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Search of human proteins with 156564372
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156564372 hypothetical protein LOC113828 [Homo sapiens]
(500 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156564372 hypothetical protein LOC113828 [Homo sapiens] 998 0.0
gi|115392150 hypothetical protein LOC644815 [Homo sapiens] 286 2e-77
gi|153251792 hypothetical protein LOC54854 [Homo sapiens] 211 2e-54
gi|116235448 hypothetical protein LOC81610 [Homo sapiens] 181 2e-45
gi|157311635 FAM83H [Homo sapiens] 167 2e-41
gi|61676089 hypothetical protein LOC222584 [Homo sapiens] 167 3e-41
gi|46255017 hypothetical protein LOC84985 isoform b [Homo sapiens] 161 1e-39
gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens] 161 1e-39
gi|30425394 hypothetical protein LOC128876 [Homo sapiens] 154 2e-37
gi|167555125 low density lipoprotein receptor-related protein 3 ... 38 0.019
gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens] 37 0.055
gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens] 37 0.055
gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens] 35 0.12
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 35 0.12
gi|33598929 scavenger receptor class F, member 1 isoform 1 precu... 34 0.27
gi|145309306 scavenger receptor class F, member 1 isoform 5 prec... 34 0.27
gi|4503993 growth hormone receptor precursor [Homo sapiens] 33 0.79
gi|112382244 proto-oncogene tyrosine-protein kinase FGR [Homo sa... 33 0.79
gi|112382241 proto-oncogene tyrosine-protein kinase FGR [Homo sa... 33 0.79
gi|4885235 proto-oncogene tyrosine-protein kinase FGR [Homo sapi... 33 0.79
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 33 0.79
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 33 0.79
gi|42794779 myosin 18A isoform b [Homo sapiens] 32 1.0
gi|156104869 chloride channel 2 [Homo sapiens] 32 1.8
gi|94681038 phospholipase D4 [Homo sapiens] 32 1.8
gi|216547801 SH2 domain containing 3C isoform e [Homo sapiens] 32 1.8
gi|216547790 SH2 domain containing 3C isoform d [Homo sapiens] 32 1.8
gi|216547779 SH2 domain containing 3C isoform c [Homo sapiens] 32 1.8
gi|216547769 SH2 domain containing 3C isoform c [Homo sapiens] 32 1.8
gi|216547763 SH2 domain containing 3C isoform b [Homo sapiens] 32 1.8
>gi|156564372 hypothetical protein LOC113828 [Homo sapiens]
Length = 500
Score = 998 bits (2580), Expect = 0.0
Identities = 500/500 (100%), Positives = 500/500 (100%)
Query: 1 MAESQLNCLDEAHVNEKVTEAQAAFYYCERRRAALEALLGGGEQAYRERLKEEQLRDFLS 60
MAESQLNCLDEAHVNEKVTEAQAAFYYCERRRAALEALLGGGEQAYRERLKEEQLRDFLS
Sbjct: 1 MAESQLNCLDEAHVNEKVTEAQAAFYYCERRRAALEALLGGGEQAYRERLKEEQLRDFLS 60
Query: 61 SPERQALRAAWSPYEDAVPAANARGKSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLD 120
SPERQALRAAWSPYEDAVPAANARGKSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLD
Sbjct: 61 SPERQALRAAWSPYEDAVPAANARGKSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLD 120
Query: 121 LGWTDTGFYRGVSRVTLFTHPPKDEKAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQD 180
LGWTDTGFYRGVSRVTLFTHPPKDEKAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQD
Sbjct: 121 LGWTDTGFYRGVSRVTLFTHPPKDEKAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQD 180
Query: 181 IVDAACKRRVPVYIILDEAGVKYFLEMCQDLQLTDFRIRNIRVRSVTGVGFYMPMGRIKG 240
IVDAACKRRVPVYIILDEAGVKYFLEMCQDLQLTDFRIRNIRVRSVTGVGFYMPMGRIKG
Sbjct: 181 IVDAACKRRVPVYIILDEAGVKYFLEMCQDLQLTDFRIRNIRVRSVTGVGFYMPMGRIKG 240
Query: 241 TLSSRFLMVDGDKVATGSYRFTWSSSHVDRNLLLLLTGQNVEPFDTEFRELYAISEEVDL 300
TLSSRFLMVDGDKVATGSYRFTWSSSHVDRNLLLLLTGQNVEPFDTEFRELYAISEEVDL
Sbjct: 241 TLSSRFLMVDGDKVATGSYRFTWSSSHVDRNLLLLLTGQNVEPFDTEFRELYAISEEVDL 300
Query: 301 YRQLSLAGRVGLHYSSTVARKLINPKYALVSGCRHPPGEMMRWAARQQREAGGNPEGQEE 360
YRQLSLAGRVGLHYSSTVARKLINPKYALVSGCRHPPGEMMRWAARQQREAGGNPEGQEE
Sbjct: 301 YRQLSLAGRVGLHYSSTVARKLINPKYALVSGCRHPPGEMMRWAARQQREAGGNPEGQEE 360
Query: 361 GASGGESAWRLESFLKDLVTVEQVLPPVEPIPLGELSQKDGRMVSHMHRDLKPKSREAPS 420
GASGGESAWRLESFLKDLVTVEQVLPPVEPIPLGELSQKDGRMVSHMHRDLKPKSREAPS
Sbjct: 361 GASGGESAWRLESFLKDLVTVEQVLPPVEPIPLGELSQKDGRMVSHMHRDLKPKSREAPS 420
Query: 421 RNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGMASSVSTETSEVEFLTGKRPNENSS 480
RNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGMASSVSTETSEVEFLTGKRPNENSS
Sbjct: 421 RNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGMASSVSTETSEVEFLTGKRPNENSS 480
Query: 481 ADISGKTSPSSAKPSNCVIS 500
ADISGKTSPSSAKPSNCVIS
Sbjct: 481 ADISGKTSPSSAKPSNCVIS 500
>gi|115392150 hypothetical protein LOC644815 [Homo sapiens]
Length = 823
Score = 286 bits (733), Expect = 2e-77
Identities = 160/353 (45%), Positives = 216/353 (61%), Gaps = 24/353 (6%)
Query: 1 MAESQLNCLDEAHVNEKVTEAQAAFYYCERRRAALEALLGGGEQAYRERLKEEQLRDFLS 60
MA SQ+ CLD+ HVN + +E++ F+Y E +R ALEAL+ G A+ E LK E +RDFLS
Sbjct: 1 MAFSQVQCLDDNHVNWRSSESKPEFFYSEEQRLALEALVARGRDAFYEVLKRENIRDFLS 60
Query: 61 SPERQALRAAWSPYEDAVPAANARGKSK------------AKAKAPAPAPAESGESLAYW 108
E + + Y+ G S+ A P AE SL YW
Sbjct: 61 ELELKRILETIEVYDPGSEDPRGTGPSQGPEDNGVGDGEEASGADGVPIEAEPLPSLEYW 120
Query: 109 PDRSDTEVPPLDLGWTDTGFYRGVSRVTLFTHPPKDEKAPHLKQVVRQMIQQAQKVIAVV 168
P +SD +P LDLGW DT YRGV+R +++ PP D +A H+K+VVR+MI QAQKVIAVV
Sbjct: 121 PQKSDRSIPQLDLGWPDTIAYRGVTRASVYMQPPIDGQA-HIKEVVRKMISQAQKVIAVV 179
Query: 169 MDLFTDGDIFQDIVDAACKRRVPVYIILDEAGVKYFLEMCQDLQLTDFRIRNIRVRSVTG 228
MD+FTD DIF+D++DA KR+V VYII+DE+ VKYFL MC+ + ++N+RVRS G
Sbjct: 180 MDMFTDVDIFKDLLDAGFKRKVAVYIIVDESNVKYFLHMCERACMHLGHLKNLRVRSSGG 239
Query: 229 VGFYMPMG-RIKGTLSSRFLMVDGDKVATGSYRFTWSSSHVDRNLLLLLTGQNVEPFDTE 287
F+ + KG L+ +F+ VDGD+ GSY FTWS++ DRN++ +L+GQ VE FD +
Sbjct: 240 TEFFTRSATKFKGALAQKFMFVDGDRAVCGSYSFTWSAARTDRNVISVLSGQVVEMFDRQ 299
Query: 288 FRELYAISEEVDLY----------RQLSLAGRVGLHYSSTVARKLINPKYALV 330
F+ELY +S V L + L V L + TVA+KL+NPKYALV
Sbjct: 300 FQELYLMSHSVSLKGIPMEKEPEPEPIVLPSVVPLVPAGTVAKKLVNPKYALV 352
>gi|153251792 hypothetical protein LOC54854 [Homo sapiens]
Length = 478
Score = 211 bits (536), Expect = 2e-54
Identities = 121/296 (40%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 1 MAESQLNCLDEAHVNEKVTEAQAAFYYCERRRAALEALLGGGEQAYRERLKEEQLRDFLS 60
MA SQL L+ +V A F Y E +R ALEALL G +A++ ++ E+L FLS
Sbjct: 1 MAASQLAALEGVDSGPRVPGASPGFLYSEGQRLALEALLSKGAEAFQTCVQREELWPFLS 60
Query: 61 SPERQALRAAWSPYEDAVPAANARGKSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLD 120
+ E Q L AA + A+ + A+ ++G SL+YWP +S+ P L
Sbjct: 61 ADEVQGLAAAAEDW------TVAKQEPSGMAEGATTTDVDAG-SLSYWPGQSEQPAPVLR 113
Query: 121 LGWTDTGFYRGVSRVTLFTHPPKDEKAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQD 180
LGW ++G++R L+T PP E P LK++VR IQ A K++AVVMD+FTD D+ D
Sbjct: 114 LGWPVDSAWKGITRAQLYTQPP-GEGQPPLKELVRLEIQAAHKLVAVVMDVFTDPDLLLD 172
Query: 181 IVDAACKRRVPVYIILDEAGVKYFLEMCQDLQLTDFRIRNIRVRSVTGVGFYMPMGR-IK 239
+VDAA +R VPVY++LD + FLE+ Q L + + N+ VR V G F R +
Sbjct: 173 LVDAATRRWVPVYLLLDRQQLPAFLELAQQLGVNPWNTENVDVRVVRGCSFQSRWRRQVS 232
Query: 240 GTLSSRFLMVDGDKVATGSYRFTWSSSHVDRNLLLLLTGQNVEPFDTEFRELYAIS 295
GT+ +F+++DG++V +GSY FTWS + + R L+ LLTG+ V+ F EFR LYA S
Sbjct: 233 GTVREKFVLLDGERVISGSYSFTWSDARLHRGLVTLLTGEIVDAFSLEFRTLYAAS 288
>gi|116235448 hypothetical protein LOC81610 [Homo sapiens]
Length = 615
Score = 181 bits (458), Expect = 2e-45
Identities = 116/278 (41%), Positives = 168/278 (60%), Gaps = 14/278 (5%)
Query: 27 YCERRRAALEALLGGGEQAYRERLKEEQLRDFLSSPERQA-LRAAWSPYEDAVPAANARG 85
+ E RR ALE L+ GG +A+ L+ E+L FL+ E A LRAA P E+ AA A
Sbjct: 58 FSESRRLALEELVAGGPEAFAAFLRRERLARFLNPDEVHAILRAAERPGEEGAAAAAAAE 117
Query: 86 KSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLDLGWTD--TGFYRGVSRV-TLFTHPP 142
S + SG Y+P++SD E P L+LGW G YRG +RV T F
Sbjct: 118 DSFGSSH-----DCSSG---TYFPEQSDLEPPLLELGWPAFYQGAYRGATRVETHFQPRG 169
Query: 143 KDEKAPH-LKQVVRQMIQQAQKVIAVVMDLFTDGDIFQDIVDAACKRRVPVYIILDEAGV 201
E P+ K +RQ ++ A++VIAVVMD+FTD DIF+D+ + K+ V VYI+LD+A +
Sbjct: 170 AGEGGPYGCKDALRQQLRSAREVIAVVMDVFTDIDIFRDLQEICRKQGVAVYILLDQALL 229
Query: 202 KYFLEMCQDLQLTDFRIRNIRVRSVTGVGFYMPMG-RIKGTLSSRFLMVDGDKVATGSYR 260
FL+MC DL++ + + + VR++TG +Y G +I G + +F ++DG +VATGSY
Sbjct: 230 SQFLDMCMDLKVHPEQEKLMTVRTITGNIYYARSGTKIIGKVHEKFTLIDGIRVATGSYS 289
Query: 261 FTWSSSHVDRNLLLLLTGQNVEPFDTEFRELYAISEEV 298
FTW+ ++ + L++L+GQ VE FD EFR LYA S+ +
Sbjct: 290 FTWTDGKLNSSNLVILSGQVVEHFDLEFRILYAQSKPI 327
>gi|157311635 FAM83H [Homo sapiens]
Length = 1179
Score = 167 bits (423), Expect = 2e-41
Identities = 103/272 (37%), Positives = 147/272 (54%), Gaps = 13/272 (4%)
Query: 26 YYCERRRAALEALLGGGEQAYRERLKEEQLRDFLSSPERQALRAAWSPYEDAVPAANARG 85
+Y E R A++AL GG +AY L E DFL E + + P +
Sbjct: 23 HYKEYYRLAVDALAEGGSEAYSRFLATEGAPDFLCPEELEHVSRHLRPPQYV-------- 74
Query: 86 KSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLDLGWTDTGFYRGVSRVTLFTHPPKDE 145
++ + G S YWP SD VP LDLGW T ++G TL PP D
Sbjct: 75 -TREPPEGSLLDVDMDGSSGTYWPVNSDQAVPELDLGWPLTFGFQGTEVTTLVQPPPPD- 132
Query: 146 KAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQDIVDAACKRRVPVYIILDEAGVKYFL 205
+P +K R+MI+ AQ+V+AVVMD+FTD D+ ++++AA RRVPVYI+LDE ++FL
Sbjct: 133 -SPSIKDEARRMIRSAQQVVAVVMDMFTDVDLLSEVLEAAA-RRVPVYILLDEMNAQHFL 190
Query: 206 EMCQDLQLTDFRIRNIRVRSVTGVGFYMPMGR-IKGTLSSRFLMVDGDKVATGSYRFTWS 264
+M ++ + +RVR+V G +Y G+ KG + +FL+VD V +GSY F WS
Sbjct: 191 DMADKCRVNLHHVDFLRVRTVAGPTYYCRTGKSFKGHVKEKFLLVDCAVVMSGSYSFMWS 250
Query: 265 SSHVDRNLLLLLTGQNVEPFDTEFRELYAISE 296
+ R+L + G+ V FD EFR L+A SE
Sbjct: 251 FEKIHRSLAHVFQGELVSSFDEEFRILFAQSE 282
>gi|61676089 hypothetical protein LOC222584 [Homo sapiens]
Length = 1011
Score = 167 bits (422), Expect = 3e-41
Identities = 104/273 (38%), Positives = 156/273 (57%), Gaps = 18/273 (6%)
Query: 26 YYCERRRAALEALLGGGEQAYRERLKEEQLRDFLSSPERQALRAAWSPYEDAVPAANARG 85
+Y E R A++ L+ G +AY+E L +E++ DFL+ E + N +
Sbjct: 23 HYKEWYRVAIDILIEHGLEAYQEFLVQERVSDFLAEEEINYI------------LKNVQK 70
Query: 86 KSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLDLGWTDT--GFYRGVSRVTLFTHPPK 143
+++ A + ++ S YWP SD E P LDLGW G G + + L HPP+
Sbjct: 71 VAQSTAHGTDDSCDDTLSSGTYWPVESDVEAPNLDLGWPYVMPGLLGG-THIDLLFHPPR 129
Query: 144 DEKAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQDIVDAACKRRVPVYIILDEAGVKY 203
+K+ +R+MI++A+KVIA+VMD+FTD DIF++IV+A+ R V VYI+LDE+ +
Sbjct: 130 AHLLT-IKETIRKMIKEARKVIALVMDIFTDVDIFKEIVEAST-RGVSVYILLDESNFNH 187
Query: 204 FLEMCQDLQLTDFRIRNIRVRSVTGVGFYMPMG-RIKGTLSSRFLMVDGDKVATGSYRFT 262
FL M + + R+RNIRVR+V G + G + G + +FL+VD KV GSY +
Sbjct: 188 FLNMTEKQGCSVQRLRNIRVRTVKGQDYLSKTGAKFHGKMEQKFLLVDCQKVMYGSYSYM 247
Query: 263 WSSSHVDRNLLLLLTGQNVEPFDTEFRELYAIS 295
WS +++ ++TGQ VE FD EFR LYA S
Sbjct: 248 WSFEKAHLSMVQIITGQLVESFDEEFRTLYARS 280
>gi|46255017 hypothetical protein LOC84985 isoform b [Homo sapiens]
Length = 367
Score = 161 bits (408), Expect = 1e-39
Identities = 108/284 (38%), Positives = 157/284 (55%), Gaps = 12/284 (4%)
Query: 18 VTEAQAAFYYCERRRAALEALLGGGEQAYRERLKEEQLRDFLSSPERQALRAAWSPYEDA 77
V A+A F E R A +ALL GG +AY L +E DFLSS E Q ++A E
Sbjct: 22 VRPARADFSDNESARLATDALLDGGSEAYWRVLSQEGEVDFLSSVEAQYIQA--QAREPP 79
Query: 78 VPAANARGKSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLDLGWT--DTGFYRGVSRV 135
P + G ++A K + +SG Y+P S+ P L W + + + S
Sbjct: 80 CPP-DTLGGAEAGPKGLDSSSLQSG---TYFPVASEGSEPALLHSWASAEKPYLKEKSSA 135
Query: 136 TLFTHPPKDEKAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQDIVDAACKRRVPVYII 195
T++ K +++ +VR+ I + +V+ ++MD+FTD +IF DI++AA KR V V ++
Sbjct: 136 TVYFQTVKHN---NIRDLVRRCITRTSQVLVILMDVFTDVEIFCDILEAANKRGVFVCVL 192
Query: 196 LDEAGVKYFLEMCQDLQLTDFRIRNIRVRSVTGVGFYMPMGR-IKGTLSSRFLMVDGDKV 254
LD+ GVK F EMC +Q++D ++NI +RSV G + GR G + +F++ D V
Sbjct: 193 LDQGGVKLFQEMCDKVQISDSHLKNISIRSVEGEIYCAKSGRKFAGQIREKFIISDWRFV 252
Query: 255 ATGSYRFTWSSSHVDRNLLLLLTGQNVEPFDTEFRELYAISEEV 298
+GSY FTW HV RN+L TGQ VE FD EFR LYA S+ V
Sbjct: 253 LSGSYSFTWLCGHVHRNILSKFTGQAVELFDEEFRHLYASSKPV 296
>gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens]
Length = 434
Score = 161 bits (408), Expect = 1e-39
Identities = 108/284 (38%), Positives = 157/284 (55%), Gaps = 12/284 (4%)
Query: 18 VTEAQAAFYYCERRRAALEALLGGGEQAYRERLKEEQLRDFLSSPERQALRAAWSPYEDA 77
V A+A F E R A +ALL GG +AY L +E DFLSS E Q ++A E
Sbjct: 22 VRPARADFSDNESARLATDALLDGGSEAYWRVLSQEGEVDFLSSVEAQYIQA--QAREPP 79
Query: 78 VPAANARGKSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLDLGWT--DTGFYRGVSRV 135
P + G ++A K + +SG Y+P S+ P L W + + + S
Sbjct: 80 CPP-DTLGGAEAGPKGLDSSSLQSG---TYFPVASEGSEPALLHSWASAEKPYLKEKSSA 135
Query: 136 TLFTHPPKDEKAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQDIVDAACKRRVPVYII 195
T++ K +++ +VR+ I + +V+ ++MD+FTD +IF DI++AA KR V V ++
Sbjct: 136 TVYFQTVKHN---NIRDLVRRCITRTSQVLVILMDVFTDVEIFCDILEAANKRGVFVCVL 192
Query: 196 LDEAGVKYFLEMCQDLQLTDFRIRNIRVRSVTGVGFYMPMGR-IKGTLSSRFLMVDGDKV 254
LD+ GVK F EMC +Q++D ++NI +RSV G + GR G + +F++ D V
Sbjct: 193 LDQGGVKLFQEMCDKVQISDSHLKNISIRSVEGEIYCAKSGRKFAGQIREKFIISDWRFV 252
Query: 255 ATGSYRFTWSSSHVDRNLLLLLTGQNVEPFDTEFRELYAISEEV 298
+GSY FTW HV RN+L TGQ VE FD EFR LYA S+ V
Sbjct: 253 LSGSYSFTWLCGHVHRNILSKFTGQAVELFDEEFRHLYASSKPV 296
>gi|30425394 hypothetical protein LOC128876 [Homo sapiens]
Length = 747
Score = 154 bits (388), Expect = 2e-37
Identities = 99/275 (36%), Positives = 150/275 (54%), Gaps = 9/275 (3%)
Query: 27 YCERRRAALEALLGGGEQAYRERLKEEQLRDFLSSPERQALRAAWSPYEDAVPAANARGK 86
+ E R A +ALL GE AY + EE+ FLS+ + + S + A+G+
Sbjct: 41 HSEAARLAADALLERGEAAYLRVISEERELPFLSALDVDYMT---SHVRGGPELSEAQGQ 97
Query: 87 SKAKAKAPAPAPAESG-ESLAYWPDRSDTEVPPLDLGWTDTGFYRGVSRVTLFTHPPKDE 145
+A P S S Y+P SD + P LDLGW + G S H +D
Sbjct: 98 ---EASGPDRLSLLSEVTSGTYFPMASDIDPPDLDLGWPEVPQATGFSPTQAVVHFQRD- 153
Query: 146 KAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQDIVDAACKRRVPVYIILDEAGVKYFL 205
KA ++K ++R + QA V+AVVMD+FTD ++ D+++A+ +R VPVY++L + +++FL
Sbjct: 154 KAKNIKDLLRFLFSQAHTVVAVVMDIFTDMELLCDLMEASSRRGVPVYLLLAQEHLRHFL 213
Query: 206 EMCQDLQLTDFRIRNIRVRSVTGVGFYMPMG-RIKGTLSSRFLMVDGDKVATGSYRFTWS 264
EMC + L + N+RVRS G + G R G +F+++D ++V GSY FTW
Sbjct: 214 EMCYKMDLNGEHLPNMRVRSTCGDTYCSKAGRRFTGQALEKFVLIDCEQVVAGSYSFTWL 273
Query: 265 SSHVDRNLLLLLTGQNVEPFDTEFRELYAISEEVD 299
S +++L L G+ VE FD EFR LYA S+ V+
Sbjct: 274 CSQAHTSMVLQLRGRIVEDFDREFRCLYAESQPVE 308
>gi|167555125 low density lipoprotein receptor-related protein 3
[Homo sapiens]
Length = 770
Score = 38.1 bits (87), Expect = 0.019
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 22/109 (20%)
Query: 384 VLPPVEPIPLGELSQKDGRMVSHMHRDLKPKSREAPSRNGMGEAARGEAAPARRFSSRLF 443
++PPVE P+ SQ ++ ++ ++ + R SR G P+RR RL+
Sbjct: 561 LIPPVEDFPVYSASQAS--VLQNLRTAMRRQMRRHASRRG----------PSRRRLGRLW 608
Query: 444 SRRAKRPAAPNGMASSVSTETSEVEFLTGKRPNENSSADISGKTSPSSA 492
+R RP AP G ++ LT RP++ D + +P +A
Sbjct: 609 NRLFHRPRAPRG----------QIPLLTAARPSQTVLGDGFLQPAPGAA 647
>gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]
Length = 847
Score = 36.6 bits (83), Expect = 0.055
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 38 LLGGGEQAYRERLKEEQLRDFLSSPERQALRAAWSPYEDAVPAANARG-KSKAKAKAPAP 96
L G E+ L E D LS P+ A AA SP++D P RG + + AP P
Sbjct: 161 LRGAAEETRDSDLSELSDTDPLSEPDPPARDAA-SPHQDGAPGPGPRGGRGQEWRPAPGP 219
Query: 97 APAESGESLA 106
AP + E+ A
Sbjct: 220 APGQGAEASA 229
>gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens]
Length = 847
Score = 36.6 bits (83), Expect = 0.055
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 38 LLGGGEQAYRERLKEEQLRDFLSSPERQALRAAWSPYEDAVPAANARG-KSKAKAKAPAP 96
L G E+ L E D LS P+ A AA SP++D P RG + + AP P
Sbjct: 161 LRGAAEETRDSDLSELSDTDPLSEPDPPARDAA-SPHQDGAPGPGPRGGRGQEWRPAPGP 219
Query: 97 APAESGESLA 106
AP + E+ A
Sbjct: 220 APGQGAEASA 229
>gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]
Length = 794
Score = 35.4 bits (80), Expect = 0.12
Identities = 21/89 (23%), Positives = 39/89 (43%)
Query: 127 GFYRGVSRVTLFTHPPKDEKAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQDIVDAAC 186
GF V T F H + H Q + + +K + + D+ + +A+
Sbjct: 640 GFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASP 699
Query: 187 KRRVPVYIILDEAGVKYFLEMCQDLQLTD 215
+VPV++ L + GV YFL+ ++ + D
Sbjct: 700 DAQVPVFLALCKLGVVYFLQYIRETNIRD 728
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 35.4 bits (80), Expect = 0.12
Identities = 48/183 (26%), Positives = 62/183 (33%), Gaps = 36/183 (19%)
Query: 313 HYSSTVARKLINPKYA---------LVSGCRHP-PGEMMRWAARQQREAGGNPEGQEEGA 362
HYS + + ++PK+ SG R P P W + Q+ GG+ GQ GA
Sbjct: 268 HYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRN--GGS--GQRSGA 323
Query: 363 SGGESAWRLESFLKDLVTVEQVLPPVEPIPLGELSQKDGRMVSHMHRDLKPKSREAPSRN 422
GG K P P P P R APS
Sbjct: 324 HGGRPGSAHSPPDK----------PSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQ 373
Query: 423 GMGEAARGEAAPARR------------FSSRLFSRRAKRPAAPNGMASSVSTETSEVEFL 470
G G A G A RR + R RR RPA P G + S+S S +
Sbjct: 374 GRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSG 433
Query: 471 TGK 473
+G+
Sbjct: 434 SGR 436
>gi|33598929 scavenger receptor class F, member 1 isoform 1
precursor [Homo sapiens]
Length = 830
Score = 34.3 bits (77), Expect = 0.27
Identities = 49/186 (26%), Positives = 71/186 (38%), Gaps = 32/186 (17%)
Query: 334 RHPPGEM---MRWAARQQREAGGNPEGQE-EGASGGESAWRLESFLK-----DLVTVEQ- 383
R GE+ +R R R A PEG+E E ++G E A ESF D T +
Sbjct: 603 RRSSGELSSPLRKPKRLSRGAQSGPEGREAEESTGPEEAEAPESFPAAASPGDSATGHRR 662
Query: 384 -------VLPPVEPIPLGELSQKDGRMVSHMHRDLKPKSREAPSRN---GMGEAARGEA- 432
V VE I G + + G + + KP+ E P R+ G +G+A
Sbjct: 663 PPLGGRTVAEHVEAIE-GSVQESSGPVTTIYMLAGKPRGSEGPVRSVFRHFGSFQKGQAE 721
Query: 433 APARRFSSRLFSRRAKRPAAPNGMASSVSTETSEVEFLTGKRPNENSSADISGKTSPSSA 492
A +R + + R G+AS G+ PN A + G T P +
Sbjct: 722 AKVKRAIPKPPRQALNRKKGSPGLASGS----------VGQSPNSAPKAGLPGATGPMAV 771
Query: 493 KPSNCV 498
+P V
Sbjct: 772 RPEEAV 777
>gi|145309306 scavenger receptor class F, member 1 isoform 5
precursor [Homo sapiens]
Length = 744
Score = 34.3 bits (77), Expect = 0.27
Identities = 49/186 (26%), Positives = 71/186 (38%), Gaps = 32/186 (17%)
Query: 334 RHPPGEM---MRWAARQQREAGGNPEGQE-EGASGGESAWRLESFLK-----DLVTVEQ- 383
R GE+ +R R R A PEG+E E ++G E A ESF D T +
Sbjct: 517 RRSSGELSSPLRKPKRLSRGAQSGPEGREAEESTGPEEAEAPESFPAAASPGDSATGHRR 576
Query: 384 -------VLPPVEPIPLGELSQKDGRMVSHMHRDLKPKSREAPSRN---GMGEAARGEA- 432
V VE I G + + G + + KP+ E P R+ G +G+A
Sbjct: 577 PPLGGRTVAEHVEAIE-GSVQESSGPVTTIYMLAGKPRGSEGPVRSVFRHFGSFQKGQAE 635
Query: 433 APARRFSSRLFSRRAKRPAAPNGMASSVSTETSEVEFLTGKRPNENSSADISGKTSPSSA 492
A +R + + R G+AS G+ PN A + G T P +
Sbjct: 636 AKVKRAIPKPPRQALNRKKGSPGLASGS----------VGQSPNSAPKAGLPGATGPMAV 685
Query: 493 KPSNCV 498
+P V
Sbjct: 686 RPEEAV 691
>gi|4503993 growth hormone receptor precursor [Homo sapiens]
Length = 638
Score = 32.7 bits (73), Expect = 0.79
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 40 GGGEQAYRERLKEEQLRDFLSSPERQALRAAWSPYEDAVPAANARGKSKAKAKAPAPAPA 99
G E A +RLK E D L ++ SPY DA PA +A+ P P P
Sbjct: 407 GTSEVAQPQRLKGEA--DLLCLDQKNQNN---SPYHDACPATQQPSVIQAEKNKPQPLPT 461
Query: 100 ESGES 104
E ES
Sbjct: 462 EGAES 466
>gi|112382244 proto-oncogene tyrosine-protein kinase FGR [Homo
sapiens]
Length = 529
Score = 32.7 bits (73), Expect = 0.79
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 75 EDAVPAANARGKSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLDLGWTDTGFYRGVS- 133
EDA + R A P P A S A+ P+ S+ ++ G+ D+G RGVS
Sbjct: 17 EDAGLEGDFRSYGAADHYGPDPTKARPASSFAHIPNYSNFSSQAINPGFLDSGTIRGVSG 76
Query: 134 -RVTLF 138
VTLF
Sbjct: 77 IGVTLF 82
>gi|112382241 proto-oncogene tyrosine-protein kinase FGR [Homo
sapiens]
Length = 529
Score = 32.7 bits (73), Expect = 0.79
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 75 EDAVPAANARGKSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLDLGWTDTGFYRGVS- 133
EDA + R A P P A S A+ P+ S+ ++ G+ D+G RGVS
Sbjct: 17 EDAGLEGDFRSYGAADHYGPDPTKARPASSFAHIPNYSNFSSQAINPGFLDSGTIRGVSG 76
Query: 134 -RVTLF 138
VTLF
Sbjct: 77 IGVTLF 82
>gi|4885235 proto-oncogene tyrosine-protein kinase FGR [Homo
sapiens]
Length = 529
Score = 32.7 bits (73), Expect = 0.79
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 75 EDAVPAANARGKSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLDLGWTDTGFYRGVS- 133
EDA + R A P P A S A+ P+ S+ ++ G+ D+G RGVS
Sbjct: 17 EDAGLEGDFRSYGAADHYGPDPTKARPASSFAHIPNYSNFSSQAINPGFLDSGTIRGVSG 76
Query: 134 -RVTLF 138
VTLF
Sbjct: 77 IGVTLF 82
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 32.7 bits (73), Expect = 0.79
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 413 PKSREAPSRNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGMASSVSTETSEVEFLTG 472
P AP + + E E PA+R RR+ ++ + +SS S+ +S +
Sbjct: 2580 PSPTPAP-KEAVREGRPPEPTPAKR------KRRSSSSSSSSSSSSSSSSSSSSSSSSSS 2632
Query: 473 KRPNENSSADISGKTSPSSAKP 494
+ +SS+ S +SPS AKP
Sbjct: 2633 SSSSSSSSSSSSSSSSPSPAKP 2654
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 32.7 bits (73), Expect = 0.79
Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 14/164 (8%)
Query: 337 PGEMMRWAARQQREAGGNPEGQEEGASGGESAWRLESFLKDLVTVEQVLPPVEPIPLGEL 396
PGE+ W A ++ E G +G EE A G A E + D E P E E
Sbjct: 323 PGELA-WDAAEEAEVPG-VKGSEEAAPGDARADAGEDRVGDGPQQE----PGEDEERRER 376
Query: 397 SQKDGRMVSHMHRDLKPKSREAPSRNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGM 456
S + R + E+P + GEA+RG A P + S+ L + PA +G
Sbjct: 377 SPEGPR-----EEEAAGGEEESPDSSPHGEASRGAAEPEAQLSNHL---AEEGPAEGSGE 428
Query: 457 ASSVSTETSEVEFLTGKRPNENSSADISGKTSPSSAKPSNCVIS 500
A+ V+ + E + + + K NC S
Sbjct: 429 AARVNGRREDGEASEPRALGQEHDITLFVKAGYDGESIGNCPFS 472
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 32.3 bits (72), Expect = 1.0
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Query: 11 EAHVNEKVTEAQAAFYYCERRRAALEALL-------GGGEQAYRERLKEEQLRDFLSSPE 63
EA + K E + E +L+A L G + A + ++ ++ D ++S
Sbjct: 1894 EAEASRKKHELEMDLESLEAANQSLQADLKLAFKRIGDLQAAIEDEMESDENEDLINSEG 1953
Query: 64 RQALRAAWSPYEDAVPAANARGKSKAKAKAPAPAPAESGESLAYW----PDRSDTEVPPL 119
+ + D V + ++ K +KA A +S +YW PDRSD E PL
Sbjct: 1954 DSDVDSELEDRVDGVKSWLSKNKGPSKA-ASDDGSLKSSSPTSYWKSLAPDRSDDEHDPL 2012
Query: 120 D 120
D
Sbjct: 2013 D 2013
>gi|156104869 chloride channel 2 [Homo sapiens]
Length = 898
Score = 31.6 bits (70), Expect = 1.8
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 408 HRDLKPKSREAPS-RNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGMASSVSTETSE 466
H+ LKP + PS +GE+ G A A LF +P A+S E+ E
Sbjct: 692 HKPLKPALKRGPSVTRNLGESPTGSAESAGIALRSLFC------GSPPPEAASEKLESCE 745
Query: 467 VEFLTGKRPNENSSADISGKTSP 489
L R + S AD+ G+ SP
Sbjct: 746 KRKLKRVRISLASDADLEGEMSP 768
>gi|94681038 phospholipase D4 [Homo sapiens]
Length = 506
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 233 MPMGRI-KGTLSSRFLMVDGDKVATGSYRFTWSS 265
+PMGR+ +G L S+F +VDG + GS W S
Sbjct: 203 VPMGRLTRGVLHSKFWVVDGRHIYMGSANMDWRS 236
>gi|216547801 SH2 domain containing 3C isoform e [Homo sapiens]
Length = 700
Score = 31.6 bits (70), Expect = 1.8
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 404 VSHMHRDLKPKSREAPSRNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGMASSVSTE 463
+ +H + P S E+PS R AAPA P+A AS V+
Sbjct: 240 IPDLHSPMSPIS-ESPSSPAYSTVTRVHAAPAA-------------PSATALPASPVARR 285
Query: 464 TSEVEFLTGKRPNENSSADISGKTSPS 490
+SE + G P + +D TSPS
Sbjct: 286 SSEPQLCPGSAPKTHGESDKGPHTSPS 312
>gi|216547790 SH2 domain containing 3C isoform d [Homo sapiens]
Length = 702
Score = 31.6 bits (70), Expect = 1.8
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 404 VSHMHRDLKPKSREAPSRNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGMASSVSTE 463
+ +H + P S E+PS R AAPA P+A AS V+
Sbjct: 242 IPDLHSPMSPIS-ESPSSPAYSTVTRVHAAPAA-------------PSATALPASPVARR 287
Query: 464 TSEVEFLTGKRPNENSSADISGKTSPS 490
+SE + G P + +D TSPS
Sbjct: 288 SSEPQLCPGSAPKTHGESDKGPHTSPS 314
>gi|216547779 SH2 domain containing 3C isoform c [Homo sapiens]
Length = 506
Score = 31.6 bits (70), Expect = 1.8
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 404 VSHMHRDLKPKSREAPSRNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGMASSVSTE 463
+ +H + P S E+PS R AAPA P+A AS V+
Sbjct: 46 IPDLHSPMSPIS-ESPSSPAYSTVTRVHAAPAA-------------PSATALPASPVARR 91
Query: 464 TSEVEFLTGKRPNENSSADISGKTSPS 490
+SE + G P + +D TSPS
Sbjct: 92 SSEPQLCPGSAPKTHGESDKGPHTSPS 118
>gi|216547769 SH2 domain containing 3C isoform c [Homo sapiens]
Length = 506
Score = 31.6 bits (70), Expect = 1.8
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 404 VSHMHRDLKPKSREAPSRNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGMASSVSTE 463
+ +H + P S E+PS R AAPA P+A AS V+
Sbjct: 46 IPDLHSPMSPIS-ESPSSPAYSTVTRVHAAPAA-------------PSATALPASPVARR 91
Query: 464 TSEVEFLTGKRPNENSSADISGKTSPS 490
+SE + G P + +D TSPS
Sbjct: 92 SSEPQLCPGSAPKTHGESDKGPHTSPS 118
>gi|216547763 SH2 domain containing 3C isoform b [Homo sapiens]
Length = 703
Score = 31.6 bits (70), Expect = 1.8
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 404 VSHMHRDLKPKSREAPSRNGMGEAARGEAAPARRFSSRLFSRRAKRPAAPNGMASSVSTE 463
+ +H + P S E+PS R AAPA P+A AS V+
Sbjct: 243 IPDLHSPMSPIS-ESPSSPAYSTVTRVHAAPAA-------------PSATALPASPVARR 288
Query: 464 TSEVEFLTGKRPNENSSADISGKTSPS 490
+SE + G P + +D TSPS
Sbjct: 289 SSEPQLCPGSAPKTHGESDKGPHTSPS 315
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,676,144
Number of Sequences: 37866
Number of extensions: 948331
Number of successful extensions: 4037
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 3937
Number of HSP's gapped (non-prelim): 118
length of query: 500
length of database: 18,247,518
effective HSP length: 106
effective length of query: 394
effective length of database: 14,233,722
effective search space: 5608086468
effective search space used: 5608086468
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.