 1618
Score = 27.7 bits (60), Expect = 9.2
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 91 TGLYTKSPHPVDVLGVDFSPVAVAHMNSLLEGGPGQTP-LCPGHPASSLHFMHADAQNLG 149
T LY SPH VD+ +N L G +P CP HP L F+ + + LG
Sbjct: 506 TKLYV-SPHDVDIRNTATPGELGRLVNRNLAGKKDSSPWTCPFHPPLQLFFVIRNTRQLG 564
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.139 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,353,464
Number of Sequences: 37866
Number of extensions: 510407
Number of successful extensions: 1017
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1006
Number of HSP's gapped (non-prelim): 18
length of query: 240
length of database: 18,247,518
effective HSP length: 99
effective length of query: 141
effective length of database: 14,498,784
effective search space: 2044328544
effective search space used: 2044328544
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.