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Search of human proteins with 169213453
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
(329 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sap... 699 0.0
gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sap... 699 0.0
gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo sap... 699 0.0
gi|239752655 PREDICTED: hypothetical protein [Homo sapiens] 106 3e-23
gi|239747208 PREDICTED: hypothetical protein [Homo sapiens] 106 3e-23
gi|239740999 PREDICTED: hypothetical protein [Homo sapiens] 105 6e-23
gi|153252110 ring finger protein 183 [Homo sapiens] 69 6e-12
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 57 2e-08
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 56 5e-08
gi|84993742 tripartite motif-containing 71 [Homo sapiens] 55 9e-08
gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase... 54 1e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 52 7e-07
gi|150378539 piccolo isoform 1 [Homo sapiens] 52 7e-07
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 51 2e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 2e-06
gi|39812378 RAN binding protein 9 [Homo sapiens] 50 3e-06
gi|226442736 ring finger protein 222 [Homo sapiens] 50 4e-06
gi|239745703 PREDICTED: ring finger protein 222 [Homo sapiens] 50 4e-06
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 50 4e-06
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 49 6e-06
gi|239756718 PREDICTED: ring finger protein 222 [Homo sapiens] 49 8e-06
gi|239751213 PREDICTED: ring finger protein 222 [Homo sapiens] 49 8e-06
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 48 1e-05
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 48 1e-05
gi|56605981 tripartite motif-containing 72 [Homo sapiens] 48 1e-05
gi|153791514 tripartite motif-containing 32 [Homo sapiens] 48 1e-05
gi|153792582 tripartite motif-containing 32 [Homo sapiens] 48 1e-05
gi|47132519 Ras association and pleckstrin homology domains 1 is... 47 2e-05
gi|22027541 programmed cell death 7 [Homo sapiens] 47 2e-05
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 47 3e-05
>gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 699 bits (1803), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MPCPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPAS 60
MPCPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPAS
Sbjct: 1 MPCPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPAS 60
Query: 61 PVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPR 120
PVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPR
Sbjct: 61 PVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPR 120
Query: 121 RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLR 180
RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLR
Sbjct: 121 RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLR 180
Query: 181 LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALA 240
LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALA
Sbjct: 181 LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALA 240
Query: 241 PAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDPAEAERTLD 300
PAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDPAEAERTLD
Sbjct: 241 PAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDPAEAERTLD 300
Query: 301 RRSDGTWGTEAGPGWAPWPRGARRLWGSQ 329
RRSDGTWGTEAGPGWAPWPRGARRLWGSQ
Sbjct: 301 RRSDGTWGTEAGPGWAPWPRGARRLWGSQ 329
>gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 699 bits (1803), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MPCPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPAS 60
MPCPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPAS
Sbjct: 1 MPCPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPAS 60
Query: 61 PVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPR 120
PVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPR
Sbjct: 61 PVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPR 120
Query: 121 RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLR 180
RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLR
Sbjct: 121 RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLR 180
Query: 181 LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALA 240
LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALA
Sbjct: 181 LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALA 240
Query: 241 PAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDPAEAERTLD 300
PAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDPAEAERTLD
Sbjct: 241 PAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDPAEAERTLD 300
Query: 301 RRSDGTWGTEAGPGWAPWPRGARRLWGSQ 329
RRSDGTWGTEAGPGWAPWPRGARRLWGSQ
Sbjct: 301 RRSDGTWGTEAGPGWAPWPRGARRLWGSQ 329
>gi|169213453 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 699 bits (1803), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MPCPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPAS 60
MPCPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPAS
Sbjct: 1 MPCPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPAS 60
Query: 61 PVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPR 120
PVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPR
Sbjct: 61 PVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPR 120
Query: 121 RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLR 180
RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLR
Sbjct: 121 RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLR 180
Query: 181 LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALA 240
LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALA
Sbjct: 181 LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALA 240
Query: 241 PAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDPAEAERTLD 300
PAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDPAEAERTLD
Sbjct: 241 PAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDPAEAERTLD 300
Query: 301 RRSDGTWGTEAGPGWAPWPRGARRLWGSQ 329
RRSDGTWGTEAGPGWAPWPRGARRLWGSQ
Sbjct: 301 RRSDGTWGTEAGPGWAPWPRGARRLWGSQ 329
>gi|239752655 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 106 bits (264), Expect = 3e-23
Identities = 86/243 (35%), Positives = 106/243 (43%), Gaps = 40/243 (16%)
Query: 18 SGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDGVFKL 77
S P SP S +PRSP G+PGS + ASP+EC IC S +D +FK
Sbjct: 23 SMPRSPSSAGSPRSP---------------GTPGSERV---ASPLECSICFSGYDNIFKT 64
Query: 78 PKRLDCGHVFCLECLARLSLAT---AGGGNAVACPVCRAPTRLAPRRGLPALPTQSGLLP 134
PK L C HVFCLECLARL+ A GG AV CP CR PT + P G PAL T L
Sbjct: 65 PKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPP-AGAPALCTSRQL-- 121
Query: 135 RDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRK-------ARAPPPPPPLRLGRPLSR 187
AR P + L +P P PG + P PP+ P R
Sbjct: 122 -QARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR 180
Query: 188 RLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSG-------PPRPQLVALA 240
R LA W LV+A L++ + + A +G PPRP + A
Sbjct: 181 RGRLAR-CWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTA 239
Query: 241 PAP 243
+P
Sbjct: 240 ASP 242
>gi|239747208 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 106 bits (264), Expect = 3e-23
Identities = 86/243 (35%), Positives = 106/243 (43%), Gaps = 40/243 (16%)
Query: 18 SGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDGVFKL 77
S P SP S +PRSP G+PGS + ASP+EC IC S +D +FK
Sbjct: 23 SMPRSPSSAGSPRSP---------------GTPGSERV---ASPLECSICFSGYDNIFKT 64
Query: 78 PKRLDCGHVFCLECLARLSLAT---AGGGNAVACPVCRAPTRLAPRRGLPALPTQSGLLP 134
PK L C HVFCLECLARL+ A GG AV CP CR PT + P G PAL T L
Sbjct: 65 PKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPP-AGAPALCTSRQL-- 121
Query: 135 RDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRK-------ARAPPPPPPLRLGRPLSR 187
AR P + L +P P PG + P PP+ P R
Sbjct: 122 -QARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPVPARDPAPR 180
Query: 188 RLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSG-------PPRPQLVALA 240
R LA W LV+A L++ + + A +G PPRP + A
Sbjct: 181 RGRLAR-CWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTA 239
Query: 241 PAP 243
+P
Sbjct: 240 ASP 242
>gi|239740999 PREDICTED: hypothetical protein [Homo sapiens]
Length = 249
Score = 105 bits (262), Expect = 6e-23
Identities = 86/243 (35%), Positives = 105/243 (43%), Gaps = 40/243 (16%)
Query: 18 SGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDGVFKL 77
S P SP S +PRSP G+PGS + ASP+EC IC S +D +FK
Sbjct: 23 SMPRSPSSAGSPRSP---------------GTPGSERV---ASPLECSICFSGYDNIFKT 64
Query: 78 PKRLDCGHVFCLECLARLSLAT---AGGGNAVACPVCRAPTRLAPRRGLPALPTQSGLLP 134
PK L C HVFCLECLARL+ A GG AV CP CR PT + P G PAL T L
Sbjct: 65 PKELSCTHVFCLECLARLAAAQPVGRPGGEAVPCPFCRQPTAVPP-AGAPALCTSRQL-- 121
Query: 135 RDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRK-------ARAPPPPPPLRLGRPLSR 187
AR P + L +P P PG + P PP P R
Sbjct: 122 -QARMPAHLRREEPVWLEGTKLCCQPLPTTPGREPGFVCVDVGLSKPAEPPAPARDPAPR 180
Query: 188 RLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSG-------PPRPQLVALA 240
R LA W LV+A L++ + + A +G PPRP + A
Sbjct: 181 RGRLAR-CWARCRDWRRMALVSALLLMLFCVALWPVQCALKTGNLRCLPLPPRPPATSTA 239
Query: 241 PAP 243
+P
Sbjct: 240 ASP 242
>gi|153252110 ring finger protein 183 [Homo sapiens]
Length = 192
Score = 68.9 bits (167), Expect = 6e-12
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 63 ECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPRRG 122
EC +C + F+ F PK LDC H FC+ECLA LSL T + CP+CR PT LA +
Sbjct: 12 ECPVCWNPFNNTFHTPKMLDCCHSFCVECLAHLSLVTP-ARRRLLCPLCRQPTVLASGQP 70
Query: 123 LPALPTQSGLL 133
+ LPT + +L
Sbjct: 71 VTDLPTDTAML 81
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 57.0 bits (136), Expect = 2e-08
Identities = 70/243 (28%), Positives = 88/243 (36%), Gaps = 68/243 (27%)
Query: 55 ILPPASPVECL----ICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPV 110
+ P A+P E +C+ + + KRL C H+F CL + CP
Sbjct: 275 LYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLR------SWFQRQQTCPT 328
Query: 111 CRA-------PTRLAPR-----RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYL 158
CR P + P +G P P LLP+ P +GLL
Sbjct: 329 CRMDVLRASLPAQSPPPPEPADQGPPPAPHPPPLLPQPPNFP------------QGLL-- 374
Query: 159 RPPPPPPG-----PRKARAPPPPPPLRLGR---PLSRRLSLASPAWVFNAAVALAVLVAA 210
PP PPG P PP PPP G P S +L+ P+ A AA
Sbjct: 375 --PPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAALSRPS-------GAATTTAA 425
Query: 211 GLVVSGVYIFFLIPHATSSGPPRPQLVALAPAPGFSWFPPRPPP--GSPWAP--AWTPRP 266
G + AT+SGP PAPGF P PPP G P P A+ P P
Sbjct: 426 GTSATAA-------SATASGPGSGSAPEAGPAPGF----PFPPPWMGMPLPPPFAFPPMP 474
Query: 267 TGP 269
P
Sbjct: 475 VPP 477
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 55.8 bits (133), Expect = 5e-08
Identities = 69/244 (28%), Positives = 88/244 (36%), Gaps = 69/244 (28%)
Query: 55 ILPPASPVECL----ICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPV 110
+ P A+P E +C+ + + KRL C H+F CL + CP
Sbjct: 275 LYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLR------SWFQRQQTCPT 328
Query: 111 CRA-------PTRLAPR-----RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYL 158
CR P + P +G P P LLP+ P +GLL
Sbjct: 329 CRMDVLRASLPAQSPPPPEPADQGPPPAPHPPPLLPQPPNFP------------QGLL-- 374
Query: 159 RPPPPPPG-----PRKARAPPPPPPLRLGR----PLSRRLSLASPAWVFNAAVALAVLVA 209
PP PPG P PP PPP G P + +L+ P+ A A
Sbjct: 375 --PPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAALSRPS-------GAATTTA 425
Query: 210 AGLVVSGVYIFFLIPHATSSGPPRPQLVALAPAPGFSWFPPRPPP--GSPWAP--AWTPR 265
AG + AT+SGP PAPGF P PPP G P P A+ P
Sbjct: 426 AGTSATAA-------SATASGPGSGSAPEAGPAPGF----PFPPPWMGMPLPPPFAFPPM 474
Query: 266 PTGP 269
P P
Sbjct: 475 PVPP 478
>gi|84993742 tripartite motif-containing 71 [Homo sapiens]
Length = 868
Score = 55.1 bits (131), Expect = 9e-08
Identities = 71/266 (26%), Positives = 89/266 (33%), Gaps = 56/266 (21%)
Query: 22 SPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDGVFKLPKRL 81
SP LS+ S S Q G G PG+ A + L C+
Sbjct: 21 SPAPLSSNSSASSSSSQTSTSSGGGGGGPGAA-----ARRLHVLPCL------------- 62
Query: 82 DCGHVFCLECLARLSLATAGGGNA-----VACPVCRAPTRLAPRRGLPALPTQSGLL--- 133
H FC CL L AGGG A + CPVC LA G+ ALP+ + LL
Sbjct: 63 ---HAFCRPCLEAHRLPAAGGGAAGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNL 119
Query: 134 ------------PRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLRL 181
P++ RA + R + P P +AP PP P R
Sbjct: 120 LDAVVATADEPPPKNGRAGAPAGAGGHSNHRHHAHHAHPRASASAPPLPQAPQPPAPSRS 179
Query: 182 --GRP-------LSRRLSLASPAWVFNAAVALAV----LVAAGLVVSGVYIFFLIPHATS 228
G P L RR S NAA + + + V + + H
Sbjct: 180 APGGPAASPSALLLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIE 239
Query: 229 SGPPRPQLVALAPAPGFSWFPPRPPP 254
GPP P A A G PP P P
Sbjct: 240 RGPPGPGAAAAAQQLGLG--PPFPGP 263
>gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4
[Homo sapiens]
Length = 456
Score = 54.3 bits (129), Expect = 1e-07
Identities = 52/160 (32%), Positives = 65/160 (40%), Gaps = 24/160 (15%)
Query: 160 PPPPPPGPRKARAPPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYI 219
PPPPPP P APPPP G P + L + + ++++ L + L SG
Sbjct: 7 PPPPPPPPPPLAAPPPPGASAKGPPARKLLFMCT------LSLSVTYLCYSLLGGSGSLQ 60
Query: 220 FFLI----PHATSSGPPRPQLVALAPAP---GFSWFPPRPPP------GSPWAPAWTPRP 266
F L P A + PP P +L P P G PP PPP G P P P
Sbjct: 61 FPLALQESPGAAAEPPPSPPPPSLLPTPVRLGAPSQPPAPPPLDNASHGEPPEPPEQPAA 120
Query: 267 TGPDLDTALP---GTAEDA-LEPEAGPEDPAEAERTLDRR 302
G D LP G A+DA L P + A+ L R
Sbjct: 121 PGTD-GWGLPSGGGGAQDAWLRTPLAPSEMITAQSALPER 159
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 52.0 bits (123), Expect = 7e-07
Identities = 44/130 (33%), Positives = 58/130 (44%), Gaps = 30/130 (23%)
Query: 160 PPPPPPGPRKARAPPPPPPLRLGRPLS--------RRLSLASPAW----VFNAAVAL--- 204
PPPPPP P PPPPPP L P S ++L++ASP +F+A L
Sbjct: 2406 PPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLETT 2465
Query: 205 AVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALAPA-------PGFSWFPPRPPPGSP 257
AVL + GL V+ + T++ PP P + P+ P S P P P P
Sbjct: 2466 AVLRSNGLPVTRI--------CTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIP 2517
Query: 258 WAPAWTPRPT 267
P T +PT
Sbjct: 2518 QLPTTTQKPT 2527
Score = 34.3 bits (77), Expect = 0.16
Identities = 62/284 (21%), Positives = 100/284 (35%), Gaps = 36/284 (12%)
Query: 63 ECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPT-RLAPRR 121
EC V S G P + CL C + +L GG+ P P + AP
Sbjct: 612 ECQTTVCSLCGFNPNPHLTEVKEWLCLNCQMKRAL----GGDLAPVPSSPQPKLKTAPVT 667
Query: 122 GLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPR-----KARAPPPP 176
A+ S P+ + P + + + D + +PPP P A+A PP
Sbjct: 668 TTSAVSKSS---PQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPP 724
Query: 177 PPLRLGRPLSRRLSLASPAWVFNAAVA------------LAVLVAAGLVVSGVYIFFLIP 224
L +P + + P+ A VA LV++ + I
Sbjct: 725 EADSLSKPAPPK-EPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKV 783
Query: 225 HATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDA-- 282
+ + P L + P S FPP SP+ PRP + PG + ++
Sbjct: 784 QSQAEEKTTPPLKTDSAKPSQS-FPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKG 842
Query: 283 ---LEPEAGPEDPAEAERTLDRRSDGTWGTEAGPGWAPWPRGAR 323
++P E+P +A+ + + D + P +P P G R
Sbjct: 843 QKQVDPVQKKEEPKKAQTKMSPKPD----AKPMPKGSPTPPGPR 882
Score = 33.1 bits (74), Expect = 0.35
Identities = 66/282 (23%), Positives = 90/282 (31%), Gaps = 40/282 (14%)
Query: 16 QGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDGVF 75
QG G P+S S + ++ + + G G P GP P +
Sbjct: 223 QGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHA------------ 270
Query: 76 KLPKRLDCGHVFCLECLARLSLATAGGGNAV--ACPVCRAPTRLAPRRGLPAL--PTQSG 131
KLP + D + A G +V + P P P G P P
Sbjct: 271 KLPLQRDASR-------PQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEK 323
Query: 132 LLPRDARAPPSRQGSVR-FDRRRGLLYLRPPPPPPGPRKARAPPPPPPLRLGRPLSRRLS 190
P A+ P G + ++ G ++PP PPG K PP PL +P +++
Sbjct: 324 SQPGPAKPPAQPSGLTKPLAQQPGT--VKPPVQPPGTTK----PPAQPLGPAKPPAQQTG 377
Query: 191 LASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALAPAPGFSWFPP 250
P+ ALA G P G P+P LA PG P
Sbjct: 378 SEKPSSEQPGPKALAQPPGVG-KTPAQQPGPAKPPTQQVGTPKP----LAQQPGLQ--SP 430
Query: 251 RPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDP 292
PG P P P A PG + GP P
Sbjct: 431 AKAPGPTKTPVQQPGPGKIPAQQAGPGKTS---AQQTGPTKP 469
Score = 29.6 bits (65), Expect = 3.9
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 19/88 (21%)
Query: 114 PTRLAPRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAP 173
P + P++ PA P P A+ P + GS + PPP PGP K
Sbjct: 476 PAKPPPQQPGPAKPPPQQ--PGSAKPPSQQPGSTK-----------PPPQQPGPAKPSPQ 522
Query: 174 PP----PPPLRLG--RPLSRRLSLASPA 195
P PP + G +P +++ S A P+
Sbjct: 523 QPGSTKPPSQQPGSAKPSAQQPSPAKPS 550
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 52.0 bits (123), Expect = 7e-07
Identities = 44/130 (33%), Positives = 58/130 (44%), Gaps = 30/130 (23%)
Query: 160 PPPPPPGPRKARAPPPPPPLRLGRPLS--------RRLSLASPAW----VFNAAVAL--- 204
PPPPPP P PPPPPP L P S ++L++ASP +F+A L
Sbjct: 2406 PPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPLFDAVTTLETT 2465
Query: 205 AVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALAPA-------PGFSWFPPRPPPGSP 257
AVL + GL V+ + T++ PP P + P+ P S P P P P
Sbjct: 2466 AVLRSNGLPVTRI--------CTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIP 2517
Query: 258 WAPAWTPRPT 267
P T +PT
Sbjct: 2518 QLPTTTQKPT 2527
Score = 34.3 bits (77), Expect = 0.16
Identities = 62/284 (21%), Positives = 100/284 (35%), Gaps = 36/284 (12%)
Query: 63 ECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPT-RLAPRR 121
EC V S G P + CL C + +L GG+ P P + AP
Sbjct: 612 ECQTTVCSLCGFNPNPHLTEVKEWLCLNCQMKRAL----GGDLAPVPSSPQPKLKTAPVT 667
Query: 122 GLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPR-----KARAPPPP 176
A+ S P+ + P + + + D + +PPP P A+A PP
Sbjct: 668 TTSAVSKSS---PQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPP 724
Query: 177 PPLRLGRPLSRRLSLASPAWVFNAAVA------------LAVLVAAGLVVSGVYIFFLIP 224
L +P + + P+ A VA LV++ + I
Sbjct: 725 EADSLSKPAPPK-EPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSSKV 783
Query: 225 HATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDA-- 282
+ + P L + P S FPP SP+ PRP + PG + ++
Sbjct: 784 QSQAEEKTTPPLKTDSAKPSQS-FPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKG 842
Query: 283 ---LEPEAGPEDPAEAERTLDRRSDGTWGTEAGPGWAPWPRGAR 323
++P E+P +A+ + + D + P +P P G R
Sbjct: 843 QKQVDPVQKKEEPKKAQTKMSPKPD----AKPMPKGSPTPPGPR 882
Score = 33.1 bits (74), Expect = 0.35
Identities = 66/282 (23%), Positives = 90/282 (31%), Gaps = 40/282 (14%)
Query: 16 QGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDGVF 75
QG G P+S S + ++ + + G G P GP P +
Sbjct: 223 QGPGRDPLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHA------------ 270
Query: 76 KLPKRLDCGHVFCLECLARLSLATAGGGNAV--ACPVCRAPTRLAPRRGLPAL--PTQSG 131
KLP + D + A G +V + P P P G P P
Sbjct: 271 KLPLQRDASR-------PQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEK 323
Query: 132 LLPRDARAPPSRQGSVR-FDRRRGLLYLRPPPPPPGPRKARAPPPPPPLRLGRPLSRRLS 190
P A+ P G + ++ G ++PP PPG K PP PL +P +++
Sbjct: 324 SQPGPAKPPAQPSGLTKPLAQQPGT--VKPPVQPPGTTK----PPAQPLGPAKPPAQQTG 377
Query: 191 LASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALAPAPGFSWFPP 250
P+ ALA G P G P+P LA PG P
Sbjct: 378 SEKPSSEQPGPKALAQPPGVG-KTPAQQPGPAKPPTQQVGTPKP----LAQQPGLQ--SP 430
Query: 251 RPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDP 292
PG P P P A PG + GP P
Sbjct: 431 AKAPGPTKTPVQQPGPGKIPAQQAGPGKTS---AQQTGPTKP 469
Score = 29.6 bits (65), Expect = 3.9
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 19/88 (21%)
Query: 114 PTRLAPRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAP 173
P + P++ PA P P A+ P + GS + PPP PGP K
Sbjct: 476 PAKPPPQQPGPAKPPPQQ--PGSAKPPSQQPGSTK-----------PPPQQPGPAKPSPQ 522
Query: 174 PP----PPPLRLG--RPLSRRLSLASPA 195
P PP + G +P +++ S A P+
Sbjct: 523 QPGSTKPPSQQPGSAKPSAQQPSPAKPS 550
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 50.8 bits (120), Expect = 2e-06
Identities = 30/70 (42%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 120 RRGLPALPTQSGLLPRDARAPPS--RQGSVRFDRRRGLLYLRPPPPPP-GPRKARAPPPP 176
R LP PT P +A P + R G+ RRR PPPPPP GP + PPPP
Sbjct: 3 RMKLPLKPTHPAEPPPEAEEPEADARPGAKAPSRRRRDCRPPPPPPPPAGPSRGPLPPPP 62
Query: 177 PPLRLGRPLS 186
PP LG P++
Sbjct: 63 PPRGLGPPVA 72
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.4 bits (119), Expect = 2e-06
Identities = 76/295 (25%), Positives = 100/295 (33%), Gaps = 47/295 (15%)
Query: 14 APQGSGPSSPGSLSAPRSPS------RGEDQEEEEEEEGDGSPGSGPILPPASPVECLIC 67
+P+G GP++P AP P+ +G + P + P P SP
Sbjct: 995 SPKG-GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAAT--- 1050
Query: 68 VSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAV----ACPVCRAPTRLAPRRGL 123
LPK +L + GG A P A T +P+ G
Sbjct: 1051 --------PLPKGAPT--------TPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGG- 1093
Query: 124 PALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPP---PPLR 180
PA P+ G A PPS +G + +G P PP P+ A PPP P
Sbjct: 1094 PATPSPKGAPMPPAATPPSPKGGLATPPHKG-APTTPAATPPSPKGGLATPPPKGAPTTP 1152
Query: 181 LGRPLSRRLSLAS--PAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVA 238
P S + LA+ P A GL P AT PP P+
Sbjct: 1153 AATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT---PPSPKGGL 1209
Query: 239 LAPAPGFSWFPPRPPPGSPWAPAWTPRPTG-PDLDTALPGTAEDALEPEAGPEDP 292
P+P + P P SP TP P G P A P + P+ GP P
Sbjct: 1210 ATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS------PKGGPATP 1258
Score = 47.8 bits (112), Expect = 1e-05
Identities = 77/294 (26%), Positives = 98/294 (33%), Gaps = 30/294 (10%)
Query: 15 PQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDGV 74
P + PS GS +A P GSP + P LP +P + S G
Sbjct: 1012 PAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATP-LPKGAPTTPAATLPSPKGG 1070
Query: 75 FKLPKRLDCGHVFCLECLARLSLATAG---GGNAV----ACPVCRAPTRLAPRRGLPALP 127
P L+ AT GG A P+ A T +P+ GL A P
Sbjct: 1071 PATPS---------LKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGL-ATP 1120
Query: 128 TQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPP---PPLRLGRP 184
G A PPS +G + +G P PP P+ A PPP P P
Sbjct: 1121 PHKGAPTTPAATPPSPKGGLATPPPKGAP-TTPAATPPSPKGGLATPPPKGAPTTPAATP 1179
Query: 185 LSRRLSLA--SPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALAPA 242
S + LA SP A GL P ++ PP P+ P+
Sbjct: 1180 PSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKG---APTTPAATPPSPKGGLATPS 1236
Query: 243 P-GFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDAL--EPEAGPEDPA 293
P G P PP PA P P A P + + L P G +PA
Sbjct: 1237 PKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPA 1290
Score = 42.4 bits (98), Expect = 6e-04
Identities = 79/307 (25%), Positives = 108/307 (35%), Gaps = 54/307 (17%)
Query: 18 SGPSSP-GSLSAPRSPSRGEDQEEEEE--EEGDGSPGSG----PILPPASPVECLICVSS 70
+GP +P G+LS+P SP E + SP + P P +P + S
Sbjct: 815 AGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLS 874
Query: 71 FDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPR----RGLPAL 126
GV PK V L + AT A A + + + A +G+PA
Sbjct: 875 PKGVTLPPKETPTPSVVNLP-FPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPAS 933
Query: 127 PTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPP---PPGPRKARAPPPP---PPLR 180
P+ G A PPS +G + P PP PP P+ A P P P
Sbjct: 934 PSPKGAPTPPAATPPSPKGGPATPSPK----WAPTPPAATPPSPKGGPATPSPKGAPTPP 989
Query: 181 LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALA 240
P S + A+P+ A AV + P + + P P+ +
Sbjct: 990 AATPPSPKGGPATPS-PKGAPTPPAVTPPS-------------PKGSPAATPFPKGASTP 1035
Query: 241 PAPGFSWFPPRP---------PPGSPWAPAWT-PRPTG----PDLDTALPGTAEDALEPE 286
PA PP P P G+P PA T P P G P L A A P+
Sbjct: 1036 PAA----TPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPK 1091
Query: 287 AGPEDPA 293
GP P+
Sbjct: 1092 GGPATPS 1098
Score = 41.2 bits (95), Expect = 0.001
Identities = 52/202 (25%), Positives = 67/202 (33%), Gaps = 43/202 (21%)
Query: 109 PVCRAPTRLAPRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPR 168
P A T +P+ GL A P+ G A PPS +G + +G P PP P+
Sbjct: 1195 PTTPAATPPSPKGGL-ATPSPKGAPTTPAATPPSPKGGLATPSPKGAP-TTPAATPPSPK 1252
Query: 169 KARAPPPP---PPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPH 225
A PPP P P S + LA+P G P+
Sbjct: 1253 GGPATPPPKGAPTPPAATPPSLKGGLATPPH------------------KGA------PN 1288
Query: 226 ATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTG-----------PDLDTA 274
PP P+ P + PP P SP TP P G P
Sbjct: 1289 PAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPT 1348
Query: 275 LPGTAEDALEPEAGPEDPAEAE 296
LP T + + GP P+ E
Sbjct: 1349 LPATTPSS---KGGPTTPSSKE 1367
Score = 34.3 bits (77), Expect = 0.16
Identities = 74/291 (25%), Positives = 105/291 (36%), Gaps = 56/291 (19%)
Query: 14 APQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVEC------LIC 67
AP+G GP++P S P P+ +E + S P PA+P +
Sbjct: 1451 APKG-GPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVI 1509
Query: 68 VSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPRRGLPALP 127
SS V P L++ + AT A+ P P +P++ PA+P
Sbjct: 1510 PSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVP---SPKK-TPAIP 1565
Query: 128 T--QSGLLP--RDARAPPSRQGSVRFDRRRGLLYLRPP------------PP---PPGPR 168
T ++ P ++A +PP+ S L PP PP PP P
Sbjct: 1566 TPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPE 1625
Query: 169 KARAPPPP------PPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFL 222
K A P P PP+ P S + S SPA V A + GL
Sbjct: 1626 KGPATPAPKGTPTSPPV---TPSSLKDSPTSPASVTCKMGATVPQASKGL---------- 1672
Query: 223 IPHATSSGPPRPQLVALAPAPGFS---WFPPRPPPGSPWAPAWTPRPTGPD 270
GP + V +APAP + P R P + + A +P P PD
Sbjct: 1673 ---PAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSP-PICPD 1719
Score = 33.9 bits (76), Expect = 0.20
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Query: 224 PHATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTG-PDLDTALPGTAEDA 282
P ++ PP P+ P+P ++ PP P SP TP P G P A P +
Sbjct: 940 PTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPS---- 995
Query: 283 LEPEAGPEDPAEAERTLDRRSDGTWGTEAGPGWAPWPRGA 322
P+ GP P+ + P P+P+GA
Sbjct: 996 --PKGGPATPSPKGAPTPPAVTPP-SPKGSPAATPFPKGA 1032
Score = 30.8 bits (68), Expect = 1.7
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 232 PRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPED 291
P+P+ +++ AP PP P AP+ P PT P LP + LE + P
Sbjct: 1783 PKPESASVSAAPS-------PPVSLPLAPS--PVPTLPPKQQFLPSSPGLVLESPSKPLA 1833
Query: 292 PAEAERTL 299
PA+ + L
Sbjct: 1834 PADEDELL 1841
Score = 29.6 bits (65), Expect = 3.9
Identities = 42/191 (21%), Positives = 65/191 (34%), Gaps = 48/191 (25%)
Query: 3 CPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPV 62
CP P S+ P + AP P + + + + ++ SP GP+ PP S
Sbjct: 1717 CPDPSAKNGSKGPLST------VAPAPLLPVQKDSSKTAKGKDASHSP-KGPLAPPESKA 1769
Query: 63 ECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPRRG 122
+ ++F+ V P+ + +A V+ P+ +P P +
Sbjct: 1770 STPLTAAAFEKVLPKPES---------------ASVSAAPSPPVSLPLAPSPVPTLPPK- 1813
Query: 123 LPALPTQSGLL---PRDARAPPSRQGSVRFDRRRGLLYLRPPPP-------------PPG 166
LP+ GL+ P AP LL L PP P P
Sbjct: 1814 QQFLPSSPGLVLESPSKPLAPADED---------ELLPLIPPEPISGGVPFQSVLVNMPT 1864
Query: 167 PRKARAPPPPP 177
P+ A P P P
Sbjct: 1865 PKSAGIPVPTP 1875
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 50.1 bits (118), Expect = 3e-06
Identities = 45/127 (35%), Positives = 55/127 (43%), Gaps = 9/127 (7%)
Query: 159 RPPPPPPGPRKARAPPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVY 218
+PPPPPP ++ + PPP P+S + A PA ++ A + AG G
Sbjct: 4 QPPPPPPQQQQQQQQLSPPPPAALAPVSGVVLPAPPAVSAGSSPAGSPGGGAGGEGLGAA 63
Query: 219 IFFLIPHATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGT 278
L+ H PP P A P P PP PPP S APA P P P L A PG
Sbjct: 64 AAALLLHPP---PPPPPATAAPPPPP----PPPPPPASAAAPASGP-PAPPGL-AAGPGP 114
Query: 279 AEDALEP 285
A A P
Sbjct: 115 AGGAPTP 121
Score = 44.7 bits (104), Expect = 1e-04
Identities = 30/68 (44%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 114 PTRLAPRRG--LPALPTQS-GLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKA 170
P LAP G LPA P S G P A +P G L L PPPPPP A
Sbjct: 24 PAALAPVSGVVLPAPPAVSAGSSP--AGSPGGGAGGEGLGAAAAALLLHPPPPPPPATAA 81
Query: 171 RAPPPPPP 178
PPPPPP
Sbjct: 82 PPPPPPPP 89
>gi|226442736 ring finger protein 222 [Homo sapiens]
Length = 220
Score = 49.7 bits (117), Expect = 4e-06
Identities = 47/178 (26%), Positives = 64/178 (35%), Gaps = 54/178 (30%)
Query: 45 EGDGSPGSGPILPPASPVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGG- 103
EG+ SG EC +C F + + L CGHVFC +CL + L+T G
Sbjct: 3 EGESKDSSGS--------ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQ 54
Query: 104 --NAVACPVCRAPTRLAPRR------------------GLPALPTQSGL---LPRDARAP 140
+ CP+CR T L+ + GLP++P L P A +P
Sbjct: 55 VQRTLVCPICRYVTFLSKKSSRWPSMLDKSSQTLAVPVGLPSVPPLDSLGHTNPLAASSP 114
Query: 141 PSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLRLGRPLSRRLSLASPAWVF 198
R PPPG + PP P PL SL + +F
Sbjct: 115 AWR-------------------PPPGQAR---PPGSPGQSAQLPLDLLPSLPRESQIF 150
>gi|239745703 PREDICTED: ring finger protein 222 [Homo sapiens]
Length = 220
Score = 49.7 bits (117), Expect = 4e-06
Identities = 47/178 (26%), Positives = 64/178 (35%), Gaps = 54/178 (30%)
Query: 45 EGDGSPGSGPILPPASPVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGG- 103
EG+ SG EC +C F + + L CGHVFC +CL + L+T G
Sbjct: 3 EGESKDSSGS--------ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQ 54
Query: 104 --NAVACPVCRAPTRLAPRR------------------GLPALPTQSGL---LPRDARAP 140
+ CP+CR T L+ + GLP++P L P A +P
Sbjct: 55 VQRTLVCPICRYVTFLSKKSSRWPSMLDKSSQTLAVPVGLPSVPPLDSLGHTNPLAASSP 114
Query: 141 PSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLRLGRPLSRRLSLASPAWVF 198
R PPPG + PP P PL SL + +F
Sbjct: 115 AWR-------------------PPPGQAR---PPGSPGQSAQLPLDLLPSLPRESQIF 150
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 49.7 bits (117), Expect = 4e-06
Identities = 76/295 (25%), Positives = 94/295 (31%), Gaps = 67/295 (22%)
Query: 2 PCPRPFWLRHSRA---------PQGSGPSS-----PGSLSAPRSPSRGEDQEEEEEE--- 44
P PRPF + S + P+G G P + R + ++EEEEEE
Sbjct: 619 PAPRPFPAQSSASGSFLLSGWDPEGRGAGETLAGDPAEVLGERGTAPWVEEEEEEEEGSS 678
Query: 45 --EGDGSPGSGPILPPASPVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGG 102
E S G GP P+ C +C G CL ++A GG
Sbjct: 679 PGEDSSSLGGGP--SRRGPLPCPLCSRE-------------GACSCLPLERGDAVAGWGG 723
Query: 103 GNAVACPVCRAPTRLAPRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPP 162
A+ CP P +L + G L APP+ D G P
Sbjct: 724 HPALGCP--------HPPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMGAA--APQY 773
Query: 163 PPPGPRKARAPPPPPPLRLGRPLS------------RRLSLASPAWVFNAAVALAVLVAA 210
P GP A PPPPPP P + LS P +
Sbjct: 774 PGRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPE 833
Query: 211 GLVVSGVYIFFLIPHATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPR 265
G G A G PRP+ P PG PRPPP P PR
Sbjct: 834 GAFPGG-------GAAEEEGVPRPRAPPEPPDPG----APRPPPDPGPLPLPGPR 877
Score = 33.9 bits (76), Expect = 0.20
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Query: 140 PPSRQGSVRFDRRRGLLYL------RPPPPPPGPRKARAPPPPPP 178
PP+++ S D + L YL RPPPPPP PR P P PP
Sbjct: 423 PPAQRPSAS-DLQLQLTYLLSERPPRPPPPPPPPRDGPFPWPWPP 466
Score = 31.2 bits (69), Expect = 1.3
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 5 RPFWLRHSRAPQGSGPSSPGSLSAPRSPSR-GEDQEEEEEE-EGDGSPGS-----GPILP 57
RP W A G+ G AP GED++E+EEE E +PG+ GP
Sbjct: 1279 RPPW---EGADAGAAGGEAGGAGAPGPAEEDGEDEDEDEEEDEEAAAPGAAAGPRGPGRA 1335
Query: 58 PASPVECLICVSSFD------GVFKLPKRLD 82
A+PV ++ + D G+ K P+ D
Sbjct: 1336 RAAPVPVVVSSADADAARPLRGLLKSPRGAD 1366
Score = 28.9 bits (63), Expect = 6.6
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 230 GPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAG 288
G PQ P P P PPP P APA P A PG+ + P+ G
Sbjct: 767 GAAAPQYPGRGPPPA-----PPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGPKPG 820
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 48.9 bits (115), Expect = 6e-06
Identities = 68/246 (27%), Positives = 85/246 (34%), Gaps = 47/246 (19%)
Query: 109 PVCRAPTRLAPRRGLPALPTQSGLL--------PRDARAPPSRQG---SVRFDRRRGLLY 157
P AP R P+ PA P Q G PRD P + + R R L
Sbjct: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFL 508
Query: 158 LRPPPPPPGPRKARAPPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGV 217
R PPP P + PPP + RP +R S +PA A GV
Sbjct: 509 GRAPPPRPAVEQ---PPPKVYVTRVRP-GQRASPRAPA-----------PRAPWPPFPGV 553
Query: 218 YIFFL-IPHATSSGPPRPQLVALAPAPGFSWFPPRPPP------GSPWAPAWTPRPTGPD 270
++ +P PPRP G PRPP G A T P P
Sbjct: 554 FLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPT 613
Query: 271 LDTAL-----PGTAEDALEPEAGPEDPAEAERTLDRRSDGTWGTE---------AGPGWA 316
+D+ L P T+ +L +GP+ P E E + DG G E AGP
Sbjct: 614 VDSNLSSEARPVTSFLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPALG 673
Query: 317 PWPRGA 322
W A
Sbjct: 674 RWREDA 679
Score = 29.3 bits (64), Expect = 5.0
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 22 SPGSLSAPRSPSRGEDQEEEEEEEGDGSPG 51
S +S P+ P GE EEEE E DG+PG
Sbjct: 630 SLSQVSGPQLPGEGE---EEEEGEDDGAPG 656
>gi|239756718 PREDICTED: ring finger protein 222 [Homo sapiens]
Length = 220
Score = 48.5 bits (114), Expect = 8e-06
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 45 EGDGSPGSGPILPPASPVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGG- 103
EG+ SG EC +C F + + L CGHVFC +CL + L+T G
Sbjct: 3 EGESKDSSGS--------ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQ 54
Query: 104 --NAVACPVCRAPTRLAPR 120
+ CP+CR T L+ +
Sbjct: 55 VQRTLVCPICRYVTFLSKK 73
>gi|239751213 PREDICTED: ring finger protein 222 [Homo sapiens]
Length = 220
Score = 48.5 bits (114), Expect = 8e-06
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 45 EGDGSPGSGPILPPASPVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGG- 103
EG+ SG EC +C F + + L CGHVFC +CL + L+T G
Sbjct: 3 EGESKDSSGS--------ECPVCYEKFRDLEGASRTLSCGHVFCHDCLVKYLLSTRVDGQ 54
Query: 104 --NAVACPVCRAPTRLAPR 120
+ CP+CR T L+ +
Sbjct: 55 VQRTLVCPICRYVTFLSKK 73
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 47.8 bits (112), Expect = 1e-05
Identities = 60/192 (31%), Positives = 67/192 (34%), Gaps = 64/192 (33%)
Query: 101 GGGNAVACPVCR-APTRLAPRRGLPALPT----QSGLLPRDARA------PPSRQGSVRF 149
GG AV + R AP P RG P P SG P AR PPSR +
Sbjct: 263 GGVEAVKNELRRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAA- 321
Query: 150 DRRRGLLYLRPPPPPPGPRKARAPPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVA 209
PPPPP R + A PPPPP R+ P PA
Sbjct: 322 -----------PPPPPPSRPSVAVPPPPPNRMYPP-------PPPA-------------- 349
Query: 210 AGLVVSGVYIFFLIPHATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTG- 268
+P + SGPP P L P PP PPP P P P P G
Sbjct: 350 -------------LPSSAPSGPPPPPPSVLGVGP---VAPPPPPPPPP--PPGPPPPPGL 391
Query: 269 -PDLDTALPGTA 279
D D +P TA
Sbjct: 392 PSDGDHQVPTTA 403
Score = 42.4 bits (98), Expect = 6e-04
Identities = 41/151 (27%), Positives = 48/151 (31%), Gaps = 46/151 (30%)
Query: 161 PPPPPGPRKARAPPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIF 220
PPPPP R PPPPPP G P +P + A
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRA------------------- 317
Query: 221 FLIPHATSSGPP--RPQLVALAPAPGFSWFPPRPP---------------------PGSP 257
P A PP RP VA+ P P +PP PP P +P
Sbjct: 318 ---PTAAPPPPPPSRPS-VAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAP 373
Query: 258 WAPAWTPRPTGPDLDTALPGTAEDALEPEAG 288
P P P GP LP + + AG
Sbjct: 374 PPPPPPPPPPGPPPPPGLPSDGDHQVPTTAG 404
Score = 38.9 bits (89), Expect = 0.006
Identities = 37/137 (27%), Positives = 46/137 (33%), Gaps = 56/137 (40%)
Query: 159 RPPPPPPGPRKARAPPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVY 218
R PPPP P + PPPPPP
Sbjct: 274 RQAPPPPPPSRGGPPPPPPP---------------------------------------- 293
Query: 219 IFFLIPHATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGT 278
PH +SGPP P PA G PP PP +P A P P+ P + A+P
Sbjct: 294 -----PH--NSGPPPP------PARGRG-APPPPPSRAPTAAPPPPPPSRPSV--AVPPP 337
Query: 279 AEDALEPEAGPEDPAEA 295
+ + P P P+ A
Sbjct: 338 PPNRMYPPPPPALPSSA 354
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 47.8 bits (112), Expect = 1e-05
Identities = 72/274 (26%), Positives = 98/274 (35%), Gaps = 40/274 (14%)
Query: 14 APQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSSFDG 73
+P SGPS+ G+ AP PS+ + + + +P P P+ SS
Sbjct: 251 SPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPL------SSSPL 304
Query: 74 VFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLAPRRGLPALPTQSGLL 133
P L+ A +L +++ C + P LAP P+ P L
Sbjct: 305 ATPSPSA-------ALQSQAPPTLPATPHSSSLTCQLA-TPLPLAPPS--PSAPPSLQTL 354
Query: 134 PRDARAPPSRQ----GSVRFDRRRGLLYLRP-----PPPPPGPRKARAPP---PPPPLRL 181
P PPS+ GS L P PPP P PP PP P
Sbjct: 355 PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSP--- 411
Query: 182 GRPLSRRLS-LASPAWVFNAAVALAVLVAA-----GLVVSGVYIFFLIPHATSSGPPRPQ 235
P S LS LA+P+ A+A+ +L A V + P + S P Q
Sbjct: 412 --PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQ 469
Query: 236 LVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGP 269
AP PP PP P +P+ TP P P
Sbjct: 470 APPSLAAPPLQ-VPPSPPASPPMSPSATPPPQAP 502
Score = 42.4 bits (98), Expect = 6e-04
Identities = 61/192 (31%), Positives = 76/192 (39%), Gaps = 40/192 (20%)
Query: 138 RAPPSRQGSVRFDRRRGLLYLRPPPPPP-----GPRK--ARAP-PPPPPLRLGRPLSRRL 189
+ PPS S R RPP P P GPR A AP PPPPP R S
Sbjct: 572 QVPPSPPASPTLQAPR-----RPPTPGPDTSVSGPRLTLALAPGPPPPPSR-----SPSS 621
Query: 190 SLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGPPRPQLVALAPAPGFSWFP 249
+L+ P +++ A + SG A +S PP +L A PA +W
Sbjct: 622 TLSGPDLAGHSSSATSTPEELRGYDSGPE-----GGAAASPPPDAELAACHPA---AWSR 673
Query: 250 PRPPP----GSPWAPAWTPRPTGPDLDTALPGTAED--ALEPEAGPEDPAEAERTLD-RR 302
PP G+P AP P TG PG+A+ + GPE A LD
Sbjct: 674 GPAPPLAFRGAPGAPLPWPPATG-------PGSADGLCTIYETEGPESATPAPGALDPGP 726
Query: 303 SDGTWGTEAGPG 314
S GT G +A G
Sbjct: 727 SPGTSGGKAAAG 738
Score = 36.2 bits (82), Expect = 0.041
Identities = 83/334 (24%), Positives = 105/334 (31%), Gaps = 44/334 (13%)
Query: 11 HSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPILPPASPVECLICVSS 70
HS P S P SP + P++P + SP P+ P+ + V
Sbjct: 378 HSFLP--SPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHL 435
Query: 71 FDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLA-PRRGLPALPTQ 129
F P F +S + A P +AP LA P +P P
Sbjct: 436 LQAPFSPPPSPPVQAPFSPPASPPVSPS--------ATPPSQAPPSLAAPPLQVPPSPPA 487
Query: 130 SGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAP----PPPPPLRLGR-P 184
S + A PP + L L PPP P A P P PP G+ P
Sbjct: 488 SPPMSPSATPPPQAPPPLAAPP----LQLAKPPPQAPPALATPPLQALPSPPASFPGQAP 543
Query: 185 LSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGP-PRPQLVALAPAP 243
S SL A VL A L V A P P P P
Sbjct: 544 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRL 603
Query: 244 GFSWFPPRPPPGSPWAPAWTPRPT--GPDL---DTALPGTAEDALEPEAGPEDPAEAERT 298
+ P PPP P+ +P T GPDL ++ T E+ ++GPE A A
Sbjct: 604 TLALAPGPPPP-----PSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPP 658
Query: 299 LDRR----SDGTWGTEAGPGWA---------PWP 319
D W P A PWP
Sbjct: 659 PDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWP 692
Score = 35.0 bits (79), Expect = 0.092
Identities = 52/182 (28%), Positives = 63/182 (34%), Gaps = 39/182 (21%)
Query: 134 PRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKA-------RAPPPPPPLR------ 180
P A A SR R RP PP GPRK+ P P R
Sbjct: 172 PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG 231
Query: 181 --LGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATS-SGPPRPQ-L 236
L RP SR LS ++A L+ +G G P A + P+P+ L
Sbjct: 232 GGLQRPASRSLS--------SSATPLSSPARSGPSARGT------PRAPAHPSQPKPKGL 277
Query: 237 VALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGPEDPAEAE 296
AL P P PP APA P + P L T P A + P P P +
Sbjct: 278 QALRP-------PQVTPPRKDAAPALGPLSSSP-LATPSPSAALQSQAPPTLPATPHSSS 329
Query: 297 RT 298
T
Sbjct: 330 LT 331
Score = 34.3 bits (77), Expect = 0.16
Identities = 28/110 (25%), Positives = 34/110 (30%), Gaps = 22/110 (20%)
Query: 161 PPPPPGPRKARAPPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIF 220
PP P P + P PP P SL SP + + F
Sbjct: 342 PPSPSAPPSLQTLPSPPATP---PSQATTSLGSPT------------------LQATHSF 380
Query: 221 FLIPHATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPD 270
P + P PQ P PP PP P +P TP P P+
Sbjct: 381 LPSPPLSPLATPPPQAPPALALPPLQ-APPSPPASPPLSPLATPSPQAPN 429
>gi|56605981 tripartite motif-containing 72 [Homo sapiens]
Length = 477
Score = 47.8 bits (112), Expect = 1e-05
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 62 VECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTR 116
+ C +C+ FD P +CGH FC CL R++ A G V CP C+APTR
Sbjct: 12 LSCPLCLQLFDA----PVTAECGHSFCRACLGRVAGEPAADG-TVLCPCCQAPTR 61
>gi|153791514 tripartite motif-containing 32 [Homo sapiens]
Length = 653
Score = 47.8 bits (112), Expect = 1e-05
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 62 VECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRL 117
+EC IC+ SF PK L CGH C +CL +L A N V CP C TR+
Sbjct: 18 LECPICMESFTEEQLRPKLLHCGHTICRQCLEKL---LASSINGVRCPFCSKITRI 70
>gi|153792582 tripartite motif-containing 32 [Homo sapiens]
Length = 653
Score = 47.8 bits (112), Expect = 1e-05
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 62 VECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRL 117
+EC IC+ SF PK L CGH C +CL +L A N V CP C TR+
Sbjct: 18 LECPICMESFTEEQLRPKLLHCGHTICRQCLEKL---LASSINGVRCPFCSKITRI 70
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 47.4 bits (111), Expect = 2e-05
Identities = 42/119 (35%), Positives = 46/119 (38%), Gaps = 14/119 (11%)
Query: 158 LRPPPPPPGPRKARAPPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGV 217
L PPPPPP P PPPPPPL P S S A +F + L A SG
Sbjct: 628 LPPPPPPPPPPPPPPPPPPPPL----PSQSAPSAGSAAPMFVKYSTITRLQNAS-QHSGA 682
Query: 218 YIFFLIPHATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPA-----WTPRPTGPDL 271
P S +PQ+ L P G PP PPP P P P P P L
Sbjct: 683 LFKPPTPPVMQSQSVKPQI--LVPPNGV--VPPPPPPPPPPTPGSAMAQLKPAPCAPSL 737
Score = 37.0 bits (84), Expect = 0.024
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 21/96 (21%)
Query: 109 PVCRAPTRLAPR-----RGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPP 163
P+ P +AP+ + P S +P PP + S+ F PPP
Sbjct: 882 PLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVF-----------PPP 930
Query: 164 PPGPRKARAPPPPP-----PLRLGRPLSRRLSLASP 194
PP P A PPPPP P + G P + +SP
Sbjct: 931 PPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSP 966
Score = 36.2 bits (82), Expect = 0.041
Identities = 46/155 (29%), Positives = 59/155 (38%), Gaps = 38/155 (24%)
Query: 113 APTRLAPRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPP-PPPPGPRKAR 171
A +L P P+LP S APP ++ + + + + PP PPPP P A
Sbjct: 724 AMAQLKPAPCAPSLPQFS--------APPP---PLKIHQVQHITQVAPPTPPPPPPIPAP 772
Query: 172 APPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVSGVYIFFLIPHATSSGP 231
PP PP +PL + PA VA V AA P T P
Sbjct: 773 LPPQAPP----KPL-----VTIPAPTSTKTVAPVVTQAAP------------PTPTPPVP 811
Query: 232 PRPQLVALAPAPGFSWFPPRPP-PGSPWAPAWTPR 265
P + PA S+ PP PP P P P P+
Sbjct: 812 PAKK----QPAFPASYIPPSPPTPPVPVPPPTLPK 842
Score = 34.3 bits (77), Expect = 0.16
Identities = 72/312 (23%), Positives = 96/312 (30%), Gaps = 55/312 (17%)
Query: 2 PCPRPFWLRHSRAPQGSGPSSPGSLSAPRSPSRGEDQEEEEEEEGDGSPGSGPI---LPP 58
P P P P PS P SAP P + + + P PI LPP
Sbjct: 717 PPPTPGSAMAQLKPAPCAPSLP-QFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPP 775
Query: 59 ASPVECLICVSSFDGVFKLPKRLDCGHVFCLECLARLSLATAGGGNAVACPVCRAPTRLA 118
+P + L+ + A S T A P P +
Sbjct: 776 QAPPKPLVTIP-----------------------APTSTKTVAPVVTQAAPPTPTPP-VP 811
Query: 119 PRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKAR--APPPP 176
P + PA P + +P PP P PPP P++ A PPP
Sbjct: 812 PAKKQPAFP--ASYIPPSPPTPPV-----------------PVPPPTLPKQQSFCAKPPP 852
Query: 177 PPLRLGRPLSRRLSLASPAWVFNAAVALAVL--VAAGLVVSGVYIFFLIPHATSSGPPRP 234
PL + ++++ P A+ L V A + P S P P
Sbjct: 853 SPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVP 912
Query: 235 QLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTG---PDLDTALPGTAEDALEPEAGPED 291
P P S P PPP AP P PT PD + PG G +
Sbjct: 913 SPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPD-KSGSPGKKTSKTSSPGGKKP 971
Query: 292 PAEAERTLDRRS 303
P +R +S
Sbjct: 972 PPTPQRNSSIKS 983
Score = 28.9 bits (63), Expect = 6.6
Identities = 42/187 (22%), Positives = 61/187 (32%), Gaps = 30/187 (16%)
Query: 109 PVCRAPTRLAPRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPP----- 163
P +PT + G P T P + PP+ Q + G + P P
Sbjct: 943 PPTASPT--PDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPSVDSL 1000
Query: 164 -----PPG----PRKARAPPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVV 214
PP P K PPP P + G+ ++L P + V+ V +G
Sbjct: 1001 VSKFTPPAESGSPSKETLPPPAAPPKPGKLNLSGVNL--PGVLQQGCVSAKAPVLSGRGK 1058
Query: 215 SGVYIFFLIPHATSSGPPRPQLVALAP------------APGFSWFPPRPPPGSPWAPAW 262
V F P + PP P+ P +P + P+P S +
Sbjct: 1059 DSVVEFPSPPSDSDFPPPPPETELPLPPIEIPAVFSGNTSPKVAVVNPQPQQWSKMSVKK 1118
Query: 263 TPRPTGP 269
P PT P
Sbjct: 1119 APPPTRP 1125
>gi|22027541 programmed cell death 7 [Homo sapiens]
Length = 485
Score = 47.0 bits (110), Expect = 2e-05
Identities = 40/119 (33%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 160 PPPPPPGPRKARAPPPP-PPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVS--- 215
PPP PP P PPPP P PL +R A LA+ A S
Sbjct: 15 PPPQPPPPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFLQPPLALQPRASAEASRGG 74
Query: 216 -GVYIFFLIPHATSSGPPRPQLVALAPAPGFSWF----PPRPPPGSPWAPAWTPRPTGP 269
G F+ +P PP PQ P PG PP P PG PW+P W P P
Sbjct: 75 GGAGAFYPVPPPPLPPPP-PQC---RPFPGTDAGERPRPPPPGPGPPWSPRWPEAPPPP 129
Score = 32.7 bits (73), Expect = 0.46
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Query: 230 GPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEAGP 289
GPP PQ P P + P PP SP P P+ GP PG + L+P
Sbjct: 13 GPPPPQ-----PPPPAPFGCPPPPLPSPAFPPPLPQRPGP-----FPGASAPFLQPPLAL 62
Query: 290 EDPAEAERTLDRRSDGTWGTEAGPGWAPWPRGARRLWGS 328
+ A AE + G + P P P R G+
Sbjct: 63 QPRASAEASRGGGGAGAFYPVPPPPLPPPPPQCRPFPGT 101
Score = 31.6 bits (70), Expect = 1.0
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 159 RPPPPPPGPRKARAP-----PPPPPLRLGRPLSRRL 189
RP PPPPGP +P PPPP LG +RL
Sbjct: 106 RPRPPPPGPGPPWSPRWPEAPPPPADVLGDAALQRL 141
Score = 31.2 bits (69), Expect = 1.3
Identities = 31/85 (36%), Positives = 32/85 (37%), Gaps = 15/85 (17%)
Query: 119 PRRGLPALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPP-PPGPRKAR------ 171
P P L L PR A A SR G G Y PPPP PP P + R
Sbjct: 49 PGASAPFLQPPLALQPR-ASAEASRGGG-----GAGAFYPVPPPPLPPPPPQCRPFPGTD 102
Query: 172 --APPPPPPLRLGRPLSRRLSLASP 194
P PPP G P S R A P
Sbjct: 103 AGERPRPPPPGPGPPWSPRWPEAPP 127
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 46.6 bits (109), Expect = 3e-05
Identities = 39/121 (32%), Positives = 42/121 (34%), Gaps = 29/121 (23%)
Query: 160 PPPPPPGP----RKARAPPPPPPLRLGRPLSRRLSLASPAWVFNAAVALAVLVAAGLVVS 215
PPPPPP P A PPPPPP L ++ L A P A+A
Sbjct: 421 PPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMA---------- 470
Query: 216 GVYIFFLIPHATSSGPPRPQLVAL-----APAPGFSWFPPRPP--PGSPWAPAWTPRPTG 268
P A PP P P PG PP PP PG W P P P
Sbjct: 471 --------PPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPPPPPLLPGMGWGPPPPPPPLL 522
Query: 269 P 269
P
Sbjct: 523 P 523
Score = 40.0 bits (92), Expect = 0.003
Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 10/59 (16%)
Query: 124 PALPTQSGLLPRDARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPRKARAPPPPPPLRLG 182
P LP + P PP GS F PPPPPP P PPPPPPL G
Sbjct: 461 PPLPGLGAMAPPAPPLPPPLPGSCEF---------LPPPPPPLPGLG-CPPPPPPLLPG 509
Score = 30.8 bits (68), Expect = 1.7
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 222 LIPHATSSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAE 280
L+P +++ PP P L P+ G P PPP P P P L LPG+ E
Sbjct: 429 LLPGSSAEPPPPPPPPPL-PSVGAKALPTAPPP-PPLPGLGAMAPPAPPLPPPLPGSCE 485
Score = 28.5 bits (62), Expect = 8.6
Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 228 SSGPPRPQLVALAPAPGFSWFPPRPPPGSPWAPAWTPRPTGPDLDTALPGTAEDALEPEA 287
+S PP P L P PP PPP P A PT P LPG A+ P A
Sbjct: 418 ASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGA-KALPTAPP-PPPLPGLG--AMAPPA 473
Query: 288 GPEDP 292
P P
Sbjct: 474 PPLPP 478
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.139 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,811,737
Number of Sequences: 37866
Number of extensions: 1679240
Number of successful extensions: 34997
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 1200
Number of HSP's that attempted gapping in prelim test: 17844
Number of HSP's gapped (non-prelim): 11562
length of query: 329
length of database: 18,247,518
effective HSP length: 103
effective length of query: 226
effective length of database: 14,347,320
effective search space: 3242494320
effective search space used: 3242494320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.