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Search of human proteins with 157388908
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157388908 hypothetical protein LOC54954 [Homo sapiens]
(1096 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157388908 hypothetical protein LOC54954 [Homo sapiens] 2266 0.0
gi|39652628 oxidative stress-associated Src activator [Homo sapi... 1084 0.0
gi|24308334 family with sequence similarity 120B [Homo sapiens] 115 2e-25
gi|61966923 forkhead box B2 [Homo sapiens] 53 2e-06
gi|8923842 forkhead box J2 [Homo sapiens] 47 8e-05
gi|4885237 forkhead box C2 [Homo sapiens] 47 1e-04
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 47 1e-04
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 47 1e-04
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 47 1e-04
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 46 2e-04
gi|31657109 zinc finger protein 282 [Homo sapiens] 45 3e-04
gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens] 45 3e-04
gi|51702521 POU domain, class 3, transcription factor 2 [Homo sa... 44 8e-04
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 44 8e-04
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 44 8e-04
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 44 8e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 44 8e-04
gi|124107614 PR domain containing 13 [Homo sapiens] 43 0.002
gi|12751477 forkhead box L2 [Homo sapiens] 42 0.002
gi|47132620 keratin 2 [Homo sapiens] 42 0.003
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 41 0.005
gi|32307177 forkhead box G1 [Homo sapiens] 41 0.005
gi|66730481 neuregulin 3 [Homo sapiens] 41 0.007
gi|22027622 TNF receptor-associated factor 4 [Homo sapiens] 41 0.007
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens] 41 0.007
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens] 41 0.007
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens] 41 0.007
gi|189027090 cytoplasmic polyadenylation element binding protein... 41 0.007
gi|169636435 caudal type homeobox 2 [Homo sapiens] 40 0.009
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 40 0.009
>gi|157388908 hypothetical protein LOC54954 [Homo sapiens]
Length = 1096
Score = 2266 bits (5871), Expect = 0.0
Identities = 1096/1096 (100%), Positives = 1096/1096 (100%)
Query: 1 MGVQGFQEFLEKRCPGAVVPVDLLKLARTVSRQQQQQHLHRQLPPTAALAPGAPRAARGS 60
MGVQGFQEFLEKRCPGAVVPVDLLKLARTVSRQQQQQHLHRQLPPTAALAPGAPRAARGS
Sbjct: 1 MGVQGFQEFLEKRCPGAVVPVDLLKLARTVSRQQQQQHLHRQLPPTAALAPGAPRAARGS 60
Query: 61 VPLQPPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHPPLPPPPPPQLPGARVLV 120
VPLQPPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHPPLPPPPPPQLPGARVLV
Sbjct: 61 VPLQPPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHPPLPPPPPPQLPGARVLV 120
Query: 121 DAGSALPRLYGGYQTDWVCGGQWNAMLGYLSALCQACAYPGGDGLELVVMFPGGLGKDRL 180
DAGSALPRLYGGYQTDWVCGGQWNAMLGYLSALCQACAYPGGDGLELVVMFPGGLGKDRL
Sbjct: 121 DAGSALPRLYGGYQTDWVCGGQWNAMLGYLSALCQACAYPGGDGLELVVMFPGGLGKDRL 180
Query: 181 AEWGRRCQAERQTAQLIVGHVGNKGTPPPRAWFLPPACLSHCVRLALIRFRVKVFQSLED 240
AEWGRRCQAERQTAQLIVGHVGNKGTPPPRAWFLPPACLSHCVRLALIRFRVKVFQSLED
Sbjct: 181 AEWGRRCQAERQTAQLIVGHVGNKGTPPPRAWFLPPACLSHCVRLALIRFRVKVFQSLED 240
Query: 241 HHLEVVAFFRENGFHGLLAHDSEYALYNIPSYYSSHALKLSWNGKNLTTNQFLMQEVAKQ 300
HHLEVVAFFRENGFHGLLAHDSEYALYNIPSYYSSHALKLSWNGKNLTTNQFLMQEVAKQ
Sbjct: 241 HHLEVVAFFRENGFHGLLAHDSEYALYNIPSYYSSHALKLSWNGKNLTTNQFLMQEVAKQ 300
Query: 301 LGLKRMNFPIFAALLGNHILPDEDLAAFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKA 360
LGLKRMNFPIFAALLGNHILPDEDLAAFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKA
Sbjct: 301 LGLKRMNFPIFAALLGNHILPDEDLAAFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKA 360
Query: 361 VSEYVSSIKDPSNLDVVGKDVFKQSQSRTEDKIERFKKAVEYYSVTTKLSSLPVGPSFLG 420
VSEYVSSIKDPSNLDVVGKDVFKQSQSRTEDKIERFKKAVEYYSVTTKLSSLPVGPSFLG
Sbjct: 361 VSEYVSSIKDPSNLDVVGKDVFKQSQSRTEDKIERFKKAVEYYSVTTKLSSLPVGPSFLG 420
Query: 421 FRNNRLGNPPLPRNQVGTISAGKPMFSHQVPQKVKYPPPFPVGPNSSLLFSSHALGESHA 480
FRNNRLGNPPLPRNQVGTISAGKPMFSHQVPQKVKYPPPFPVGPNSSLLFSSHALGESHA
Sbjct: 421 FRNNRLGNPPLPRNQVGTISAGKPMFSHQVPQKVKYPPPFPVGPNSSLLFSSHALGESHA 480
Query: 481 FSEDPMLQNSPFANWAVSYDSSASQFPNYLPSKASPPLGPDSSHSSSSDGDEPNGASSDH 540
FSEDPMLQNSPFANWAVSYDSSASQFPNYLPSKASPPLGPDSSHSSSSDGDEPNGASSDH
Sbjct: 481 FSEDPMLQNSPFANWAVSYDSSASQFPNYLPSKASPPLGPDSSHSSSSDGDEPNGASSDH 540
Query: 541 ITEAFHHQPEWGNPNRDRGSWAQPVDTGVSEASLGDGEPHIPSLLSMSTRNHMDITIPPL 600
ITEAFHHQPEWGNPNRDRGSWAQPVDTGVSEASLGDGEPHIPSLLSMSTRNHMDITIPPL
Sbjct: 541 ITEAFHHQPEWGNPNRDRGSWAQPVDTGVSEASLGDGEPHIPSLLSMSTRNHMDITIPPL 600
Query: 601 PPVAPEVLRVAEHRHRRGLMYPYIYHVLTKGEIKIPVCIEDECNMELPPAALLFRSARQY 660
PPVAPEVLRVAEHRHRRGLMYPYIYHVLTKGEIKIPVCIEDECNMELPPAALLFRSARQY
Sbjct: 601 PPVAPEVLRVAEHRHRRGLMYPYIYHVLTKGEIKIPVCIEDECNMELPPAALLFRSARQY 660
Query: 661 VYGVLFSLAETQRKMERLAMRRRLPVEVPSVILKEWSAYKGKSPQTPELVSALTFREWTC 720
VYGVLFSLAETQRKMERLAMRRRLPVEVPSVILKEWSAYKGKSPQTPELVSALTFREWTC
Sbjct: 661 VYGVLFSLAETQRKMERLAMRRRLPVEVPSVILKEWSAYKGKSPQTPELVSALTFREWTC 720
Query: 721 PNLKKLWLGKAVEDKNRRMRAFLACMKSDTPSMLNPANVPTHLLLMCCVLRYMVQWPGGR 780
PNLKKLWLGKAVEDKNRRMRAFLACMKSDTPSMLNPANVPTHLLLMCCVLRYMVQWPGGR
Sbjct: 721 PNLKKLWLGKAVEDKNRRMRAFLACMKSDTPSMLNPANVPTHLLLMCCVLRYMVQWPGGR 780
Query: 781 ILHRHELDTFLAQAVSTQLYEPDRLQELKIEKLDARGIQLAALFMSGVDTALFANDACGQ 840
ILHRHELDTFLAQAVSTQLYEPDRLQELKIEKLDARGIQLAALFMSGVDTALFANDACGQ
Sbjct: 781 ILHRHELDTFLAQAVSTQLYEPDRLQELKIEKLDARGIQLAALFMSGVDTALFANDACGQ 840
Query: 841 PVPWEHCCPWIYFDGKLFQSKLIKAGRERVSLVELCDGQADLATKVEKMRQSILEGVNMN 900
PVPWEHCCPWIYFDGKLFQSKLIKAGRERVSLVELCDGQADLATKVEKMRQSILEGVNMN
Sbjct: 841 PVPWEHCCPWIYFDGKLFQSKLIKAGRERVSLVELCDGQADLATKVEKMRQSILEGVNMN 900
Query: 901 HPPPSALLPSPTFVPPMVPSLYPVSLYSRAMGSMPLPPQGRSRGFAGLHPIPPQGGKLEI 960
HPPPSALLPSPTFVPPMVPSLYPVSLYSRAMGSMPLPPQGRSRGFAGLHPIPPQGGKLEI
Sbjct: 901 HPPPSALLPSPTFVPPMVPSLYPVSLYSRAMGSMPLPPQGRSRGFAGLHPIPPQGGKLEI 960
Query: 961 AGMVVGQWAGSRSSRGRGSFGMQVVSVGGPGKGHGKEQTGRGSKGHKKGNKQGSSDGVSK 1020
AGMVVGQWAGSRSSRGRGSFGMQVVSVGGPGKGHGKEQTGRGSKGHKKGNKQGSSDGVSK
Sbjct: 961 AGMVVGQWAGSRSSRGRGSFGMQVVSVGGPGKGHGKEQTGRGSKGHKKGNKQGSSDGVSK 1020
Query: 1021 SLELHQGRSRSQVNGNSGALIKEEKSDHRLPAPSQCALSRDSNECNNGNRYLPMNNREKN 1080
SLELHQGRSRSQVNGNSGALIKEEKSDHRLPAPSQCALSRDSNECNNGNRYLPMNNREKN
Sbjct: 1021 SLELHQGRSRSQVNGNSGALIKEEKSDHRLPAPSQCALSRDSNECNNGNRYLPMNNREKN 1080
Query: 1081 HLQEQKLETVAQRKED 1096
HLQEQKLETVAQRKED
Sbjct: 1081 HLQEQKLETVAQRKED 1096
>gi|39652628 oxidative stress-associated Src activator [Homo sapiens]
Length = 1118
Score = 1084 bits (2803), Expect = 0.0
Identities = 609/1098 (55%), Positives = 731/1098 (66%), Gaps = 129/1098 (11%)
Query: 110 PPQLPGARVLVDAGSALPRLYGGYQTDWVCGGQWNAMLGYLSALCQACAYPGGDGLELVV 169
PPQ P R+LVDA + L RLYGG+ TDWV GGQWN MLGYL+AL +AC G +EL V
Sbjct: 39 PPQTP-LRLLVDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACF---GGNIELFV 94
Query: 170 MFPGGLGKDRLAEWGRRCQAERQTAQLIVGHVGNKGTPPPRAWFLPPACLSHCVRLALIR 229
F G L K RL EW +R ERQTAQ IV HV NKGTPPP+ WFLPP C++HC+RLALIR
Sbjct: 95 FFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIR 154
Query: 230 FRVKVFQSLEDHHLEVVAFFRENGFHGLLAHDSEYALYNIPSYYSSHALKLSWNGKNLTT 289
F VKV QS+EDHH EV+ F RENGFHGL+A+DS+YAL NIP Y+S+HALKLS NGK+LTT
Sbjct: 155 FHVKVAQSIEDHHQEVIGFCRENGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTT 214
Query: 290 NQFLMQEVAKQLGLKRMNFPIFAALLGNHILPDEDLAAFHWSLLGPEHPLASLKVRAHQL 349
+Q+LM EVAKQL L FPIFAALLGNHILPDEDLA+FHWSLLGPEHPLASLKVRAHQL
Sbjct: 215 SQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQL 274
Query: 350 VLPPCDVVIKAVSEYVSSIKDPSNLDVVGKDVFKQSQSRTEDKIERFKKAVEYYSVTTKL 409
VLPPCDVVIKAV++YV +I+D S+LD + KDVF+ SQSRT+DK+ RFK+A+ YYS T+K
Sbjct: 275 VLPPCDVVIKAVADYVRNIQDTSDLDAIAKDVFQHSQSRTDDKVIRFKRAIGYYSATSKP 334
Query: 410 SSLPVGPSFLGFRNNRLGNP--------PLPRNQVGTISAGKPMFSHQVPQKVKYPP--P 459
S P +L R G P P N T KP+ + QVP P P
Sbjct: 335 MSFHP-PHYLAARPGPFGMPGMVPPHVPPQMLNIPQTSLQAKPV-APQVPSPGGAPGQGP 392
Query: 460 FPVGPNS----SLLFSSHALGESHAFSEDPML-QNSPFANWAVSYDSSASQFPNYLPSKA 514
+P + +L S L E +++S P +++P + + + S PN++ S
Sbjct: 393 YPYSLSEPAPLTLDTSGKNLTEQNSYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSAY 452
Query: 515 SPPLGPDSSHSSSSDGDEPNGASSDHIT--------EAFHHQPEW----GNPNRDRGSWA 562
P SS SSSSD DE +G +++HI+ H +P+ G+ + GS
Sbjct: 453 FP----GSSTSSSSDNDEGSGGATNHISGNKIGWEKTGSHSEPQARGDPGDQTKAEGSST 508
Query: 563 QPVDTGVSE---ASLGDGEPHIPSLLSMSTRNHMDITIPPLPPVAPEVLRVAEHRHRRGL 619
+ ++E + +G +P IP LLSM TRNHMDIT PPLPPVAPEVLRVAEHRH++GL
Sbjct: 509 ASSGSQLAEGKGSQMGTVQP-IPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGL 567
Query: 620 MYPYIYHVLTKGEIKIPVCIEDECNMELPPAALLFRSARQYVYGVLFSLAETQRKMERLA 679
MYPYI+HVLTKGEIKI V IEDE N +LPPAALL+R RQYVYGVLFSLAE+++K ERLA
Sbjct: 568 MYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLA 627
Query: 680 MRR-RLPVEVPSVILKEWSAYKGKSPQTPELVSALTFREWTCPNLKKLWLGKAVEDKNRR 738
R+ RLP E VI+KEW+AYKGKSPQTPELV AL FREWTCPNLK+LWLGKAVEDKNRR
Sbjct: 628 FRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKRLWLGKAVEDKNRR 687
Query: 739 MRAFLACMKSDTPSMLNPANVPTHLLLMCCVLRYMVQWPGGRILHRHELDTFLAQAVSTQ 798
MRAFLACM+SDTP+MLNPANVPTHL+++CCVLRYMVQWPG RIL R ELD FLAQA+S +
Sbjct: 688 MRAFLACMRSDTPAMLNPANVPTHLMVLCCVLRYMVQWPGARILRRQELDAFLAQALSPK 747
Query: 799 LYEPDRLQELKIEKLDARGIQLAALFMSGVDTALFANDACGQPVPWEHCCPWIYFDGKLF 858
LYEPD+LQELKIE LD RGIQL+ALFMSGVD ALFANDACGQP+PWEHCCPW+YFDGKLF
Sbjct: 748 LYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLF 807
Query: 859 QSKLIKAGRERVSLVELCDGQADLATKVEKMRQSILEGVNMNHPPPSALLPSPTFVPPMV 918
QSKL+KA RE+ L++LCDGQAD A KVEKMRQS+LEG++ + S LP P PP +
Sbjct: 808 QSKLLKASREKTPLIDLCDGQADQAAKVEKMRQSVLEGLSFSR--QSHTLPFPP--PPAL 863
Query: 919 PSLYPVSLYSRAMGSMPLPPQGRSRGFA-------------------------------- 946
P YP S Y R G +P P QGR RGFA
Sbjct: 864 P-FYPASAYPRHFGPVP-PSQGRGRGFAGVCGFGGPYGETVATGPYRAFRVAAASGHCGA 921
Query: 947 --------------GLHPIPPQGGKLEIAGMVVGQWAGSRSSR-GRGSFGMQVVSVGGPG 991
G+ PIP QGGKLEIAG VVG WAGSR R GRG F +QVVSVGGP
Sbjct: 922 FSGSDSSRTSKSQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPA 981
Query: 992 KGHGK--------EQTGRGSKGHKKGNKQ-----------GSSDGVSKSLELHQGRSRSQ 1032
+G + GRG + + +G K S++ V+K L+ G S+S
Sbjct: 982 RGRPRGVISTPVIRTFGRGGRYYGRGYKNQAAIQGRPPYAASAEEVAKELKSKSGESKSS 1041
Query: 1033 VNGNSGAL-----IKEEK---------SDHRLPAPSQCALSRDSNECNNGNRYLPMNNRE 1078
+ G+L + EEK D R P+ S+ AL+ DS CN N +L + +
Sbjct: 1042 AMSSDGSLAENGVMAEEKPAPQMNGSTGDARAPSHSESALNNDSKTCNT-NPHLNALSTD 1100
Query: 1079 KNHLQEQKLETVAQRKED 1096
+E LE KE+
Sbjct: 1101 SACRREAALEAAVLNKEE 1118
Score = 48.9 bits (115), Expect = 3e-05
Identities = 21/28 (75%), Positives = 25/28 (89%)
Query: 1 MGVQGFQEFLEKRCPGAVVPVDLLKLAR 28
MGVQGFQ+++EK CP AVVPV+L KLAR
Sbjct: 1 MGVQGFQDYIEKHCPSAVVPVELQKLAR 28
>gi|24308334 family with sequence similarity 120B [Homo sapiens]
Length = 910
Score = 115 bits (289), Expect = 2e-25
Identities = 81/262 (30%), Positives = 123/262 (46%), Gaps = 21/262 (8%)
Query: 606 EVLRVAEHRHRRGLMYPYIYHVLTKGEIKIPVCIEDECNMELPPAALLFRSARQYVYGVL 665
E+L+VA H + Y +Y++++ GEI+ +EDE + LP A ++R RQ VY +L
Sbjct: 575 EILKVARTHHVQAESY-LVYNIMSSGEIECSNTLEDELDQALPSQAFIYRPIRQRVYSLL 633
Query: 666 FSLAETQRKMERLAMRRRLPVEVPSVILKEWSAYKGKSPQTPELVSALTFR-EWTCPNLK 724
+ V + +KEW Y G + P+LV L P+LK
Sbjct: 634 LEDCQD--------------VTSTCLAVKEWFVYPGNPLRHPDLVRPLQMTIPGGTPSLK 679
Query: 725 KLWLGKAVEDKNRRMRAFLACMK-SDTPSMLNPANVPTHLLLMCCVLRYMVQWPGGRILH 783
LWL + E + RR+ LAC S + L P L CC+L Y+ L
Sbjct: 680 ILWLNQEPEIQVRRLDTLLACFNLSSSREELQAVESPFQAL--CCLLIYLFVQVDTLCLE 737
Query: 784 RHELDTFLAQAVSTQLYEPDRLQELKIEKLDARGIQLAALFMSGVDTALFANDACGQPVP 843
+L F+AQA+ Q +L L+ + ++ R +QL +L + G+ T + N ACG P
Sbjct: 738 --DLHAFIAQALCLQGKSTSQLVNLQPDYINPRAVQLGSLLVRGLTTLVLVNSACGFPWK 795
Query: 844 WEHCCPWIYFDGKLFQSKLIKA 865
PW FDGKLF K +++
Sbjct: 796 TSDFMPWNVFDGKLFHQKYLQS 817
Score = 88.6 bits (218), Expect = 3e-17
Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 22/272 (8%)
Query: 93 HHGQAQPGLHPPLPPPPPPQLPGARVLVDAGSALPRLYGGYQTDWVCGGQWNAMLGYLSA 152
HH PG P ++VDA L Y W+CGGQW Y SA
Sbjct: 29 HHRSKYPGCTPT-------------IVVDAMCCLRYWYT--PESWICGGQWRE---YFSA 70
Query: 153 LCQACAYPGGDGLELVVMFPGGLGKDRLAEWGRRCQAERQTAQLIVGHVGNKGTPPPRAW 212
L G++L+ F G + +D+ EW +R + I ++ + P R
Sbjct: 71 LRDFVKTFTAAGIKLIFFFDGMVEQDKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNM 130
Query: 213 FLPPACLSHCVRLALIRFRVKVFQSLEDHHLEVVAFFRENGFHGLLAHDSEYALYNIPSY 272
F P+ L+ R AL + SL++ EV ++ ++ G+L D++Y +Y+ Y
Sbjct: 131 FFIPSGLAVFTRFALKTLGQETLCSLQEADYEVASYGLQHNCLGILGEDTDYLIYDTCPY 190
Query: 273 YSSHALKLSWNGKNLTTNQFLMQEVAKQLGLKRMNFPIFAALLGNHILPDEDLAAFHWSL 332
+S L L ++L T +++ + LGL + P+ A LLGN I+P+ +F +
Sbjct: 191 FSISELCL----ESLDTVMLCREKLCESLGLCVADLPLLACLLGNDIIPEGMFESFRYKC 246
Query: 333 LGPEHPLASLKVRAHQLVLPPCDVVIKAVSEY 364
L + + ++L D + K + Y
Sbjct: 247 LSSYTSVKENFDKKGNIILAVSDHISKVLYLY 278
>gi|61966923 forkhead box B2 [Homo sapiens]
Length = 432
Score = 52.8 bits (125), Expect = 2e-06
Identities = 26/48 (54%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 70 AALGAYSGG-AGPIRHHHPAHHFHHHGQA--QPGLHPPLPPPPPPQLP 114
+A GA GG P HHHP HH HHH A HPP PPPPPP P
Sbjct: 126 SAPGAGPGGHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPP 173
>gi|8923842 forkhead box J2 [Homo sapiens]
Length = 574
Score = 47.4 bits (111), Expect = 8e-05
Identities = 40/113 (35%), Positives = 47/113 (41%), Gaps = 17/113 (15%)
Query: 32 RQQQQQHLHRQLPPTAAL-----APG-APRAARGSVPLQPP-----LPPAA--LGAYSGG 78
+QQQQQ Q PP + AP P A G+ PL P PP GA G
Sbjct: 299 QQQQQQQQPPQPPPQQSQPQQQQAPAQGPSAVGGAPPLHTPSTDGCTPPGGKQAGAEGYG 358
Query: 79 AGPIRHHHPA---HHFHHHGQAQPGLHPP-LPPPPPPQLPGARVLVDAGSALP 127
P+ HP H +H Q P HP PPPP PQ G + + G A P
Sbjct: 359 PPPVMAMHPPPLQHGGYHPHQHHPHSHPAQQPPPPQPQAQGQAPINNTGFAFP 411
>gi|4885237 forkhead box C2 [Homo sapiens]
Length = 501
Score = 47.0 bits (110), Expect = 1e-04
Identities = 29/74 (39%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 45 PTAALAPGAPRAARGSVPLQPPLPPAALGAYSGGAGPIRH--HHPAHHFHHHGQAQPGLH 102
P P A A P P P +AL +G G + HH HH HHH QA P
Sbjct: 345 PAHMCVPPALDEALSDHPSGPTSPLSALNLAAGQEGALAATGHHHQHHGHHHPQAPP--P 402
Query: 103 PPLPPPPPPQLPGA 116
PP P P P PGA
Sbjct: 403 PPAPQPQPTPQPGA 416
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 47.0 bits (110), Expect = 1e-04
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 17/62 (27%)
Query: 70 AALGA-YSGGAGPIRHHHPAHHFHHHGQAQP----------------GLHPPLPPPPPPQ 112
A+ GA +S P HHHP HH HHH QP H P PPPPPP
Sbjct: 642 ASAGAPHSAQTHPHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPP 701
Query: 113 LP 114
P
Sbjct: 702 PP 703
Score = 34.7 bits (78), Expect = 0.51
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 70 AALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHPPLPP------PPPPQLPGA 116
A L S GA HP HH H H HPP PP PP P PG+
Sbjct: 637 AKLHGASAGAPHSAQTHPHHHHHPHHHHHHH-HPPQPPSPLLLLPPQPDEPGS 688
Score = 33.9 bits (76), Expect = 0.87
Identities = 24/65 (36%), Positives = 25/65 (38%), Gaps = 16/65 (24%)
Query: 62 PLQPPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHPPLPPPPPPQL---PGARV 118
P QPP P L G RHH P PP PPPPPP L P R
Sbjct: 669 PPQPPSPLLLLPPQPDEPGSERHH-------------PAPPPPPPPPPPPPLAQHPHHRG 715
Query: 119 LVDAG 123
L+ G
Sbjct: 716 LLSPG 720
Score = 30.4 bits (67), Expect = 9.6
Identities = 39/145 (26%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 889 MRQSILEGVNMNHPPPSALLPSPTFVPPMVPSLYPVSLYSRAMGSMPLPPQGRSRGFAGL 948
+RQ+ L+ SA P PP V + P GS P PP G + L
Sbjct: 506 LRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGP--------GSGPPPPAGGAGSRDAL 557
Query: 949 HPIPPQG-------GKLEIAGMVVGQWAGSRSSRGRGSFGMQVVSVGGPGKGHGKEQTGR 1001
PP G G A V AG+ ++ G G G +V + P G+ + G
Sbjct: 558 FESPPGGSGGDCSAGSTPPADSVAAAGAGA-AAAGSGPAGSRVPAPHHPHLLEGR-KAGG 615
Query: 1002 GSKGHKKGNKQ-GSSDGVSKSLELH 1025
GS H + G D +LH
Sbjct: 616 GSYHHSSAFRPVGGKDDAESLAKLH 640
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 47.0 bits (110), Expect = 1e-04
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 17/62 (27%)
Query: 70 AALGA-YSGGAGPIRHHHPAHHFHHHGQAQP----------------GLHPPLPPPPPPQ 112
A+ GA +S P HHHP HH HHH QP H P PPPPPP
Sbjct: 642 ASAGAPHSAQTHPHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPP 701
Query: 113 LP 114
P
Sbjct: 702 PP 703
Score = 34.7 bits (78), Expect = 0.51
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 70 AALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHPPLPP------PPPPQLPGA 116
A L S GA HP HH H H HPP PP PP P PG+
Sbjct: 637 AKLHGASAGAPHSAQTHPHHHHHPHHHHHHH-HPPQPPSPLLLLPPQPDEPGS 688
Score = 33.9 bits (76), Expect = 0.87
Identities = 24/65 (36%), Positives = 25/65 (38%), Gaps = 16/65 (24%)
Query: 62 PLQPPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHPPLPPPPPPQL---PGARV 118
P QPP P L G RHH P PP PPPPPP L P R
Sbjct: 669 PPQPPSPLLLLPPQPDEPGSERHH-------------PAPPPPPPPPPPPPLAQHPHHRG 715
Query: 119 LVDAG 123
L+ G
Sbjct: 716 LLSPG 720
Score = 30.4 bits (67), Expect = 9.6
Identities = 39/145 (26%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 889 MRQSILEGVNMNHPPPSALLPSPTFVPPMVPSLYPVSLYSRAMGSMPLPPQGRSRGFAGL 948
+RQ+ L+ SA P PP V + P GS P PP G + L
Sbjct: 506 LRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGP--------GSGPPPPAGGAGSRDAL 557
Query: 949 HPIPPQG-------GKLEIAGMVVGQWAGSRSSRGRGSFGMQVVSVGGPGKGHGKEQTGR 1001
PP G G A V AG+ ++ G G G +V + P G+ + G
Sbjct: 558 FESPPGGSGGDCSAGSTPPADSVAAAGAGA-AAAGSGPAGSRVPAPHHPHLLEGR-KAGG 615
Query: 1002 GSKGHKKGNKQ-GSSDGVSKSLELH 1025
GS H + G D +LH
Sbjct: 616 GSYHHSSAFRPVGGKDDAESLAKLH 640
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 47.0 bits (110), Expect = 1e-04
Identities = 25/62 (40%), Positives = 27/62 (43%), Gaps = 17/62 (27%)
Query: 70 AALGA-YSGGAGPIRHHHPAHHFHHHGQAQP----------------GLHPPLPPPPPPQ 112
A+ GA +S P HHHP HH HHH QP H P PPPPPP
Sbjct: 642 ASAGAPHSAQTHPHHHHHPHHHHHHHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPPPPP 701
Query: 113 LP 114
P
Sbjct: 702 PP 703
Score = 34.7 bits (78), Expect = 0.51
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 70 AALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHPPLPP------PPPPQLPGA 116
A L S GA HP HH H H HPP PP PP P PG+
Sbjct: 637 AKLHGASAGAPHSAQTHPHHHHHPHHHHHHH-HPPQPPSPLLLLPPQPDEPGS 688
Score = 33.9 bits (76), Expect = 0.87
Identities = 24/65 (36%), Positives = 25/65 (38%), Gaps = 16/65 (24%)
Query: 62 PLQPPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHPPLPPPPPPQL---PGARV 118
P QPP P L G RHH P PP PPPPPP L P R
Sbjct: 669 PPQPPSPLLLLPPQPDEPGSERHH-------------PAPPPPPPPPPPPPLAQHPHHRG 715
Query: 119 LVDAG 123
L+ G
Sbjct: 716 LLSPG 720
Score = 30.4 bits (67), Expect = 9.6
Identities = 39/145 (26%), Positives = 53/145 (36%), Gaps = 18/145 (12%)
Query: 889 MRQSILEGVNMNHPPPSALLPSPTFVPPMVPSLYPVSLYSRAMGSMPLPPQGRSRGFAGL 948
+RQ+ L+ SA P PP V + P GS P PP G + L
Sbjct: 506 LRQAFLDLAEPGGAAGSAEAAPPPGQPPQVVANGP--------GSGPPPPAGGAGSRDAL 557
Query: 949 HPIPPQG-------GKLEIAGMVVGQWAGSRSSRGRGSFGMQVVSVGGPGKGHGKEQTGR 1001
PP G G A V AG+ ++ G G G +V + P G+ + G
Sbjct: 558 FESPPGGSGGDCSAGSTPPADSVAAAGAGA-AAAGSGPAGSRVPAPHHPHLLEGR-KAGG 615
Query: 1002 GSKGHKKGNKQ-GSSDGVSKSLELH 1025
GS H + G D +LH
Sbjct: 616 GSYHHSSAFRPVGGKDDAESLAKLH 640
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 46.2 bits (108), Expect = 2e-04
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Query: 52 GAPRAARGSVPLQPPLPP-AALGA-----YSGGAGPIRHHHPAHHFHHHGQAQPGLHPPL 105
G P A P PP +G+ Y G P HHHP HH HHH H
Sbjct: 959 GGPLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHA 1018
Query: 106 PPPPPPQL 113
PP PP++
Sbjct: 1019 HPPHPPEM 1026
>gi|31657109 zinc finger protein 282 [Homo sapiens]
Length = 671
Score = 45.4 bits (106), Expect = 3e-04
Identities = 56/207 (27%), Positives = 75/207 (36%), Gaps = 29/207 (14%)
Query: 899 MNHPPPSALLPSPTFVPPMVPSLY----PVSLYSRAMGSMPLPPQGRSRGFAGLHPIPPQ 954
+ +PPP+ P P PP P L P SL A+ P P R G +P +
Sbjct: 400 VKNPPPAPPQPQPQPQPPQ-PQLQSQPQPQSLPPIAVAENPGGPPSRGLLDDGFQVLPGE 458
Query: 955 GGKLEIAGMVVGQWAGSRSSRGRGSFGMQVVSVGGPGKGHGKEQTGRGSKGHKKGNKQGS 1014
G E G RS+ G G G G G G + G G+ G G
Sbjct: 459 RGSGEAPP------GGDRSTGGGGGDG---------GGGGGGAEAGTGAGG---GCGSCC 500
Query: 1015 SDGVSKSLELHQGRSRSQVNGNSGALIKEEKS------DHRLPAPSQCALSRDSNECNNG 1068
G+ +SL LH RS+ G KS H P +CA S C++G
Sbjct: 501 PGGLRRSLLLHGARSKPYSCPECGKSFGVRKSLIIHHRSHTKERPYECAECEKSFNCHSG 560
Query: 1069 NRYLPMNNREKNHLQEQKLETVAQRKE 1095
M +R + + + E RKE
Sbjct: 561 LIRHQMTHRGERPYKCSECEKTYSRKE 587
>gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens]
Length = 949
Score = 45.4 bits (106), Expect = 3e-04
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 48 ALAPGAPRAARGSVPLQPPLPPAALGAYSGGAGP---IRHHHPAHHFHHHGQAQPGLHPP 104
A P P A S P +P ++ + SGG G I +P HH HHH Q P PP
Sbjct: 721 ATLPSCP--APSSSPALSSVPESSFYSSSGGGGSTGNIPASNPNHHHHHHHQQPPA--PP 776
Query: 105 LPPPPPP 111
P PPPP
Sbjct: 777 QPAPPPP 783
>gi|51702521 POU domain, class 3, transcription factor 2 [Homo
sapiens]
Length = 443
Score = 43.9 bits (102), Expect = 8e-04
Identities = 34/110 (30%), Positives = 41/110 (37%), Gaps = 27/110 (24%)
Query: 32 RQQQQQHLHRQLPPTAAL-------APGAPRAARGSVPLQPPLPPAALGAY--------- 75
+QQQQQ +Q PP PGA R+A + L P + + G
Sbjct: 139 QQQQQQQQQQQRPPHLVHHAANHHPGPGAWRSAAAAAHLPPSMGASNGGLLYSQPSFTVN 198
Query: 76 ----SGGAGPIRHHH-------PAHHFHHHGQAQPGLHPPLPPPPPPQLP 114
+GG HHH HH HH H PPPPPPQ P
Sbjct: 199 GMLGAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQQPPPPPPPQGP 248
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 43.9 bits (102), Expect = 8e-04
Identities = 35/104 (33%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 32 RQQQQQHLHRQLPPTAAL--APGAPRAARGS-------------VPLQPPLPPAALGAYS 76
R Q + LH Q PP P AP + VP PP+PP+A G
Sbjct: 35 RPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLP 94
Query: 77 GGAGPIRHHHPAHHFHHHGQAQPGLHPPLPPPPP----PQLPGA 116
PIR P H H P PP+PPP P P +PGA
Sbjct: 95 --PCPIRPPFPNHQMRHPFPVPP-CFPPMPPPMPCPNNPPVPGA 135
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 43.9 bits (102), Expect = 8e-04
Identities = 35/104 (33%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 32 RQQQQQHLHRQLPPTAAL--APGAPRAARGS-------------VPLQPPLPPAALGAYS 76
R Q + LH Q PP P AP + VP PP+PP+A G
Sbjct: 35 RPQNLRLLHPQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLP 94
Query: 77 GGAGPIRHHHPAHHFHHHGQAQPGLHPPLPPPPP----PQLPGA 116
PIR P H H P PP+PPP P P +PGA
Sbjct: 95 --PCPIRPPFPNHQMRHPFPVPP-CFPPMPPPMPCPNNPPVPGA 135
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 43.9 bits (102), Expect = 8e-04
Identities = 30/93 (32%), Positives = 34/93 (36%), Gaps = 23/93 (24%)
Query: 58 RGSVPLQPPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQAQPGL---------------- 101
RG P Q P PP + S + HHH HH HHHG + GL
Sbjct: 1213 RGKGPFQMPPPPTGQASASSSSASSTHHH--HHHHHHGHSHGGLGVLPDGQSKLQALHAQ 1270
Query: 102 --HPPLPPPPP---PQLPGARVLVDAGSALPRL 129
P P PPP PQ P LP+L
Sbjct: 1271 YCQGPGPAPPPYLPPQQPSLPPPPQQPPPLPQL 1303
Score = 30.8 bits (68), Expect = 7.3
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 7/52 (13%)
Query: 65 PPLPPAALGAYSGGAGP-----IRHHHPAHHFHHHGQAQPGLHPPLPPPPPP 111
P + PAA A G+ P HHP H P HP PP PPP
Sbjct: 1394 PQMMPAAGAAGGPGSRPPGGSYSHPHHPQSPLSPHSPIPP--HPSYPPLPPP 1443
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 43.9 bits (102), Expect = 8e-04
Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 44 PPTAALAPGAPRAARGSVPLQPPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHP 103
PP+ A PRA R + PP PAA A + AGP R P A P
Sbjct: 159 PPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPP---------AVAAREP 209
Query: 104 PLPPPPPPQLP 114
PLPPPP P P
Sbjct: 210 PLPPPPQPPAP 220
Score = 35.8 bits (81), Expect = 0.23
Identities = 41/160 (25%), Positives = 61/160 (38%), Gaps = 20/160 (12%)
Query: 902 PPPSALLPSPTFVPPMVPSLYPVSLYSRAMGSMPLPPQGRSRGFAGLHP-----IPPQGG 956
PPP+ P P PP P P + +P PPQ + P PP+GG
Sbjct: 180 PPPAPAAP-PAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGG 238
Query: 957 KLEIAGM--------VVGQWAGSRSSRGRGSFGMQVVSVGGPGKGHGK-EQTGRGSKGHK 1007
+ G VV GS + GR + G + G+ E+T G+
Sbjct: 239 AVRAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALP 298
Query: 1008 KGNKQGSSDGVSKSLELHQGRSRSQVNGNSGALIKEEKSD 1047
+G++ G + + + SRS+ G L KEE+ D
Sbjct: 299 RGDRPGRAPPAASARP-----SRSKRGGEERVLEKEEEED 333
Score = 33.5 bits (75), Expect = 1.1
Identities = 29/90 (32%), Positives = 32/90 (35%), Gaps = 15/90 (16%)
Query: 42 QLPPTAALAPGAPRAARGSVPL----------QPPLPPAALGAYSGGAGPIRHHHPAHHF 91
Q P A P PRA RG+ PP PPA + A + P A
Sbjct: 100 QPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAP 159
Query: 92 HHHGQAQPG-----LHPPLPPPPPPQLPGA 116
G AQPG P PPP P P A
Sbjct: 160 PSPGPAQPGPRAQRAAPLAAPPPAPAAPPA 189
Score = 30.8 bits (68), Expect = 7.3
Identities = 30/88 (34%), Positives = 32/88 (36%), Gaps = 19/88 (21%)
Query: 44 PPTAALAP-GAPRAARGSVPLQ---PPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQAQP 99
PP AP GAP AA + P PP PPA + A A P R A
Sbjct: 108 PPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAA----AAPARAPRAA----------- 152
Query: 100 GLHPPLPPPPPPQLPGARVLVDAGSALP 127
PP P P PG R A A P
Sbjct: 153 AAAATAPPSPGPAQPGPRAQRAAPLAAP 180
>gi|124107614 PR domain containing 13 [Homo sapiens]
Length = 707
Score = 42.7 bits (99), Expect = 0.002
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 68 PPAALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHPPLPPPPPPQLP 114
P + + +GGAG HHH HH HHH + L PPPPPP LP
Sbjct: 339 PGSGENSAAGGAG--HHHH--HHAHHHHHPKCLLAGDPPPPPPPGLP 381
Score = 30.8 bits (68), Expect = 7.3
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 37 QHLHRQLPPTAALAPGAPRAA---RGSVPLQ----PPLPPAALGAYSGG 78
+H+ R PP AA PGA A +PL+ PPL P L AY GG
Sbjct: 403 KHVERA-PPAAAALPGARYAQLPPAPGLPLERCALPPLDPGGLKAYPGG 450
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 42.4 bits (98), Expect = 0.002
Identities = 35/97 (36%), Positives = 39/97 (40%), Gaps = 30/97 (30%)
Query: 47 AALAPGAPRAARGSVPLQPP--------------LPPAALGAYSGGAGPIR------HHH 86
AA PG+P AA L P LPP + +Y+G GP H H
Sbjct: 232 AAAGPGSPGAAAVVKGLAGPAASYGPYTRVQSMALPPGVVNSYNGLGGPPAAPPPPPHPH 291
Query: 87 PAHHFHH-HGQAQPGLHPPLPP------PPPPQLPGA 116
P H HH H A P PP PP PPP QL A
Sbjct: 292 PHPHAHHLHAAAAP---PPAPPHHGAAAPPPGQLSPA 325
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 42.0 bits (97), Expect = 0.003
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 939 QGRSRGFAGLHPIPPQGGKLEIAGMVVGQWAGSRSSRGRGSFGMQVVSVGGPGKGHGKEQ 998
Q SRG +G GG + G G +G R G GS G +S GG G G GK
Sbjct: 545 QSGSRGGSG------GGGSISGGGYGSGGGSGGRYGSGGGSKGGS-ISGGGYGSGGGKHS 597
Query: 999 TGRGSK-GHKKGNKQGSSDGVSKSLELHQGRS 1029
+G GS+ G G GS G S S++ G +
Sbjct: 598 SGGGSRGGSSSGGGYGSGGGGSSSVKGSSGEA 629
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 41.2 bits (95), Expect = 0.005
Identities = 33/101 (32%), Positives = 37/101 (36%), Gaps = 34/101 (33%)
Query: 43 LPPTAALAPGAPRAARGSVPLQPPLPPAALGAYSGGAGPIRHHHPAH-HFHHH-----GQ 96
+PP AL PG P A PP+PP A G AG HP H H H H G
Sbjct: 247 VPPPGALPPGIPPAMP-----PPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGM 301
Query: 97 AQPGL--------------HPPLPPP---------PPPQLP 114
PG+ HP PP PPP +P
Sbjct: 302 PHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMP 342
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 41.2 bits (95), Expect = 0.005
Identities = 18/31 (58%), Positives = 18/31 (58%), Gaps = 6/31 (19%)
Query: 85 HHPAHHFHHHGQAQPGLHPPLP---PPPPPQ 112
HHP HH HHH HPP P PPPPPQ
Sbjct: 43 HHPQHHHHHHHHHH---HPPPPAPQPPPPPQ 70
Score = 40.0 bits (92), Expect = 0.012
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Query: 81 PIRHHHPAHHFHHHGQAQPGLHPP----LPPPPPPQLP 114
P HHH HH HH P PP PPPPPP P
Sbjct: 45 PQHHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPPPAP 82
Score = 39.7 bits (91), Expect = 0.016
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 8/43 (18%)
Query: 83 RHHHPAHHFHHHGQA---QPG-----LHPPLPPPPPPQLPGAR 117
+HHH HH HHH QP PP PPPP PQ P R
Sbjct: 46 QHHHHHHHHHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTR 88
Score = 38.9 bits (89), Expect = 0.027
Identities = 15/29 (51%), Positives = 15/29 (51%)
Query: 84 HHHPAHHFHHHGQAQPGLHPPLPPPPPPQ 112
HH HH HHH P P PPPPP Q
Sbjct: 43 HHPQHHHHHHHHHHHPPPPAPQPPPPPQQ 71
Score = 34.7 bits (78), Expect = 0.51
Identities = 26/81 (32%), Positives = 30/81 (37%), Gaps = 14/81 (17%)
Query: 38 HLHRQLPPTAALAPGAPRAARGSVPLQP-PLPPAALGAYSGGAGPIRHHHPAHHFHHHGQ 96
H H PP A P P+ + P P P PP GA + G
Sbjct: 53 HHHHHPPPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAAD-------------DDKGP 99
Query: 97 AQPGLHPPLPPPPPPQLPGAR 117
Q L PP PPPP L GA+
Sbjct: 100 QQLLLPPPPPPPPAAALDGAK 120
Score = 32.0 bits (71), Expect = 3.3
Identities = 38/132 (28%), Positives = 49/132 (37%), Gaps = 35/132 (26%)
Query: 900 NHPPPSALLPSPTFVPPMVPSLYPVSLYSRAMGSMPLPPQGRSRGFAG---------LHP 950
+HPPP A P P P P + P PPQ R A L P
Sbjct: 56 HHPPPPAPQPPPPPQQQQPPPPPPPA---------PQPPQTRGAPAADDDKGPQQLLLPP 106
Query: 951 IPPQGGKLEIAGMVVGQWAGSRSSRGRGSFGMQVVSVGGPGK----GHGKEQTGRGSKG- 1005
PP + G A + G+G G GGPG+ G +++ G G+ G
Sbjct: 107 PPPPPPAAALDG------AKADGLGGKGEPG------GGPGELAPVGPDEKEKGAGAGGE 154
Query: 1006 HKKGNKQGSSDG 1017
KKG +G DG
Sbjct: 155 EKKGAGEGGKDG 166
>gi|66730481 neuregulin 3 [Homo sapiens]
Length = 696
Score = 40.8 bits (94), Expect = 0.007
Identities = 53/200 (26%), Positives = 79/200 (39%), Gaps = 22/200 (11%)
Query: 356 VVIKAVSEYVSSIKDPSNLDVVGKDVFKQSQSRTEDKIERFKKAVEYYSVTTKLSSLPVG 415
+V+ +V EYV + D + +G+D F S K F KA+E + TT +S P
Sbjct: 89 IVVGSVKEYVPT--DLVDSKGMGQDPFFLS------KPSSFPKAMETTTTTTSTTS-PAT 139
Query: 416 PSFLGFRNNRLGNPPLPRNQVGTISAGKPMF-SHQVPQKVK--------YPPPFPVGPNS 466
PS G ++R N R + TI+ F H+VP + P V +
Sbjct: 140 PSAGGAASSRTPNRISTR--LTTITRAPTRFPGHRVPIRASPRSTTARNTAAPATVPSTT 197
Query: 467 SLLFSSHALGESHAFSEDPMLQNSPFANWAVSYDSSASQFPNYLPSKASPPLGPDSSHSS 526
+ FSS LG P Q P +W + +++S + PS P +S SS
Sbjct: 198 APFFSSSTLGSRPPVPGTPSTQAMP--SWPTAAYATSSYLHDSTPSWTLSPFQDAASSSS 255
Query: 527 SSDGDEPNGASSDHITEAFH 546
SS + FH
Sbjct: 256 SSSSSATTTTPETSTSPKFH 275
>gi|22027622 TNF receptor-associated factor 4 [Homo sapiens]
Length = 470
Score = 40.8 bits (94), Expect = 0.007
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 529 DGDEPNGASSDHITEAFHHQPEWGNPNRDRGSWAQPVDTGVSEASLGDGEPHIPSLLSMS 588
D +P A H+TE FH P W N + G+W +D E+SLG G P S +
Sbjct: 392 DQSDPGLAKPQHVTETFHPDPNWKNFQKP-GTWRGSLD----ESSLGFGYPKFISHQDIR 446
Query: 589 TRNHM 593
RN++
Sbjct: 447 KRNYV 451
>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
Length = 2365
Score = 40.8 bits (94), Expect = 0.007
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 20/105 (19%)
Query: 32 RQQQQQHLHRQLPPTAALAPGAPRAARGSVPLQP-PLPPAALGAYSGGAGPIRHHHPAHH 90
+Q Q+QHL LPP + GAP + P Q P+ P A P + H PA H
Sbjct: 131 QQPQKQHLSSPLPPAVSQVAGAPSQCQAGTPQQQVPVTPQA---------PCQPHQPAPH 181
Query: 91 FHHHGQAQPGLHPPLPPPPPPQLPGARVLVDAGSALPRLYGGYQT 135
QA+ +LPG V A + + GG T
Sbjct: 182 QQSKAQAE----------MQSRLPGPTARVSAAGSEAKTRGGSTT 216
>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
Length = 2432
Score = 40.8 bits (94), Expect = 0.007
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 20/105 (19%)
Query: 32 RQQQQQHLHRQLPPTAALAPGAPRAARGSVPLQP-PLPPAALGAYSGGAGPIRHHHPAHH 90
+Q Q+QHL LPP + GAP + P Q P+ P A P + H PA H
Sbjct: 195 QQPQKQHLSSPLPPAVSQVAGAPSQCQAGTPQQQVPVTPQA---------PCQPHQPAPH 245
Query: 91 FHHHGQAQPGLHPPLPPPPPPQLPGARVLVDAGSALPRLYGGYQT 135
QA+ +LPG V A + + GG T
Sbjct: 246 QQSKAQAE----------MQSRLPGPTARVSAAGSEAKTRGGSTT 280
>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
Length = 2429
Score = 40.8 bits (94), Expect = 0.007
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 20/105 (19%)
Query: 32 RQQQQQHLHRQLPPTAALAPGAPRAARGSVPLQP-PLPPAALGAYSGGAGPIRHHHPAHH 90
+Q Q+QHL LPP + GAP + P Q P+ P A P + H PA H
Sbjct: 195 QQPQKQHLSSPLPPAVSQVAGAPSQCQAGTPQQQVPVTPQA---------PCQPHQPAPH 245
Query: 91 FHHHGQAQPGLHPPLPPPPPPQLPGARVLVDAGSALPRLYGGYQT 135
QA+ +LPG V A + + GG T
Sbjct: 246 QQSKAQAE----------MQSRLPGPTARVSAAGSEAKTRGGSTT 280
>gi|189027090 cytoplasmic polyadenylation element binding protein 4
[Homo sapiens]
Length = 729
Score = 40.8 bits (94), Expect = 0.007
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 69 PAALGAYSGGAGPIRHHHP--AHHFHHHGQAQPGLHPPLPPPPPP 111
P G++S GP+ HHP H HHH Q Q P P PPP
Sbjct: 216 PGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPP 260
>gi|169636435 caudal type homeobox 2 [Homo sapiens]
Length = 313
Score = 40.4 bits (93), Expect = 0.009
Identities = 29/66 (43%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 50 APGAPRAARGSVP--LQPPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQA---QPGLHPP 104
APG AA +V L P AA+G YS A HHHP HH HH A GL
Sbjct: 81 APGGAAAAANAVAHGLNGGSPAAAMG-YSSPADYHPHHHPHHHPHHPAAAPSCASGLLQT 139
Query: 105 LPPPPP 110
L P PP
Sbjct: 140 LNPGPP 145
Score = 30.4 bits (67), Expect = 9.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 96 QAQPGLHPPLPPPPPPQLP 114
Q Q PP PPPPPPQ P
Sbjct: 250 QQQQQQQPPQPPPPPPQPP 268
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 40.4 bits (93), Expect = 0.009
Identities = 28/72 (38%), Positives = 32/72 (44%), Gaps = 17/72 (23%)
Query: 44 PPTAALAPGAPRAARGSVPLQPPLPPAALGAYSGGAGPIRHHHPAHHFHHHGQAQPGLHP 103
PPT G P RG P PP PPA +G +GP+ P G P + P
Sbjct: 353 PPTPR---GPPPPGRGGPP--PPPPPA-----TGRSGPLPPPPP-------GAGGPPMPP 395
Query: 104 PLPPPPPPQLPG 115
P PPPPPP G
Sbjct: 396 PPPPPPPPPSSG 407
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,646,108
Number of Sequences: 37866
Number of extensions: 2903419
Number of successful extensions: 22520
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 471
Number of HSP's that attempted gapping in prelim test: 17293
Number of HSP's gapped (non-prelim): 4261
length of query: 1096
length of database: 18,247,518
effective HSP length: 113
effective length of query: 983
effective length of database: 13,968,660
effective search space: 13731192780
effective search space used: 13731192780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.