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Search of human proteins with 169204952
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169204952 PREDICTED: hypothetical protein [Homo sapiens]
(88 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169204952 PREDICTED: hypothetical protein [Homo sapiens] 197 2e-51
gi|169205491 PREDICTED: hypothetical protein [Homo sapiens] 186 3e-48
gi|169204438 PREDICTED: hypothetical protein [Homo sapiens] 186 3e-48
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 42 8e-05
gi|65508004 Wilms tumor 1 isoform D [Homo sapiens] 40 3e-04
gi|65507908 Wilms tumor 1 isoform C [Homo sapiens] 40 3e-04
gi|65507817 Wilms tumor 1 isoform B [Homo sapiens] 40 3e-04
gi|65507714 Wilms tumor 1 isoform A [Homo sapiens] 40 3e-04
gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 39 0.001
gi|47132519 Ras association and pleckstrin homology domains 1 is... 38 0.002
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 38 0.002
gi|251823730 cat eye syndrome chromosome region, candidate 6 iso... 37 0.003
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 37 0.003
gi|222144283 hypothetical protein LOC65998 [Homo sapiens] 37 0.003
gi|29788778 proline rich membrane anchor 1 precursor [Homo sapiens] 37 0.003
gi|15029506 homeobox D8 [Homo sapiens] 37 0.004
gi|150170670 piccolo isoform 2 [Homo sapiens] 37 0.004
gi|150378539 piccolo isoform 1 [Homo sapiens] 37 0.004
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 36 0.006
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 36 0.006
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens] 36 0.007
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens] 36 0.007
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ... 36 0.007
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens] 36 0.007
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 36 0.007
gi|4557329 fas ligand [Homo sapiens] 35 0.010
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 35 0.010
gi|119120861 formin-like 3 isoform 2 [Homo sapiens] 35 0.010
gi|119120874 formin-like 3 isoform 1 [Homo sapiens] 35 0.010
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 35 0.013
>gi|169204952 PREDICTED: hypothetical protein [Homo sapiens]
Length = 88
Score = 197 bits (500), Expect = 2e-51
Identities = 88/88 (100%), Positives = 88/88 (100%)
Query: 1 MTSRGEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLPPP 60
MTSRGEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLPPP
Sbjct: 1 MTSRGEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLPPP 60
Query: 61 PPPPPDRGIRRFPRQRNLRPQSQHLGGT 88
PPPPPDRGIRRFPRQRNLRPQSQHLGGT
Sbjct: 61 PPPPPDRGIRRFPRQRNLRPQSQHLGGT 88
>gi|169205491 PREDICTED: hypothetical protein [Homo sapiens]
Length = 86
Score = 186 bits (473), Expect = 3e-48
Identities = 86/88 (97%), Positives = 86/88 (97%), Gaps = 2/88 (2%)
Query: 1 MTSRGEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLPPP 60
MTSRGEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLP
Sbjct: 1 MTSRGEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLP-- 58
Query: 61 PPPPPDRGIRRFPRQRNLRPQSQHLGGT 88
PPPPPDRGIRRFPRQRNLRPQSQHLGGT
Sbjct: 59 PPPPPDRGIRRFPRQRNLRPQSQHLGGT 86
>gi|169204438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 86
Score = 186 bits (473), Expect = 3e-48
Identities = 86/88 (97%), Positives = 86/88 (97%), Gaps = 2/88 (2%)
Query: 1 MTSRGEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLPPP 60
MTSRGEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLP
Sbjct: 1 MTSRGEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLP-- 58
Query: 61 PPPPPDRGIRRFPRQRNLRPQSQHLGGT 88
PPPPPDRGIRRFPRQRNLRPQSQHLGGT
Sbjct: 59 PPPPPDRGIRRFPRQRNLRPQSQHLGGT 86
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 42.4 bits (98), Expect = 8e-05
Identities = 23/47 (48%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 26 ALDGPVGR------GHRRLGPGAQHCSRTGGLK-PSPPLPPPPPPPP 65
AL GP G G RR G ++ GL P PPLPPPPPPPP
Sbjct: 213 ALSGPSGEEGLSPGGKRRRGCNSEQTGLPPGLPLPPPPLPPPPPPPP 259
Score = 30.4 bits (67), Expect = 0.31
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 18/68 (26%)
Query: 35 HRRLGPGAQHCSRTG-----------GLKPSPPLPPPPP------PPPDRGIRRFPRQRN 77
H RLGP A H SR L P P PPPPP PPP + P R
Sbjct: 435 HGRLGPSA-HSSRKPFLGAPAATPHLSLPPGPSSPPPPPCPRLLRPPPPPAWLKGPACRA 493
Query: 78 LRPQSQHL 85
R + L
Sbjct: 494 AREDGEIL 501
Score = 29.3 bits (64), Expect = 0.70
Identities = 10/12 (83%), Positives = 10/12 (83%)
Query: 53 PSPPLPPPPPPP 64
PS P PPPPPPP
Sbjct: 787 PSQPQPPPPPPP 798
Score = 28.9 bits (63), Expect = 0.91
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 4/20 (20%)
Query: 52 KPSPPLPPPPP----PPPDR 67
KP P LPPPPP PPP +
Sbjct: 770 KPPPALPPPPPLAKFPPPSQ 789
Score = 26.9 bits (58), Expect = 3.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Query: 53 PSPPLPPPPPPPP 65
P P P PPPPPP
Sbjct: 785 PPPSQPQPPPPPP 797
Score = 25.8 bits (55), Expect = 7.7
Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 9/24 (37%)
Query: 51 LKPSPPLP---------PPPPPPP 65
L P PPL PPPPPPP
Sbjct: 775 LPPPPPLAKFPPPSQPQPPPPPPP 798
>gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]
Length = 517
Score = 40.4 bits (93), Expect = 3e-04
Identities = 18/44 (40%), Positives = 21/44 (47%)
Query: 40 PGAQHCSRTGGLKPSPPLPPPPPPPPDRGIRRFPRQRNLRPQSQ 83
PGA GG P P PPPPPPPP I++ P P +
Sbjct: 111 PGASAYGSLGGPAPPPAPPPPPPPPPHSFIKQEPSWGGAEPHEE 154
>gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]
Length = 500
Score = 40.4 bits (93), Expect = 3e-04
Identities = 18/44 (40%), Positives = 21/44 (47%)
Query: 40 PGAQHCSRTGGLKPSPPLPPPPPPPPDRGIRRFPRQRNLRPQSQ 83
PGA GG P P PPPPPPPP I++ P P +
Sbjct: 111 PGASAYGSLGGPAPPPAPPPPPPPPPHSFIKQEPSWGGAEPHEE 154
>gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]
Length = 514
Score = 40.4 bits (93), Expect = 3e-04
Identities = 18/44 (40%), Positives = 21/44 (47%)
Query: 40 PGAQHCSRTGGLKPSPPLPPPPPPPPDRGIRRFPRQRNLRPQSQ 83
PGA GG P P PPPPPPPP I++ P P +
Sbjct: 111 PGASAYGSLGGPAPPPAPPPPPPPPPHSFIKQEPSWGGAEPHEE 154
>gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]
Length = 497
Score = 40.4 bits (93), Expect = 3e-04
Identities = 18/44 (40%), Positives = 21/44 (47%)
Query: 40 PGAQHCSRTGGLKPSPPLPPPPPPPPDRGIRRFPRQRNLRPQSQ 83
PGA GG P P PPPPPPPP I++ P P +
Sbjct: 111 PGASAYGSLGGPAPPPAPPPPPPPPPHSFIKQEPSWGGAEPHEE 154
>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
Length = 1200
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 14 RSGFSSQLCYEEALDGPVGRGHRRLGPGAQ---HCSRTGGLK-----PSPPLPPPPPPPP 65
++ + +C +E + P GH R G + + + G K P PPLPPPPPPPP
Sbjct: 509 KNKLTCSICLKEFKNLPALNGHMRSHGGMRASPNLKQEEGEKVLPPQPQPPLPPPPPPPP 568
Score = 26.2 bits (56), Expect = 5.9
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 7/42 (16%)
Query: 51 LKPSPPLPPPPPPPPD-------RGIRRFPRQRNLRPQSQHL 85
++PS P PPP P +G + P+ +P QHL
Sbjct: 295 IRPSQPQPPPQQQQPQQLQLQQRQGSMQIPQYYQPQPMMQHL 336
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 37.7 bits (86), Expect = 0.002
Identities = 13/14 (92%), Positives = 14/14 (100%)
Query: 52 KPSPPLPPPPPPPP 65
+PSPPLPPPPPPPP
Sbjct: 623 QPSPPLPPPPPPPP 636
Score = 33.9 bits (76), Expect = 0.028
Identities = 12/15 (80%), Positives = 12/15 (80%)
Query: 51 LKPSPPLPPPPPPPP 65
L P PP PPPPPPPP
Sbjct: 628 LPPPPPPPPPPPPPP 642
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 631 PPPPPPPPPPPPP 643
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 632 PPPPPPPPPPPPP 644
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 633 PPPPPPPPPPPPP 645
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 634 PPPPPPPPPPPPP 646
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 635 PPPPPPPPPPPPP 647
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 636 PPPPPPPPPPPPP 648
Score = 32.3 bits (72), Expect = 0.082
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 627 PLPPPPPPPPPPP 639
Score = 29.3 bits (64), Expect = 0.70
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 53 PSPPLPPPPPPPPDR 67
P PP PPPPPP P +
Sbjct: 638 PPPPPPPPPPPLPSQ 652
Score = 28.9 bits (63), Expect = 0.91
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 50 GLKPSPPLPPPPPPP 64
G+ P PP PPPPP P
Sbjct: 707 GVVPPPPPPPPPPTP 721
Score = 28.9 bits (63), Expect = 0.91
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 56 PLPPPPPPPPDRG 68
P PPPPPPPP G
Sbjct: 710 PPPPPPPPPPTPG 722
Score = 28.9 bits (63), Expect = 0.91
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 51 LKPSPPLPPPPPPPP 65
+ PSPP PP P PPP
Sbjct: 824 IPPSPPTPPVPVPPP 838
Score = 28.1 bits (61), Expect = 1.5
Identities = 9/13 (69%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P+ +PPPPPPPP
Sbjct: 705 PNGVVPPPPPPPP 717
Score = 28.1 bits (61), Expect = 1.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P P+P PPPPPP
Sbjct: 931 PPSPVPAPPPPPP 943
Score = 28.1 bits (61), Expect = 1.5
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
PSP PPPPPPP
Sbjct: 932 PSPVPAPPPPPPP 944
Score = 27.7 bits (60), Expect = 2.0
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 54 SPPLPPPPPPPP 65
+PP PPPPPP P
Sbjct: 759 APPTPPPPPPIP 770
Score = 26.6 bits (57), Expect = 4.5
Identities = 9/13 (69%), Positives = 9/13 (69%)
Query: 53 PSPPLPPPPPPPP 65
P PP P P PPPP
Sbjct: 929 PPPPSPVPAPPPP 941
Score = 26.2 bits (56), Expect = 5.9
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
Query: 53 PSPPLPPPPP------PPP 65
PSP PPPPP PPP
Sbjct: 912 PSPDFPPPPPESSLVFPPP 930
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 37.7 bits (86), Expect = 0.002
Identities = 14/19 (73%), Positives = 14/19 (73%)
Query: 50 GLKPSPPLPPPPPPPPDRG 68
GL P PP PPPPPPPP G
Sbjct: 408 GLPPPPPPPPPPPPPPPAG 426
Score = 34.7 bits (78), Expect = 0.017
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 53 PSPPLPPPPPPPP 65
PSPP PPPPPPPP
Sbjct: 161 PSPPPPPPPPPPP 173
Score = 33.9 bits (76), Expect = 0.028
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 26 ALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLPP---PPPPPP 65
AL G G G G+ + P+PPLPP PPPPPP
Sbjct: 126 ALVAHPGAGSYPCGGGSSGAQPSAPPPPAPPLPPTPSPPPPPP 168
Score = 33.9 bits (76), Expect = 0.028
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 53 PSPPLPPPPPPPPDRGIR 70
P PP PPPPPPPP G +
Sbjct: 412 PPPPPPPPPPPPPAGGAK 429
Score = 26.6 bits (57), Expect = 4.5
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 7/35 (20%)
Query: 39 GPGAQHCSRTGGLKPSPPLPPPPPPPPDRGIRRFP 73
GP QH + PP PPPPP P + P
Sbjct: 348 GPHLQHHA-------PPPAPPPPPAPAQHPHQHHP 375
>gi|251823730 cat eye syndrome chromosome region, candidate 6
isoform b [Homo sapiens]
Length = 223
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 25 EALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLPPPPPPPPDRG 68
EAL+G RG+R A GG P PPPPPPPP G
Sbjct: 158 EALEGCWDRGNR-----ASPSRARGGYGAPPSAPPPPPPPPQGG 196
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 37.4 bits (85), Expect = 0.003
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 25 EALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLPPPPPPPPDRG 68
EAL+G RG+R A GG P PPPPPPPP G
Sbjct: 513 EALEGCWDRGNR-----ASPSRARGGYGAPPSAPPPPPPPPQGG 551
>gi|222144283 hypothetical protein LOC65998 [Homo sapiens]
Length = 678
Score = 37.0 bits (84), Expect = 0.003
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Query: 49 GGLKPSPPLPPPPPPPPDRGIRRFPRQRNLRPQ 81
GGL PP PPPPPPPP R ++RN +P+
Sbjct: 556 GGLALPPPPPPPPPPPP----RSREQRRNYQPR 584
>gi|29788778 proline rich membrane anchor 1 precursor [Homo
sapiens]
Length = 153
Score = 37.0 bits (84), Expect = 0.003
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 45 CSRTGGLKPSPPLPPPPPPPP 65
C +P PPLPPPPPPPP
Sbjct: 48 CRHVCQCRPPPPLPPPPPPPP 68
Score = 30.0 bits (66), Expect = 0.41
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 4 RGEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHCSRTGGLKPSPPLPPPPPP 63
RG W + + + G + ++ +H + P PP PPPPPP
Sbjct: 10 RGCCWSSLLLHCALHPLWGFVQVTHGEPQKSCSKVTDSCRHVCQCRPPPPLPPPPPPPPP 69
Query: 64 P 64
P
Sbjct: 70 P 70
>gi|15029506 homeobox D8 [Homo sapiens]
Length = 290
Score = 36.6 bits (83), Expect = 0.004
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 29 GPVGRGHRRLGPGA-QHCSRTGGLKPSPPLPPPPPPPPDRG 68
G GRG PG + P PP PPPPPPPP G
Sbjct: 85 GREGRGQEYFHPGGGSPAAAYQAAPPPPPHPPPPPPPPPCG 125
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 29 GPVGRGHRRLGPGAQHCSRTGGLKPSPPLPPPPPPPPDR-GIRRFPRQR--NLRPQSQHL 85
GP ++ GPG +TG KP LP P PPP + G + P Q+ + +P SQ
Sbjct: 445 GPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQP 504
Query: 86 GGT 88
G T
Sbjct: 505 GST 507
Score = 33.1 bits (74), Expect = 0.048
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 52 KPSPPLPPPPPPPP 65
+P PP PPPPPPPP
Sbjct: 2404 QPPPPPPPPPPPPP 2417
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2406 PPPPPPPPPPPPP 2418
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2407 PPPPPPPPPPPPP 2419
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2408 PPPPPPPPPPPPP 2420
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2409 PPPPPPPPPPPPP 2421
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2410 PPPPPPPPPPPPP 2422
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2411 PPPPPPPPPPPPP 2423
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2412 PPPPPPPPPPPPP 2424
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2413 PPPPPPPPPPPPP 2425
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2414 PPPPPPPPPPPPP 2426
Score = 30.8 bits (68), Expect = 0.24
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 51 LKPSPPLPPPPPPPP 65
+ PP PPPPPPPP
Sbjct: 2401 ISAQPPPPPPPPPPP 2415
Score = 28.9 bits (63), Expect = 0.91
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPP P
Sbjct: 2416 PPPPPPPPPPPLP 2428
Score = 28.9 bits (63), Expect = 0.91
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPP PP
Sbjct: 2417 PPPPPPPPPPLPP 2429
Score = 28.9 bits (63), Expect = 0.91
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPP PPP
Sbjct: 2418 PPPPPPPPPLPPP 2430
Score = 28.1 bits (61), Expect = 1.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 47 RTGGLKPSPPLPPPPPPPP 65
R+ L S PPPPPPPP
Sbjct: 2395 RSSSLDISAQPPPPPPPPP 2413
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 38 LGPGAQHCSRTGGLKPSPPLPPPPPPPPDRGIRRFPRQR--NLRPQSQHLG 86
LGP +TG KPS P P G+ + P Q+ +P +Q +G
Sbjct: 366 LGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVG 416
Score = 26.2 bits (56), Expect = 5.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Query: 53 PSPPLPPPPPPPP 65
P PPLPPP P P
Sbjct: 2423 PPPPLPPPTSPKP 2435
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 36.6 bits (83), Expect = 0.004
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 29 GPVGRGHRRLGPGAQHCSRTGGLKPSPPLPPPPPPPPDR-GIRRFPRQR--NLRPQSQHL 85
GP ++ GPG +TG KP LP P PPP + G + P Q+ + +P SQ
Sbjct: 445 GPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQP 504
Query: 86 GGT 88
G T
Sbjct: 505 GST 507
Score = 33.1 bits (74), Expect = 0.048
Identities = 11/14 (78%), Positives = 12/14 (85%)
Query: 52 KPSPPLPPPPPPPP 65
+P PP PPPPPPPP
Sbjct: 2404 QPPPPPPPPPPPPP 2417
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2406 PPPPPPPPPPPPP 2418
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2407 PPPPPPPPPPPPP 2419
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2408 PPPPPPPPPPPPP 2420
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2409 PPPPPPPPPPPPP 2421
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2410 PPPPPPPPPPPPP 2422
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2411 PPPPPPPPPPPPP 2423
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2412 PPPPPPPPPPPPP 2424
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2413 PPPPPPPPPPPPP 2425
Score = 32.7 bits (73), Expect = 0.063
Identities = 11/13 (84%), Positives = 11/13 (84%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPPPP
Sbjct: 2414 PPPPPPPPPPPPP 2426
Score = 30.8 bits (68), Expect = 0.24
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 51 LKPSPPLPPPPPPPP 65
+ PP PPPPPPPP
Sbjct: 2401 ISAQPPPPPPPPPPP 2415
Score = 28.9 bits (63), Expect = 0.91
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPPP P
Sbjct: 2416 PPPPPPPPPPPLP 2428
Score = 28.9 bits (63), Expect = 0.91
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPP PP
Sbjct: 2417 PPPPPPPPPPLPP 2429
Score = 28.9 bits (63), Expect = 0.91
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPP PPP
Sbjct: 2418 PPPPPPPPPLPPP 2430
Score = 28.1 bits (61), Expect = 1.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 47 RTGGLKPSPPLPPPPPPPP 65
R+ L S PPPPPPPP
Sbjct: 2395 RSSSLDISAQPPPPPPPPP 2413
Score = 27.7 bits (60), Expect = 2.0
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 38 LGPGAQHCSRTGGLKPSPPLPPPPPPPPDRGIRRFPRQR--NLRPQSQHLG 86
LGP +TG KPS P P G+ + P Q+ +P +Q +G
Sbjct: 366 LGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVG 416
Score = 26.2 bits (56), Expect = 5.9
Identities = 9/13 (69%), Positives = 9/13 (69%)
Query: 53 PSPPLPPPPPPPP 65
P PPLPPP P P
Sbjct: 2423 PPPPLPPPTSPKP 2435
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 36.2 bits (82), Expect = 0.006
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 53 PSPPLPPPPPPPPDRGIRRFPRQRNLRPQSQHLG 86
P PP PPPPPP P ++R P+ + + Q G
Sbjct: 139 PPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNG 172
Score = 25.8 bits (55), Expect = 7.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 52 KPSPPLPPPPPPPPD 66
+P P PP PPPPD
Sbjct: 178 QPRGPRTPPGPPPPD 192
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 36.2 bits (82), Expect = 0.006
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 53 PSPPLPPPPPPPPDRGIRRFPRQRNLRPQSQHLG 86
P PP PPPPPP P ++R P+ + + Q G
Sbjct: 139 PPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNG 172
Score = 25.8 bits (55), Expect = 7.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 52 KPSPPLPPPPPPPPD 66
+P P PP PPPPD
Sbjct: 178 QPRGPRTPPGPPPPD 192
>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 556
Score = 35.8 bits (81), Expect = 0.007
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 20/93 (21%)
Query: 5 GEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHC-----------SRTGGLKP 53
G WW ++G ++ C E + P +G RL P A H +R G +P
Sbjct: 396 GVWW---KGKAGRLAKRCGERH-EAPE-QGKPRLPPQAWHDQGRDAPPGPTPARRGLPRP 450
Query: 54 SPPLPPPPPPPPDRGIRRFPRQRNLRPQSQHLG 86
PP PPP PPPP RR P R +Q LG
Sbjct: 451 PPPPPPPLPPPP----RREPCHRAWPGPAQPLG 479
>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 35.8 bits (81), Expect = 0.007
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 20/93 (21%)
Query: 5 GEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHC-----------SRTGGLKP 53
G WW ++G ++ C E + P +G RL P A H +R G +P
Sbjct: 724 GVWW---KGKAGRLAKRCGERH-EAPE-QGKPRLPPQAWHDQGRDAPPGPTPARRGLPRP 778
Query: 54 SPPLPPPPPPPPDRGIRRFPRQRNLRPQSQHLG 86
PP PPP PPPP RR P R +Q LG
Sbjct: 779 PPPPPPPLPPPP----RREPCHRAWPGPAQPLG 807
>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
sapiens]
Length = 884
Score = 35.8 bits (81), Expect = 0.007
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 20/93 (21%)
Query: 5 GEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHC-----------SRTGGLKP 53
G WW ++G ++ C E + P +G RL P A H +R G +P
Sbjct: 724 GVWW---KGKAGRLAKRCGERH-EAPE-QGKPRLPPQAWHDQGRDAPPGPTPARRGLPRP 778
Query: 54 SPPLPPPPPPPPDRGIRRFPRQRNLRPQSQHLG 86
PP PPP PPPP RR P R +Q LG
Sbjct: 779 PPPPPPPLPPPP----RREPCHRAWPGPAQPLG 807
>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 35.8 bits (81), Expect = 0.007
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 20/93 (21%)
Query: 5 GEWWGLRMKRSGFSSQLCYEEALDGPVGRGHRRLGPGAQHC-----------SRTGGLKP 53
G WW ++G ++ C E + P +G RL P A H +R G +P
Sbjct: 724 GVWW---KGKAGRLAKRCGERH-EAPE-QGKPRLPPQAWHDQGRDAPPGPTPARRGLPRP 778
Query: 54 SPPLPPPPPPPPDRGIRRFPRQRNLRPQSQHLG 86
PP PPP PPPP RR P R +Q LG
Sbjct: 779 PPPPPPPLPPPP----RREPCHRAWPGPAQPLG 807
>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo
sapiens]
Length = 1584
Score = 35.8 bits (81), Expect = 0.007
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 48 TGGLKPSPPL--PPPPPPPPDRGIRRFPRQRNLRPQSQHLG 86
+GG +PP PPPPPPPP + P NL P LG
Sbjct: 1400 SGGPPEAPPAQPPPPPPPPPPPPQQPLPPPPNLEPAPPSLG 1440
>gi|4557329 fas ligand [Homo sapiens]
Length = 281
Score = 35.4 bits (80), Expect = 0.010
Identities = 12/13 (92%), Positives = 12/13 (92%)
Query: 53 PSPPLPPPPPPPP 65
P PPLPPPPPPPP
Sbjct: 50 PPPPLPPPPPPPP 62
Score = 32.0 bits (71), Expect = 0.11
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 47 RTGGLKPSPPLPPPPPPPP 65
R G +P PP PPPP PPP
Sbjct: 39 RPGQRRPPPPPPPPPLPPP 57
Score = 28.9 bits (63), Expect = 0.91
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPP PPPP
Sbjct: 46 PPPPPPPPLPPPP 58
Score = 28.5 bits (62), Expect = 1.2
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P PP PPPPP PP
Sbjct: 53 PLPPPPPPPPLPP 65
Score = 28.1 bits (61), Expect = 1.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 45 CSRTGGLKPSPPLPPPPPPPP 65
C + +P PPPPPPPP
Sbjct: 32 CPTSVPRRPGQRRPPPPPPPP 52
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 35.4 bits (80), Expect = 0.010
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 33 RGHRRLGPGAQHCSRTGGLKPSPPLPPPPPPPPDR-GIRRFP-----RQRNLRPQSQ 83
RG R P H P P PPPPPPPPD+ IR P ++R P+ Q
Sbjct: 60 RGRDRHSPPGCHLFPPPPPPPPPLPPPPPPPPPDKDDIRLLPSALGVKKRKRGPKKQ 116
>gi|119120861 formin-like 3 isoform 2 [Homo sapiens]
Length = 976
Score = 35.4 bits (80), Expect = 0.010
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 53 PSPPLPPPPPPPPDR 67
P+PPLPPPPPP PD+
Sbjct: 471 PAPPLPPPPPPLPDK 485
Score = 29.6 bits (65), Expect = 0.53
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P PP PP PPPPP
Sbjct: 468 PPPPAPPLPPPPP 480
>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
Length = 1027
Score = 35.4 bits (80), Expect = 0.010
Identities = 12/15 (80%), Positives = 14/15 (93%)
Query: 53 PSPPLPPPPPPPPDR 67
P+PPLPPPPPP PD+
Sbjct: 522 PAPPLPPPPPPLPDK 536
Score = 29.6 bits (65), Expect = 0.53
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 53 PSPPLPPPPPPPP 65
P PP PP PPPPP
Sbjct: 519 PPPPAPPLPPPPP 531
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 35.0 bits (79), Expect = 0.013
Identities = 13/19 (68%), Positives = 13/19 (68%)
Query: 50 GLKPSPPLPPPPPPPPDRG 68
G P PP PPPPPPPP G
Sbjct: 389 GGPPMPPPPPPPPPPPSSG 407
Score = 33.1 bits (74), Expect = 0.048
Identities = 24/65 (36%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Query: 30 PVGRGHRRLGPGAQHCSRTGGLKPSPP-------LPPPPPPPPDRGIRRFPRQRNLRPQS 82
P GRG P R+G L P PP PPPPPPPP P L P
Sbjct: 361 PPGRGGPP-PPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPPAL 419
Query: 83 QHLGG 87
GG
Sbjct: 420 VPAGG 424
Score = 30.0 bits (66), Expect = 0.41
Identities = 11/17 (64%), Positives = 12/17 (70%)
Query: 58 PPPPPPPPDRGIRRFPR 74
P PPPPPP RG + PR
Sbjct: 312 PLPPPPPPSRGGNQLPR 328
Score = 29.3 bits (64), Expect = 0.70
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 10/29 (34%)
Query: 50 GLKPSPPLP----------PPPPPPPDRG 68
G+ P PP P PPPPPPP G
Sbjct: 348 GIAPPPPTPRGPPPPGRGGPPPPPPPATG 376
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.142 0.486
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,314,870
Number of Sequences: 37866
Number of extensions: 466251
Number of successful extensions: 17202
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 330
Number of HSP's that attempted gapping in prelim test: 6769
Number of HSP's gapped (non-prelim): 6589
length of query: 88
length of database: 18,247,518
effective HSP length: 60
effective length of query: 28
effective length of database: 15,975,558
effective search space: 447315624
effective search space used: 447315624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.