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Search of human proteins with 166706897
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|166706897 olfactomedin 3 [Homo sapiens]
(458 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|166706897 olfactomedin 3 [Homo sapiens] 931 0.0
gi|17136143 olfactomedin related ER localized protein isoform 1 ... 622 e-178
gi|17157993 olfactomedin 2 [Homo sapiens] 588 e-168
gi|4557779 myocilin [Homo sapiens] 201 9e-52
gi|163792198 latrophilin 3 precursor [Homo sapiens] 201 1e-51
gi|6912464 latrophilin 2 precursor [Homo sapiens] 192 4e-49
gi|46195719 olfactomedin-like 2B [Homo sapiens] 190 2e-48
gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens] 186 3e-47
gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens] 185 7e-47
gi|116014339 olfactomedin-like 2A [Homo sapiens] 165 7e-41
gi|32313593 olfactomedin 4 precursor [Homo sapiens] 154 1e-37
gi|5453547 olfactomedin related ER localized protein isoform 2 [... 151 1e-36
gi|9910270 olfactomedin-like 3 [Homo sapiens] 127 2e-29
gi|98986321 gliomedin [Homo sapiens] 120 3e-27
gi|38348264 olfactomedin-like 1 [Homo sapiens] 114 2e-25
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 41 0.003
gi|42794779 myosin 18A isoform b [Homo sapiens] 40 0.004
gi|28416946 myosin 18A isoform a [Homo sapiens] 40 0.004
gi|39930343 transmembrane and coiled-coil domain family 1 isofor... 39 0.008
gi|190014612 transmembrane and coiled-coil domain family 1 isofo... 39 0.008
gi|190014610 transmembrane and coiled-coil domain family 1 isofo... 39 0.008
gi|71061468 centromere protein E [Homo sapiens] 39 0.010
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 38 0.017
gi|54792740 transmembrane and coiled-coil domain family 2 [Homo ... 37 0.029
gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens] 37 0.029
gi|83715968 sarcoma antigen NY-SAR-79 [Homo sapiens] 37 0.037
gi|16262452 cingulin [Homo sapiens] 36 0.083
gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens] 36 0.083
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens] 36 0.083
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens] 36 0.083
>gi|166706897 olfactomedin 3 [Homo sapiens]
Length = 458
Score = 931 bits (2405), Expect = 0.0
Identities = 458/458 (100%), Positives = 458/458 (100%)
Query: 1 MQATSNLLNLLLLSLFAGLDPSKTQISPKEGWQVYSSAQDPDGRCICTVVAPEQNLCSRD 60
MQATSNLLNLLLLSLFAGLDPSKTQISPKEGWQVYSSAQDPDGRCICTVVAPEQNLCSRD
Sbjct: 1 MQATSNLLNLLLLSLFAGLDPSKTQISPKEGWQVYSSAQDPDGRCICTVVAPEQNLCSRD 60
Query: 61 AKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMT 120
AKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMT
Sbjct: 61 AKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMT 120
Query: 121 KHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEELH 180
KHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEELH
Sbjct: 121 KHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEELH 180
Query: 181 QRVLSLETRLRDCMKKLTCGKLMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSY 240
QRVLSLETRLRDCMKKLTCGKLMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSY
Sbjct: 181 QRVLSLETRLRDCMKKLTCGKLMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSY 240
Query: 241 TNNKIVREYKSIADFVSGAESRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMG 300
TNNKIVREYKSIADFVSGAESRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMG
Sbjct: 241 TNNKIVREYKSIADFVSGAESRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMG 300
Query: 301 RVLAQRSLEYAGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLE 360
RVLAQRSLEYAGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLE
Sbjct: 301 RVLAQRSLEYAGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLE 360
Query: 361 VMKSWSTGYPKRSAGESFMICGTLYVTNSHLTGAKVYYSYSTKTSTYEYTDIPFHNQYFH 420
VMKSWSTGYPKRSAGESFMICGTLYVTNSHLTGAKVYYSYSTKTSTYEYTDIPFHNQYFH
Sbjct: 361 VMKSWSTGYPKRSAGESFMICGTLYVTNSHLTGAKVYYSYSTKTSTYEYTDIPFHNQYFH 420
Query: 421 ISMLDYNARDRALYAWNNGHQVLFNVTLFHIIKTEDDT 458
ISMLDYNARDRALYAWNNGHQVLFNVTLFHIIKTEDDT
Sbjct: 421 ISMLDYNARDRALYAWNNGHQVLFNVTLFHIIKTEDDT 458
>gi|17136143 olfactomedin related ER localized protein isoform 1
[Homo sapiens]
Length = 467
Score = 622 bits (1604), Expect = e-178
Identities = 292/456 (64%), Positives = 365/456 (80%)
Query: 1 MQATSNLLNLLLLSLFAGLDPSKTQISPKEGWQVYSSAQDPDGRCICTVVAPEQNLCSRD 60
M LL+LL L L +P+E WQVYSSAQD +GRCICTVVAP+Q +CSRD
Sbjct: 11 MHPARKLLSLLFLILMGTELTQVLPTNPEESWQVYSSAQDSEGRCICTVVAPQQTMCSRD 70
Query: 61 AKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMT 120
A+++QLRQLLEKVQNMSQSIEVL+ RTQRD QYV KME QMKGL++KF+Q+E+ K +
Sbjct: 71 ARTKQLRQLLEKVQNMSQSIEVLDRRTQRDLQYVEKMENQMKGLESKFKQVEESHKQHLA 130
Query: 121 KHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEELH 180
+ F+ +K KMDEL PLIPVLE+YK DAKL+ QFKEE++NL++VL +QEEIGAYDY+EL
Sbjct: 131 RQFKAIKAKMDELRPLIPVLEEYKADAKLVLQFKEEVQNLTSVLNELQEEIGAYDYDELQ 190
Query: 181 QRVLSLETRLRDCMKKLTCGKLMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSY 240
RV +LE RLR CM+KL CGKL I+ PVTVKTSG+RFG+WMTDPLA E +NRVWYMD Y
Sbjct: 191 SRVSNLEERLRACMQKLACGKLTGISDPVTVKTSGSRFGSWMTDPLAPEGDNRVWYMDGY 250
Query: 241 TNNKIVREYKSIADFVSGAESRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMG 300
NN+ VREYKS+ DF++ ++ LP W+GT VVYNGS+YFNK+QS+III++
Sbjct: 251 HNNRFVREYKSMVDFMNTDNFTSHRLPHPWSGTGQVVYNGSIYFNKFQSHIIIRFDLKTE 310
Query: 301 RVLAQRSLEYAGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLE 360
+L RSL+YAG++N+Y Y WGG SDIDLM DE GLWAVYATNQNAGNIV+S+L+ +L+
Sbjct: 311 TILKTRSLDYAGYNNMYHYAWGGHSDIDLMVDESGLWAVYATNQNAGNIVVSRLDPVSLQ 370
Query: 361 VMKSWSTGYPKRSAGESFMICGTLYVTNSHLTGAKVYYSYSTKTSTYEYTDIPFHNQYFH 420
+++W+T YPKRSAGE+F+ICGTLYVTN + G KV+Y+Y T STYEY DIPF N+Y H
Sbjct: 371 TLQTWNTSYPKRSAGEAFIICGTLYVTNGYSGGTKVHYAYQTNASTYEYIDIPFQNKYSH 430
Query: 421 ISMLDYNARDRALYAWNNGHQVLFNVTLFHIIKTED 456
ISMLDYN +DRALYAWNNGHQ+L+NVTLFH+I++++
Sbjct: 431 ISMLDYNPKDRALYAWNNGHQILYNVTLFHVIRSDE 466
>gi|17157993 olfactomedin 2 [Homo sapiens]
Length = 454
Score = 588 bits (1517), Expect = e-168
Identities = 278/447 (62%), Positives = 343/447 (76%), Gaps = 3/447 (0%)
Query: 11 LLLSLFAGLDPSKTQISPKEGWQVYSSAQDPDGRCICTVVAPEQNLCSRDAKSRQLRQLL 70
LLL L +GL +P+EGWQ+Y+SAQ PDG+CICT V P Q+ CSRD +SR+LRQL+
Sbjct: 10 LLLLLCSGLAGQTLFQNPEEGWQLYTSAQAPDGKCICTAVIPAQSTCSRDGRSRELRQLM 69
Query: 71 EKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMTKHFQELKEKM 130
EKVQN+SQS+EVL LRT RD QYV MET M+ L A+ R + +L K FQELK++M
Sbjct: 70 EKVQNVSQSMEVLELRTYRDLQYVRGMETLMRSLDARLRAADG---SLSAKSFQELKDRM 126
Query: 131 DELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEELHQRVLSLETRL 190
ELLPL VLEQYK D + I + +EE+RNLS L IQEE+GAY YE+L QRV++LE RL
Sbjct: 127 TELLPLSSVLEQYKADTRTIVRLREEVRNLSGSLAAIQEEMGAYGYEDLQQRVMALEARL 186
Query: 191 RDCMKKLTCGKLMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYK 250
C +KL CGKL ++ P+TV+ G+RFG+WMTD +A ++RVWYMD Y + V E++
Sbjct: 187 HACAQKLGCGKLTGVSNPITVRAMGSRFGSWMTDTMAPSADSRVWYMDGYYKGRRVLEFR 246
Query: 251 SIADFVSGAESRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMGRVLAQRSLEY 310
++ DF+ G + LP WAGT HVVYNGSL++NKYQSN+++KY F VL QRSL
Sbjct: 247 TLGDFIKGQNFIQHLLPQPWAGTGHVVYNGSLFYNKYQSNVVVKYHFRSRSVLVQRSLPG 306
Query: 311 AGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYP 370
AG++N +PY+WGGFSD+D M DE GLWAVY TNQNAGNIV+S+L+ TLEVM+SW TGYP
Sbjct: 307 AGYNNTFPYSWGGFSDMDFMVDESGLWAVYTTNQNAGNIVVSRLDPHTLEVMRSWDTGYP 366
Query: 371 KRSAGESFMICGTLYVTNSHLTGAKVYYSYSTKTSTYEYTDIPFHNQYFHISMLDYNARD 430
KRSAGE+FMICG LYVTNSHL GAKVY++Y T TS+YEYTD+PFHNQY HISMLDYN R+
Sbjct: 367 KRSAGEAFMICGVLYVTNSHLAGAKVYFAYFTNTSSYEYTDVPFHNQYSHISMLDYNPRE 426
Query: 431 RALYAWNNGHQVLFNVTLFHIIKTEDD 457
RALY WNNGHQVL+NVTLFH+I T D
Sbjct: 427 RALYTWNNGHQVLYNVTLFHVISTSGD 453
>gi|4557779 myocilin [Homo sapiens]
Length = 504
Score = 201 bits (512), Expect = 9e-52
Identities = 144/467 (30%), Positives = 235/467 (50%), Gaps = 61/467 (13%)
Query: 38 AQDPDGRCICT--VVAPEQNLC-------------SRDAKSRQLRQLLEKVQNMSQSIEV 82
A D GRC T V +P ++ C RD+ +++L LE + S+E
Sbjct: 40 ANDQSGRCQYTFSVASPNESSCPEQSQAMSVIHNLQRDSSTQRLD--LEATKARLSSLES 97
Query: 83 LNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMTKHFQELKEKMDELLPLIPVLEQ 142
L + D Q ETQ +GL+ + + +R L T+ +EL+ LL VLE+
Sbjct: 98 LLHQLTLD-QAARPQETQ-EGLQRELGTLRRERDQLETQT-RELETAYSNLLRDKSVLEE 154
Query: 143 YKTD--------AKLITQFKEEIRNLS------------AVLTGIQE----EIGAYDYEE 178
K A+ + +E+ L AV G +E + ++E
Sbjct: 155 EKKRLRQENENLARRLESSSQEVARLRRGQCPQTRDTARAVPPGSREVSTWNLDTLAFQE 214
Query: 179 LHQRVLSLETR----------LRDCMKKLTCGKLMKITGPVTVKTSGT---RFGAWMTDP 225
L + + LR CG+L+ + P+T++T+ T ++G WM DP
Sbjct: 215 LKSELTEVPASRILKESPSGYLRSGEGDTGCGELVWVGEPLTLRTAETITGKYGVWMRDP 274
Query: 226 LASEKNNR--VWYMDSY-TNNKIVREYKSIADFVSGAESRTYNLPFKWAGTNHVVYNGSL 282
+ + W +D+ T+ + V EY I+ F+ G S+ + LP T VVY+GSL
Sbjct: 275 KPTYPYTQETTWRIDTVGTDVRQVFEYDLISQFMQGYPSKVHILPRPLESTGAVVYSGSL 334
Query: 283 YFNKYQSNIIIKYSFDMGRVLAQRSLEYAGFHNVYPYTWGGFSDIDLMADEIGLWAVYAT 342
YF +S +I+Y + V A++ + AG+H +PY+WGG++DIDL DE GLW +Y+T
Sbjct: 335 YFQGAESRTVIRYELNTETVKAEKEIPGAGYHGQFPYSWGGYTDIDLAVDEAGLWVIYST 394
Query: 343 NQNAGNIVISQLNQDTLEVMKSWSTGYPKRSAGESFMICGTLYVTNSHLTG-AKVYYSYS 401
++ G IV+S+LN + LE+ ++W T K+S +F+ICGTLY +S+ + A V ++Y
Sbjct: 395 DEAKGAIVLSKLNPENLELEQTWETNIRKQSVANAFIICGTLYTVSSYTSADATVNFAYD 454
Query: 402 TKTSTYEYTDIPFHNQYFHISMLDYNARDRALYAWNNGHQVLFNVTL 448
T T + IPF N+Y + SM+DYN ++ L+AW+N + V +++ L
Sbjct: 455 TGTGISKTLTIPFKNRYKYSSMIDYNPLEKKLFAWDNLNMVTYDIKL 501
>gi|163792198 latrophilin 3 precursor [Homo sapiens]
Length = 1469
Score = 201 bits (510), Expect = 1e-51
Identities = 113/285 (39%), Positives = 156/285 (54%), Gaps = 17/285 (5%)
Query: 172 GAYDYEELHQRVLSLETRLRDCMKKLTCGKLMK-ITGPVTVKTSGTRFGAWMTDPLASEK 230
G Y Y E+ + + K C L+K + + S + GAW DPL +
Sbjct: 112 GTYKYLEVQYECVPYKVE----QKVFLCPGLLKGVYQSEHLFESDHQSGAWCKDPL--QA 165
Query: 231 NNRVWYMD--SYTNNKIVREYKSIADFVSGAESRTYNLPFKWAGTNHVVYNGSLYFNKYQ 288
+++++YM Y + + EY S DF++G + TY LP + GT VVY+G+L+FNK +
Sbjct: 166 SDKIYYMPWTPYRTDTLT-EYSSKDDFIAGRPTTTYKLPHRVDGTGFVVYDGALFFNKER 224
Query: 289 SNIIIKYSFDMGRVLAQRSLEYAGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGN 348
+ I+K+ + + A +H+ PY WGG SDIDL DE GLW +YAT QN G
Sbjct: 225 TRNIVKFDLRTRIKSGEAIIANANYHDTSPYRWGGKSDIDLAVDENGLWVIYATEQNNGK 284
Query: 349 IVISQLNQDTLEVMKSWSTGYPKRSAGESFMICGTLYVTNS-------HLTGAKVYYSYS 401
IVISQLN TL + +W T Y KRSA +FMICG LYV S TG K+ Y Y+
Sbjct: 285 IVISQLNPYTLRIEGTWDTAYDKRSASNAFMICGILYVVKSVYEDDDNEATGNKIDYIYN 344
Query: 402 TKTSTYEYTDIPFHNQYFHISMLDYNARDRALYAWNNGHQVLFNV 446
T S D+PF N Y +I+ +DYN RD LY WNN H V +++
Sbjct: 345 TDQSKDSLVDVPFPNSYQYIAAVDYNPRDNLLYVWNNYHVVKYSL 389
>gi|6912464 latrophilin 2 precursor [Homo sapiens]
Length = 1403
Score = 192 bits (489), Expect = 4e-49
Identities = 102/248 (41%), Positives = 144/248 (58%), Gaps = 12/248 (4%)
Query: 200 GKLMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMD--SYTNNKIVREYKSIADFVS 257
G L I + + + GAW DPL + +++++M Y + ++ EY S+ DF +
Sbjct: 138 GTLKAIVDSPCIYEAEQKAGAWCKDPLQAA--DKIYFMPWTPYRTDTLI-EYASLEDFQN 194
Query: 258 GAESRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMGRVLAQRSLEYAGFHNVY 317
++ TY LP + GT VVY+G+++FNK ++ I+K+ + + YA +H+
Sbjct: 195 SRQTTTYKLPNRVDGTGFVVYDGAVFFNKERTRNIVKFDLRTRIKSGEAIINYANYHDTS 254
Query: 318 PYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYPKRSAGES 377
PY WGG +DIDL DE GLW +YAT QN G IVISQLN TL +W T Y KR+A +
Sbjct: 255 PYRWGGKTDIDLAVDENGLWVIYATEQNNGMIVISQLNPYTLRFEATWETVYDKRAASNA 314
Query: 378 FMICGTLYVT------NSHLTGA-KVYYSYSTKTSTYEYTDIPFHNQYFHISMLDYNARD 430
FMICG LYV N TG + Y Y+T+ + EY D+PF NQY +I+ +DYN RD
Sbjct: 315 FMICGVLYVVRSVYQDNESETGKNSIDYIYNTRLNRGEYVDVPFPNQYQYIAAVDYNPRD 374
Query: 431 RALYAWNN 438
LY WNN
Sbjct: 375 NQLYVWNN 382
>gi|46195719 olfactomedin-like 2B [Homo sapiens]
Length = 750
Score = 190 bits (483), Expect = 2e-48
Identities = 100/252 (39%), Positives = 141/252 (55%), Gaps = 10/252 (3%)
Query: 202 LMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYKSIADFVSGAES 261
L ITGP T T G GAWM DPLA K+ R++ + Y N +V E++++ +F G S
Sbjct: 498 LSTITGPTTQNTYGRNEGAWMKDPLA--KDERIYVTNYYYGNTLV-EFRNLENFKQGRWS 554
Query: 262 RTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMGRVLAQRSLEYAGFHNVYPYTW 321
+Y LP+ W GT HVVYNG+ Y+N+ + IIKY V A L + P+ W
Sbjct: 555 NSYKLPYSWIGTGHVVYNGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRW 614
Query: 322 GGFSDIDLMADEIGLWAVYATNQNAG----NIVISQLNQDTLEVMK--SWSTGYPKRSAG 375
G SD+D DE GLW +Y + G IV+S+LN L K +W TG + G
Sbjct: 615 QGHSDVDFAVDENGLWLIYPALDDEGFSQEVIVLSKLNAADLSTQKETTWRTGLRRNFYG 674
Query: 376 ESFMICGTLYVTNSH-LTGAKVYYSYSTKTSTYEYTDIPFHNQYFHISMLDYNARDRALY 434
F+ICG LY +S+ A + Y++ T T+T + F N+Y + + +DYN +DR LY
Sbjct: 675 NCFVICGVLYAVDSYNQRNANISYAFDTHTNTQIVPRLLFENEYSYTTQIDYNPKDRLLY 734
Query: 435 AWNNGHQVLFNV 446
AW+NGHQV ++V
Sbjct: 735 AWDNGHQVTYHV 746
Score = 31.6 bits (70), Expect = 1.6
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 45 CICTVVAPEQ--NLCSRDAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMK 102
C C VAP N C D + ++LR+ + +S I++L +LK+ +
Sbjct: 114 CKCACVAPPSALNPCEGDFRLQKLREADSQDLKLSTIIDMLEGAFYG--LDLLKLHSVTT 171
Query: 103 GLKAKFRQIEDDRKTLMTKHFQELKEKMDEL 133
L + ++E++ +TK +++KE M+E+
Sbjct: 172 KLVGRVDKLEEEVSKNLTKENEQIKEDMEEI 202
>gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]
Length = 1474
Score = 186 bits (473), Expect = 3e-47
Identities = 105/285 (36%), Positives = 151/285 (52%), Gaps = 17/285 (5%)
Query: 172 GAYDYEELHQRVLSLETRLRDCMKKLTC-GKLMKITGPVTVKTSGTRFGAWMTDPLASEK 230
G Y Y E+ + + K C G L K+ P + S + GAW DPL +
Sbjct: 117 GTYKYLEVQYDCVPYKVE----QKVFVCPGTLQKVLEPTSTHESEHQSGAWCKDPL--QA 170
Query: 231 NNRVWYMD--SYTNNKIVREYKSIADFVSGAESRTYNLPFKWAGTNHVVYNGSLYFNKYQ 288
+R++ M Y + + EY S D+V+ + TY LP + GT VVY+G++++NK +
Sbjct: 171 GDRIYVMPWIPYRTDTLT-EYASWEDYVAARHTTTYRLPNRVDGTGFVVYDGAVFYNKER 229
Query: 289 SNIIIKYSFDMGRVLAQRSLEYAGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGN 348
+ I+KY + + A +H+ PY WGG +DIDL DE GLW +YAT N G
Sbjct: 230 TRNIVKYDLRTRIKSGETVINTANYHDTSPYRWGGKTDIDLAVDENGLWVIYATEGNNGR 289
Query: 349 IVISQLNQDTLEVMKSWSTGYPKRSAGESFMICGTLYV-------TNSHLTGAKVYYSYS 401
+V+SQLN TL +W TGY KRSA +FM+CG LYV +S G +V Y+++
Sbjct: 290 LVVSQLNPYTLRFEGTWETGYDKRSASNAFMVCGVLYVLRSVYVDDDSEAAGNRVDYAFN 349
Query: 402 TKTSTYEYTDIPFHNQYFHISMLDYNARDRALYAWNNGHQVLFNV 446
T + E + F N Y IS +DYN RD LY WNN V +++
Sbjct: 350 TNANREEPVSLTFPNPYQFISSVDYNPRDNQLYVWNNYFVVRYSL 394
>gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]
Length = 1469
Score = 185 bits (470), Expect = 7e-47
Identities = 99/256 (38%), Positives = 142/256 (55%), Gaps = 12/256 (4%)
Query: 200 GKLMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMD--SYTNNKIVREYKSIADFVS 257
G L K+ P + S + GAW DPL + +R++ M Y + + EY S D+V+
Sbjct: 137 GTLQKVLEPTSTHESEHQSGAWCKDPL--QAGDRIYVMPWIPYRTDTLT-EYASWEDYVA 193
Query: 258 GAESRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMGRVLAQRSLEYAGFHNVY 317
+ TY LP + GT VVY+G++++NK ++ I+KY + + A +H+
Sbjct: 194 ARHTTTYRLPNRVDGTGFVVYDGAVFYNKERTRNIVKYDLRTRIKSGETVINTANYHDTS 253
Query: 318 PYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYPKRSAGES 377
PY WGG +DIDL DE GLW +YAT N G +V+SQLN TL +W TGY KRSA +
Sbjct: 254 PYRWGGKTDIDLAVDENGLWVIYATEGNNGRLVVSQLNPYTLRFEGTWETGYDKRSASNA 313
Query: 378 FMICGTLYV-------TNSHLTGAKVYYSYSTKTSTYEYTDIPFHNQYFHISMLDYNARD 430
FM+CG LYV +S G +V Y+++T + E + F N Y IS +DYN RD
Sbjct: 314 FMVCGVLYVLRSVYVDDDSEAAGNRVDYAFNTNANREEPVSLTFPNPYQFISSVDYNPRD 373
Query: 431 RALYAWNNGHQVLFNV 446
LY WNN V +++
Sbjct: 374 NQLYVWNNYFVVRYSL 389
>gi|116014339 olfactomedin-like 2A [Homo sapiens]
Length = 652
Score = 165 bits (418), Expect = 7e-41
Identities = 87/255 (34%), Positives = 138/255 (54%), Gaps = 11/255 (4%)
Query: 200 GKLMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYKSIADFVSGA 259
G L + PV + G GAWM DP A +++R++ + Y N +V E++++ +F G
Sbjct: 397 GTLRAVDPPVRHHSYGRHEGAWMKDPAA--RDDRIYVTNYYYGNSLV-EFRNLENFKQGR 453
Query: 260 ESRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMGRVLAQRSLEYAGFHNVYPY 319
S Y LP+ W GT HVVY G+ Y+N+ + IIKY V + L + + P+
Sbjct: 454 WSNMYKLPYNWIGTGHVVYQGAFYYNRAFTKNIIKYDLRQRFVASWALLPDVVYEDTTPW 513
Query: 320 TWGGFSDIDLMADEIGLWAVYATNQNAGN-----IVISQLNQDTLEVMK--SWSTGYPKR 372
W G SDID DE GLW +Y + IV+S+L+ L V + +W T +
Sbjct: 514 KWRGHSDIDFAVDESGLWVIYPAVDDRDEAQPEVIVLSRLDPGDLSVHRETTWKTRLRRN 573
Query: 373 SAGESFMICGTLYVTNSH-LTGAKVYYSYSTKTSTYEYTDIPFHNQYFHISMLDYNARDR 431
S G F++CG LY +++ +V Y++ T T T +PF N++ + + +DYN ++R
Sbjct: 574 SYGNCFLVCGILYAVDTYNQQEGQVAYAFDTHTGTDARPQLPFLNEHAYTTQIDYNPKER 633
Query: 432 ALYAWNNGHQVLFNV 446
LYAW+NGHQ+ + +
Sbjct: 634 VLYAWDNGHQLTYTL 648
Score = 33.1 bits (74), Expect = 0.54
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 32 WQVYSSAQDPDGRCICTVVAPEQNLCSRDAKSRQLRQL---LEKVQNMSQSIE--VLNLR 86
+ V + + D RC CT N C + K +L++ L K+Q+M +E + ++
Sbjct: 75 YTVETVSSGTDCRCSCTAPPSSLNPCENEWKMEKLKKQAPELLKLQSMVDLLEGTLYSMD 134
Query: 87 TQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMTKHFQELKEKMDELLPLIPVLEQYKTD 146
+ YV K+ +QM L E+ K +++ + +K D + L L Y+
Sbjct: 135 LMKVHAYVHKVASQMNTL-------EESIKANLSRENEVVK---DSVRHLSEQLRHYENH 184
Query: 147 AKLITQFKEEIRNLSAVL 164
+ ++ K+E+ L L
Sbjct: 185 SAIMLGIKKELSRLGLQL 202
>gi|32313593 olfactomedin 4 precursor [Homo sapiens]
Length = 510
Score = 154 bits (390), Expect = 1e-37
Identities = 107/440 (24%), Positives = 209/440 (47%), Gaps = 33/440 (7%)
Query: 35 YSSAQDPDGRCICTVVAPEQNLCSRDAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYV 94
++ + D G C C+V P+ ++ +L +SQ E + + Q +
Sbjct: 73 FTGSVDDRGTCQCSVSLPDTTF-----PVDRVERLEFTAHVLSQKFEKELSKVREYVQLI 127
Query: 95 LKMETQMKGLKAKFRQIEDDRKTLMTKHFQELKEKMDELLPLIPVL-EQYKTDAKLITQF 153
E ++ L + +E D + F+ +K ++ E+ L+ L E + ++++ Q
Sbjct: 128 SVYEKKLLNLTVRIDIMEKDTISYTELDFELIKVEVKEMEKLVIQLKESFGGSSEIVDQL 187
Query: 154 KEEIRNLSAVLTGIQEEIGAYDYEELHQRVLSLETRLRDCMKKL--------------TC 199
+ EIRN++ ++ + E + + + + +++L+T+L++C +C
Sbjct: 188 EVEIRNMTLLVEKL-ETLDKNNVLAIRREIVALKTKLKECEASKDQNTPVVHPPPTPGSC 246
Query: 200 GK--LMKITGPVTVKTSGTRF----GAWMTDPLASEKNNRV-WYMDSYTNNKIV---REY 249
G ++ I+ P V+ + F GAW D N + W T+ +++ R Y
Sbjct: 247 GHGGVVNISKPSVVQLNWRGFSYLYGAWGRDYSPQHPNKGLYWVAPLNTDGRLLEYYRLY 306
Query: 250 KSIADFVSGAESRTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMGRVLAQRSLE 309
++ D + +R + + G+ VYN ++Y N Y + I + + + ++L
Sbjct: 307 NTLDDLLLYINARELRITYG-QGSGTAVYNNNMYVNMYNTGNIARVNLTTNTIAVTQTLP 365
Query: 310 YAGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGY 369
A ++N + Y + DID DE GLW +Y+T + GN+VIS+LN TL+V+ +W T
Sbjct: 366 NAAYNNRFSYANVAWQDIDFAVDENGLWVIYSTEASTGNMVISKLNDTTLQVLNTWYTKQ 425
Query: 370 PKRSAGESFMICGTLYVTNSHLTGA-KVYYSYSTKTSTYEYTDIPFHNQYFHISMLDYNA 428
K SA +FM+CG LY T + T +++Y Y T T DI H + ++YN
Sbjct: 426 YKPSASNAFMVCGVLYATRTMNTRTEEIFYYYDTNTGKEGKLDIVMHKMQEKVQSINYNP 485
Query: 429 RDRALYAWNNGHQVLFNVTL 448
D+ LY +N+G+ + +++++
Sbjct: 486 FDQKLYVYNDGYLLNYDLSV 505
>gi|5453547 olfactomedin related ER localized protein isoform 2
[Homo sapiens]
Length = 135
Score = 151 bits (382), Expect = 1e-36
Identities = 75/124 (60%), Positives = 93/124 (75%)
Query: 1 MQATSNLLNLLLLSLFAGLDPSKTQISPKEGWQVYSSAQDPDGRCICTVVAPEQNLCSRD 60
M LL+LL L L +P+E WQVYSSAQD +GRCICTVVAP+Q +CSRD
Sbjct: 11 MHPARKLLSLLFLILMGTELTQVLPTNPEESWQVYSSAQDSEGRCICTVVAPQQTMCSRD 70
Query: 61 AKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMT 120
A+++QLRQLLEKVQNMSQSIEVL+ RTQRD QYV KME QMKGL++KF+Q+E+ K +
Sbjct: 71 ARTKQLRQLLEKVQNMSQSIEVLDRRTQRDLQYVEKMENQMKGLESKFKQVEESHKQHLA 130
Query: 121 KHFQ 124
+ F+
Sbjct: 131 RQFK 134
>gi|9910270 olfactomedin-like 3 [Homo sapiens]
Length = 406
Score = 127 bits (320), Expect = 2e-29
Identities = 101/382 (26%), Positives = 178/382 (46%), Gaps = 42/382 (10%)
Query: 97 METQMKGLKAKFRQIEDDRKTLMTKHFQELKEKMDELLPLIPVLEQ----YKTDAKLITQ 152
ME ++ L+ + Q +D ++H EL++ +++LPL+ V E+ +T+A I+
Sbjct: 30 MERRLAALEERLAQCQDQS----SRHAAELRDFKNKMLPLLEVAEKEREALRTEADTISG 85
Query: 153 FKEEIRNLSAVLTGIQEEIGAYDYEEL---------HQRVLSLETRLRDCMKKLTCGKLM 203
+ + L + +++E R + DC ++ + M
Sbjct: 86 RVDRLEREVDYLETQNPALPCVEFDEKVTGGPGTKGKGRRNEKYDMVTDCGYTISQVRSM 145
Query: 204 KITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYKSIADFVSGAESRT 263
KI +K G G W DPL + +++ +D T N + + DF +R
Sbjct: 146 KI-----LKRFGGPAGLWTKDPLG--QTEKIYVLDG-TQNDTAFVFPRLRDFTLAMAARK 197
Query: 264 YN---LPFKWAGTNHVVYNGSLYFNKY----------QSNIIIKYSFDMGRVLAQRSLEY 310
+ +PF W GT +VY G LYF + N + F + S +
Sbjct: 198 ASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEMENTLQLIKFHLANRTVVDSSVF 257
Query: 311 AGFHNVYPYTWGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYP 370
+ PY + IDL ADE GLWAVYAT ++ ++ +++L+ TL+ + W T P
Sbjct: 258 PAEGLIPPYGLTADTYIDLAADEEGLWAVYATREDDRHLCLAKLDPQTLDTEQQWDTPCP 317
Query: 371 KRSAGESFMICGTLYV--TNSHLTGAKVYYSY-STKTSTYEYTDIP-FHNQYFHISMLDY 426
+ +A +F+ICGTLYV + A++ S+ ++ T T E +P F +Y + L Y
Sbjct: 318 RENAEAAFVICGTLYVVYNTRPASRARIQCSFDASGTLTPERAALPYFPRRYGAHASLRY 377
Query: 427 NARDRALYAWNNGHQVLFNVTL 448
N R+R LYAW++G+Q+++ + +
Sbjct: 378 NPRERQLYAWDDGYQIVYKLEM 399
>gi|98986321 gliomedin [Homo sapiens]
Length = 551
Score = 120 bits (301), Expect = 3e-27
Identities = 73/246 (29%), Positives = 135/246 (54%), Gaps = 8/246 (3%)
Query: 202 LMKITGPVTVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYKSIADFVSGAES 261
+ I PV V FG W+ + A++ ++R+W + ++ +V+E+K ++G+ +
Sbjct: 304 ITSIGNPVQVLKVTETFGTWIRES-ANKSDDRIWVTEHFSGI-MVKEFKDQPSLLNGSYT 361
Query: 262 RTYNLPFKWAGTNHVVYNGSLYFNKYQSNIIIKYSFDMGRVLAQR-SLEYAGFHNVYPYT 320
+ LP+ + G HVVYN SLY++K SN ++++ F G+ +Q LE A + +
Sbjct: 362 FIH-LPYYFHGCGHVVYNNSLYYHKGGSNTLVRFEF--GQETSQTLKLENALYFDRKYLF 418
Query: 321 WGGFSDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYPKRSAGESFMI 380
+ +L DE GLW +YA++ + +I+++QL++ T V++ +T YPK AG +F+
Sbjct: 419 ANSKTYFNLAVDEKGLWIIYASSVDGSSILVAQLDERTFSVVQHVNTTYPKSKAGNAFIA 478
Query: 381 CGTLYVTNSHLTGAKVYYSYSTKTSTYEYTDIPFHNQYFHISMLDYNARDRALYAWNNGH 440
G LYVT++ +V +++ + ++ML YN RD+ LY+W +GH
Sbjct: 479 RGILYVTDT--KDMRVTFAFDLLGGKQINANFDLRTSQSVLAMLAYNMRDQHLYSWEDGH 536
Query: 441 QVLFNV 446
+L+ V
Sbjct: 537 LMLYPV 542
>gi|38348264 olfactomedin-like 1 [Homo sapiens]
Length = 402
Score = 114 bits (284), Expect = 2e-25
Identities = 101/368 (27%), Positives = 161/368 (43%), Gaps = 40/368 (10%)
Query: 107 KFRQIED--DRKTLMTK-HFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAV 163
+FR +E ++ T T+ + QE +E + ++ + Y ++ +K + NL+
Sbjct: 38 RFRVLEQGLEKCTQATRAYIQEFQEFSKNISVMLGRCQTYTSE------YKSAVGNLALR 91
Query: 164 LTGIQEEIGAYDY---------------EELHQRVLSLETRLRDCMKKLTCGKLMKITGP 208
+ Q EI Y E+ + E ++R + LM I
Sbjct: 92 VERAQREIDYIQYLREADECIVSEDKTLAEMLLQEAEEEKKIRTLLNASCDNMLMGIKSL 151
Query: 209 VTVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYKSIADFVSGAES---RTYN 265
VK G+WM D + N+ Y+ + N V E+ +I F+ R
Sbjct: 152 KIVKKMMDTHGSWMKDAVY---NSPKVYLLIGSRNNTVWEFANIRAFMEDNTKPAPRKQI 208
Query: 266 LPFKWAGTNHVVYNGSLYF-NKYQSNIIIKYSFDMGRVLAQRSLEYAGFHNVYPYTWGGF 324
L W GT V+Y G L+F N+ SN IIKY+ R + R L G Y
Sbjct: 209 LTLSWQGTGQVIYKGFLFFHNQATSNEIIKYNLQK-RTVEDRMLLPGGVGRALVYQHSPS 267
Query: 325 SDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYPKRSAGESFMICGTL 384
+ IDL DE GLWA+++ ++V++++ TL V SW T + A SF++CG L
Sbjct: 268 TYIDLAVDEHGLWAIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDAEASFLLCGVL 327
Query: 385 YVTNSHLTGAKVYYSYS---TKTSTYEYTDIP---FHNQYFHISMLDYNARDRALYAWNN 438
YV S TG + + + T D+P F + SM+ YN RD+ LYAWN
Sbjct: 328 YVVYS--TGGQGPHRITCIYDPLGTISEEDLPNLFFPKRPRSHSMIHYNPRDKQLYAWNE 385
Query: 439 GHQVLFNV 446
G+Q+++ +
Sbjct: 386 GNQIIYKL 393
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 40.8 bits (94), Expect = 0.003
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 64 RQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMTKHF 123
RQ+R+L K+ M + E L+ Q + K+E + K L+ + + RK L+ K
Sbjct: 272 RQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLL-KER 330
Query: 124 QELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEELHQRV 183
Q+L EK++E E +T+ K + ++E R ++ + QE Y + +
Sbjct: 331 QKLLEKIEE-----KQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGSQF 385
Query: 184 LSLETRLRDCMKKL 197
S E R + K+L
Sbjct: 386 TSKEERDKWIKKEL 399
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 40.0 bits (92), Expect = 0.004
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 12/162 (7%)
Query: 66 LRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAK-FRQIEDDRKTL--MTKH 122
L + L ++Q I+ Q D ++K ++ QI D + L K
Sbjct: 1730 LEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKE 1789
Query: 123 FQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEELHQR 182
QEL+EK+ L + LEQ D L+++ + +IR L L + ++ +R
Sbjct: 1790 KQELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQV---------KR 1840
Query: 183 VLSLETRLRDCMKKLTCGKLMKITGPVTVKTSGTRFGAWMTD 224
+ SL +RL++ M+KLT + +I K R + D
Sbjct: 1841 LESLASRLKENMEKLTEERDQRIAAENREKEQNKRLQRQLRD 1882
Score = 30.4 bits (67), Expect = 3.5
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Query: 32 WQVYSSAQDPDGRCICTVVAPEQNLCSRDAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDF 91
W+++++ R + V E+ + ++D + +QLR LEK + + + + R +
Sbjct: 1237 WKLFTTV-----RPLIEVQLSEEQIRNKDEEIQQLRSKLEKAEKERNELRLNSDRLESRI 1291
Query: 92 QYVLKMETQMKGLKAKFRQI---EDDRKTLMTKHFQELKEKMDELLPLIPVLEQYKTDAK 148
+ T + Q+ E + K +EL+ + D L + V+E +A+
Sbjct: 1292 SELTSELTDERNTGESASQLLDAETAERLRAEKEMKELQTQYDALKKQMEVMEMEVMEAR 1351
Query: 149 LI 150
LI
Sbjct: 1352 LI 1353
>gi|28416946 myosin 18A isoform a [Homo sapiens]
Length = 2054
Score = 40.0 bits (92), Expect = 0.004
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 12/162 (7%)
Query: 66 LRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAK-FRQIEDDRKTL--MTKH 122
L + L ++Q I+ Q D ++K ++ QI D + L K
Sbjct: 1730 LEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKE 1789
Query: 123 FQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEELHQR 182
QEL+EK+ L + LEQ D L+++ + +IR L L + ++ +R
Sbjct: 1790 KQELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQV---------KR 1840
Query: 183 VLSLETRLRDCMKKLTCGKLMKITGPVTVKTSGTRFGAWMTD 224
+ SL +RL++ M+KLT + +I K R + D
Sbjct: 1841 LESLASRLKENMEKLTEERDQRIAAENREKEQNKRLQRQLRD 1882
Score = 30.4 bits (67), Expect = 3.5
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Query: 32 WQVYSSAQDPDGRCICTVVAPEQNLCSRDAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDF 91
W+++++ R + V E+ + ++D + +QLR LEK + + + + R +
Sbjct: 1237 WKLFTTV-----RPLIEVQLSEEQIRNKDEEIQQLRSKLEKAEKERNELRLNSDRLESRI 1291
Query: 92 QYVLKMETQMKGLKAKFRQI---EDDRKTLMTKHFQELKEKMDELLPLIPVLEQYKTDAK 148
+ T + Q+ E + K +EL+ + D L + V+E +A+
Sbjct: 1292 SELTSELTDERNTGESASQLLDAETAERLRAEKEMKELQTQYDALKKQMEVMEMEVMEAR 1351
Query: 149 LI 150
LI
Sbjct: 1352 LI 1353
>gi|39930343 transmembrane and coiled-coil domain family 1 isoform b
[Homo sapiens]
Length = 329
Score = 39.3 bits (90), Expect = 0.008
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 60 DAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLM 119
DA +++++ E + +S E L QRD+ +++ ++ + + ++E+ L
Sbjct: 136 DALLHEIQEIRETQARLEESFETLKEHYQRDYSLIMQ---TLQEERYRCERLEEQLNDLT 192
Query: 120 TKHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEEL 179
H E+ EL + + K+ Q E R++ L Q I + ++
Sbjct: 193 ELHQNEILNLKQELASM---------EEKIAYQSYERARDIQEALEACQTRISKMELQQQ 243
Query: 180 HQRVLSLETRLRDCMKKLTCGKLMKI 205
Q+V+ LE L + + GKL+ I
Sbjct: 244 QQQVVQLE-GLENATARNLLGKLINI 268
>gi|190014612 transmembrane and coiled-coil domain family 1 isoform
c [Homo sapiens]
Length = 539
Score = 39.3 bits (90), Expect = 0.008
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 60 DAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLM 119
DA +++++ E + +S E L QRD+ +++ ++ + + ++E+ L
Sbjct: 346 DALLHEIQEIRETQARLEESFETLKEHYQRDYSLIMQ---TLQEERYRCERLEEQLNDLT 402
Query: 120 TKHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEEL 179
H E+ EL + + K+ Q E R++ L Q I + ++
Sbjct: 403 ELHQNEILNLKQELASM---------EEKIAYQSYERARDIQEALEACQTRISKMELQQQ 453
Query: 180 HQRVLSLETRLRDCMKKLTCGKLMKI 205
Q+V+ LE L + + GKL+ I
Sbjct: 454 QQQVVQLE-GLENATARNLLGKLINI 478
>gi|190014610 transmembrane and coiled-coil domain family 1 isoform
a [Homo sapiens]
Length = 653
Score = 39.3 bits (90), Expect = 0.008
Identities = 31/146 (21%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 60 DAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLM 119
DA +++++ E + +S E L QRD+ +++ ++ + + ++E+ L
Sbjct: 460 DALLHEIQEIRETQARLEESFETLKEHYQRDYSLIMQ---TLQEERYRCERLEEQLNDLT 516
Query: 120 TKHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEEL 179
H E+ EL + + K+ Q E R++ L Q I + ++
Sbjct: 517 ELHQNEILNLKQELASM---------EEKIAYQSYERARDIQEALEACQTRISKMELQQQ 567
Query: 180 HQRVLSLETRLRDCMKKLTCGKLMKI 205
Q+V+ LE L + + GKL+ I
Sbjct: 568 QQQVVQLE-GLENATARNLLGKLINI 592
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 38.9 bits (89), Expect = 0.010
Identities = 28/135 (20%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 65 QLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLMTKH-- 122
++ +L +++Q+ S+ + ++ + F V+ E++++GL + + +DD T + +
Sbjct: 755 EVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKS 814
Query: 123 ----FQELKE-KMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYE 177
FQ K MD VLE+ + + I +E + + L ++ E+ +Y +
Sbjct: 815 TDQEFQNFKTLHMDFEQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTEL-SYKTQ 873
Query: 178 ELHQRVLSLETRLRD 192
EL ++ ++ RL +
Sbjct: 874 ELQEKTREVQERLNE 888
Score = 32.0 bits (71), Expect = 1.2
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 68 QLLEKVQNMSQSIEVLNLRTQRDFQYVLK--METQMKGLKAKFRQIEDDRKTLMTKHFQE 125
+L EK Q + E+ +L +RD +K +E + LK R+ + +K Q
Sbjct: 1332 RLNEKFQESQE--EIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQS 1389
Query: 126 L--KEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAY-----DYEE 178
L KEK +E ++ +EQ+K + + + E+ LS L +E+ + D +
Sbjct: 1390 LNMKEKDNETTKIVSEMEQFKPKDSALLRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQR 1449
Query: 179 LHQRVLSLETRLRDCMKKLTCGKL 202
L + + S +L++ +K++ L
Sbjct: 1450 LQEVLQSESDQLKENIKEIVAKHL 1473
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 38.1 bits (87), Expect = 0.017
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 27/180 (15%)
Query: 20 DPSKTQISPKEGWQVYSSAQDPDGRCICTVVAPEQNLCSRDAKSRQLRQLLEKVQNMSQS 79
D S+TQ KE Q+Y Q + I + E+ L +++ LRQ L+ + S
Sbjct: 1006 DLSQTQCQKKETEQMYQIEQSKLKKYIAKQESVEERLSQLQSENMLLRQQLDDAHKKANS 1065
Query: 80 IEVLNLRTQRDFQYVLK-----METQMKGLKAKFRQIEDDRKTLMTKHFQELKEKMDELL 134
E + Q F K E Q+ L+ K +++ D+ + LKE+MD+
Sbjct: 1066 QEKTSSTIQDQFHSAAKNLQAESEKQILSLQEKNKELMDE--------YNHLKERMDQ-- 1115
Query: 135 PLIPVLEQYKTDAKL-ITQFKEEIRNLSAVLTGIQEEIGAYDYEELHQRVLSLETRLRDC 193
E+ K K+ +T+ +E + + L E + +L Q + S++ + C
Sbjct: 1116 -----CEKEKAGRKIDLTEAQETVPSRCLHLDAENEVL------QLQQTLFSMKAIQKQC 1164
>gi|54792740 transmembrane and coiled-coil domain family 2 [Homo
sapiens]
Length = 709
Score = 37.4 bits (85), Expect = 0.029
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Query: 60 DAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLM 119
DA +LR++ E ++ S+E L + QRD+ Y M ++ + ++ ++E+ L
Sbjct: 517 DALLEELREIKEGQSHLEDSMEDLKTQLQRDYTY---MTQCLQEERYRYERLEEQLNDLT 573
Query: 120 TKHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAVLTGIQEEIGAYDYEEL 179
H E+ EL + + K+ Q E R++ + + + ++
Sbjct: 574 ELHQNEMTNLKQELASM---------EEKVAYQSYERARDIQEAVESCLTRVTKLELQQQ 624
Query: 180 HQRVLSLE 187
Q+V+ LE
Sbjct: 625 QQQVVQLE 632
>gi|150010552 FK506 binding protein 15, 133kDa [Homo sapiens]
Length = 1219
Score = 37.4 bits (85), Expect = 0.029
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 54 QNLCS-RDAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIE 112
Q +C+ RDA ++L QL EK + I L + ++ + + K ++QM G++A
Sbjct: 825 QEVCAQRDAYQQKLVQLQEKCLALQAQITALTKQNEQHIKELEKNKSQMSGVEAAASDPS 884
Query: 113 DDRKTLMTKHFQELKEKMD 131
+ K +M + FQ L+ + +
Sbjct: 885 EKVKKIMNQVFQSLRREFE 903
>gi|83715968 sarcoma antigen NY-SAR-79 [Homo sapiens]
Length = 1079
Score = 37.0 bits (84), Expect = 0.037
Identities = 30/128 (23%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 68 QLLEKVQNMSQSIEVLNLRTQRDFQY---VLKMETQMKGLKAKFRQIEDDRKTLMTKHFQ 124
QLL+ ++ +++E L +R + + Y + K+ + + LK + +++ ++TL +H +
Sbjct: 26 QLLDFKTSLLEALEELRMRREAEIHYEEQIGKIIVETQELKWQKETLQNQKETLAEQHKE 85
Query: 125 ELKEKMDELLPLIPVLEQYKTDAKLITQFKE-EIRNLSAVLTGIQEEIGAYDYEELHQRV 183
+ +L + LE+ K +L T+ KE EI L L +Q + Y L ++V
Sbjct: 86 AMAVFKKQLQMKMCALEEEKGKYQLATEIKEKEIEGLKETLKALQ--VSKY---SLQKKV 140
Query: 184 LSLETRLR 191
+E +++
Sbjct: 141 SEMEQKVQ 148
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 35.8 bits (81), Expect = 0.083
Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 15/139 (10%)
Query: 50 VAPEQNLCSRDAKSRQLRQLLEKVQNMSQSI--EVLNLRTQRDFQYVLK--METQMKGLK 105
V E+ L + + +L++LLE+ + +Q E+ N++ D L+ +ETQ+ L+
Sbjct: 390 VGLERQLEEKTEECSRLQELLERRKGEAQQSNKELQNMKRLLDQGEDLRHGLETQVMELQ 449
Query: 106 AKFRQIE--DDRKTLMTKHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAV 163
K + ++ + K ++ K E +E ++E+L +E+ Q + R L+A+
Sbjct: 450 NKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEE---------QLRLRERELTAL 500
Query: 164 LTGIQEEIGAYDYEELHQR 182
++EE+ + D E H R
Sbjct: 501 KGALKEEVASRDQEVEHVR 519
>gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]
Length = 1498
Score = 35.8 bits (81), Expect = 0.083
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 60 DAKSRQLRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGLKAKFRQIEDDRKTLM 119
D++ ++LRQ L +V ++ E R R+ V ++ M L+ + + +R +
Sbjct: 877 DSELKELRQELMQVHGEKRTAEAELSRLHRE---VAQVRQHMADLEGHLQSAQKERDEME 933
Query: 120 TKHFQELKEKMDELLPLIPVLEQYKTDA--------KLITQFKEEIRNLSAVLTGIQEEI 171
T H Q L+ ++++ + E K K IT+ K+++R L + LT Q+E+
Sbjct: 934 T-HLQSLQFDKEQMVAVTEANEALKKQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEM 992
>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 35.8 bits (81), Expect = 0.083
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 28/222 (12%)
Query: 54 QNLCSRDAKSRQ-LRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGL-KAKFRQI 111
Q SR K Q L+ L++V + I++ L RD + LK + + K +
Sbjct: 1489 QGEISRIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWF 1548
Query: 112 EDDRKTLMTKHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKE-----------EIRNL 160
D + + K QE KE + L L +++ +++ TQ + + +
Sbjct: 1549 LQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEI 1608
Query: 161 SAVLTGIQEEIGAY------DYEELHQRVLSLETRLRDCMKKLTCGKL--MKITGPVTVK 212
S LT + +I Y DYEE HQR ++ E + + K+ KL M+ +K
Sbjct: 1609 SNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLK 1668
Query: 213 TSGTRFGAWMTDPLA---SEKNNRVWYMDSYTNNKIVREYKS 251
+ G DP A E + R W + K + + KS
Sbjct: 1669 ----KLGLISRDPAAYPDMESDIRSWELFLSNVTKEIEKAKS 1706
>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 35.8 bits (81), Expect = 0.083
Identities = 53/222 (23%), Positives = 89/222 (40%), Gaps = 28/222 (12%)
Query: 54 QNLCSRDAKSRQ-LRQLLEKVQNMSQSIEVLNLRTQRDFQYVLKMETQMKGL-KAKFRQI 111
Q SR K Q L+ L++V + I++ L RD + LK + + K +
Sbjct: 1489 QGEISRIEKEHQVLQDQLQEVYENYEQIKLKGLEETRDLEEKLKRHLEENKISKTELDWF 1548
Query: 112 EDDRKTLMTKHFQELKEKMDELLPLIPVLEQYKTDAKLITQFKE-----------EIRNL 160
D + + K QE KE + L L +++ +++ TQ + + +
Sbjct: 1549 LQDLEREIKKWQQEKKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKEHELHLDQSLEI 1608
Query: 161 SAVLTGIQEEIGAY------DYEELHQRVLSLETRLRDCMKKLTCGKL--MKITGPVTVK 212
S LT + +I Y DYEE HQR ++ E + + K+ KL M+ +K
Sbjct: 1609 SNTLTNEKMKIEEYIKKGKEDYEESHQRAVAAEVSVLENWKESEVYKLQIMESQAEAFLK 1668
Query: 213 TSGTRFGAWMTDPLA---SEKNNRVWYMDSYTNNKIVREYKS 251
+ G DP A E + R W + K + + KS
Sbjct: 1669 ----KLGLISRDPAAYPDMESDIRSWELFLSNVTKEIEKAKS 1706
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,775,174
Number of Sequences: 37866
Number of extensions: 645887
Number of successful extensions: 2260
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 2118
Number of HSP's gapped (non-prelim): 243
length of query: 458
length of database: 18,247,518
effective HSP length: 106
effective length of query: 352
effective length of database: 14,233,722
effective search space: 5010270144
effective search space used: 5010270144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.