Search of human proteins with 156139133

Search of human proteins with 156139133

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|156139133 hypothetical protein LOC80017 isoform a [Homo
sapiens]
         (616 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|156139133 hypothetical protein LOC80017 isoform a [Homo sapiens]  1251   0.0  
gi|156139131 hypothetical protein LOC80017 isoform a [Homo sapiens]  1251   0.0  
gi|156139129 hypothetical protein LOC80017 isoform a [Homo sapiens]  1251   0.0  
gi|156139135 hypothetical protein LOC80017 isoform b [Homo sapiens]  1244   0.0  
gi|156139137 hypothetical protein LOC80017 isoform c [Homo sapiens]  1115   0.0  
gi|7661532 nin one binding protein [Homo sapiens]                      33   0.77 
gi|24308527 stereocilin [Homo sapiens]                                 31   2.9  
gi|167736355 mucin 4 isoform a [Homo sapiens]                          30   6.6  
gi|148792970 TAF4b RNA polymerase II, TATA box binding protein (...    30   8.6  

>gi|156139133 hypothetical protein LOC80017 isoform a [Homo sapiens]
          Length = 616

 Score = 1251 bits (3236), Expect = 0.0
 Identities = 616/616 (100%), Positives = 616/616 (100%)

Query: 1   MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT 60
           MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
Sbjct: 1   MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT 60

Query: 61  GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF 120
           GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
Sbjct: 61  GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF 120

Query: 121 FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA 180
           FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA
Sbjct: 121 FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA 180

Query: 181 CCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET 240
           CCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET
Sbjct: 181 CCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET 240

Query: 241 PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES 300
           PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES
Sbjct: 241 PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES 300

Query: 301 MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL 360
           MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL
Sbjct: 301 MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL 360

Query: 361 VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN 420
           VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN
Sbjct: 361 VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN 420

Query: 421 GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTGVGD 480
           GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTGVGD
Sbjct: 421 GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTGVGD 480

Query: 481 GGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYSCAVHS 540
           GGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYSCAVHS
Sbjct: 481 GGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYSCAVHS 540

Query: 541 QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT 600
           QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT
Sbjct: 541 QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT 600

Query: 601 HAEMIQKLVDVTTAQV 616
           HAEMIQKLVDVTTAQV
Sbjct: 601 HAEMIQKLVDVTTAQV 616


>gi|156139131 hypothetical protein LOC80017 isoform a [Homo sapiens]
          Length = 616

 Score = 1251 bits (3236), Expect = 0.0
 Identities = 616/616 (100%), Positives = 616/616 (100%)

Query: 1   MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT 60
           MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
Sbjct: 1   MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT 60

Query: 61  GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF 120
           GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
Sbjct: 61  GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF 120

Query: 121 FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA 180
           FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA
Sbjct: 121 FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA 180

Query: 181 CCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET 240
           CCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET
Sbjct: 181 CCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET 240

Query: 241 PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES 300
           PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES
Sbjct: 241 PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES 300

Query: 301 MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL 360
           MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL
Sbjct: 301 MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL 360

Query: 361 VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN 420
           VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN
Sbjct: 361 VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN 420

Query: 421 GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTGVGD 480
           GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTGVGD
Sbjct: 421 GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTGVGD 480

Query: 481 GGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYSCAVHS 540
           GGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYSCAVHS
Sbjct: 481 GGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYSCAVHS 540

Query: 541 QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT 600
           QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT
Sbjct: 541 QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT 600

Query: 601 HAEMIQKLVDVTTAQV 616
           HAEMIQKLVDVTTAQV
Sbjct: 601 HAEMIQKLVDVTTAQV 616


>gi|156139129 hypothetical protein LOC80017 isoform a [Homo sapiens]
          Length = 616

 Score = 1251 bits (3236), Expect = 0.0
 Identities = 616/616 (100%), Positives = 616/616 (100%)

Query: 1   MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT 60
           MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
Sbjct: 1   MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT 60

Query: 61  GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF 120
           GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
Sbjct: 61  GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF 120

Query: 121 FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA 180
           FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA
Sbjct: 121 FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA 180

Query: 181 CCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET 240
           CCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET
Sbjct: 181 CCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET 240

Query: 241 PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES 300
           PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES
Sbjct: 241 PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES 300

Query: 301 MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL 360
           MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL
Sbjct: 301 MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL 360

Query: 361 VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN 420
           VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN
Sbjct: 361 VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN 420

Query: 421 GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTGVGD 480
           GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTGVGD
Sbjct: 421 GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTGVGD 480

Query: 481 GGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYSCAVHS 540
           GGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYSCAVHS
Sbjct: 481 GGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYSCAVHS 540

Query: 541 QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT 600
           QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT
Sbjct: 541 QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT 600

Query: 601 HAEMIQKLVDVTTAQV 616
           HAEMIQKLVDVTTAQV
Sbjct: 601 HAEMIQKLVDVTTAQV 616


>gi|156139135 hypothetical protein LOC80017 isoform b [Homo sapiens]
          Length = 621

 Score = 1244 bits (3220), Expect = 0.0
 Identities = 616/621 (99%), Positives = 616/621 (99%), Gaps = 5/621 (0%)

Query: 1   MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT 60
           MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
Sbjct: 1   MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT 60

Query: 61  GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF 120
           GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
Sbjct: 61  GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF 120

Query: 121 FLGCSFSLEEALEKAGLPRRDPAGHSQ-----TTVPCVTHAGFCCPLVVTMRPIPKDKLE 175
           FLGCSFSLEEALEKAGLPRRDPAGHSQ     TTVPCVTHAGFCCPLVVTMRPIPKDKLE
Sbjct: 121 FLGCSFSLEEALEKAGLPRRDPAGHSQAGAYKTTVPCVTHAGFCCPLVVTMRPIPKDKLE 180

Query: 176 GLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV 235
           GLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV
Sbjct: 181 GLVRACCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAV 240

Query: 236 SSCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI 295
           SSCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI
Sbjct: 241 SSCETPLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKI 300

Query: 296 RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP 355
           RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP
Sbjct: 301 RELESMIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPP 360

Query: 356 GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA 415
           GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA
Sbjct: 361 GAVALVAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQA 420

Query: 416 FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS 475
           FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS
Sbjct: 421 FLCKNGDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISS 480

Query: 476 TGVGDGGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYS 535
           TGVGDGGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYS
Sbjct: 481 TGVGDGGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYS 540

Query: 536 CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL 595
           CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL
Sbjct: 541 CAVHSQYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGL 600

Query: 596 PFHNTHAEMIQKLVDVTTAQV 616
           PFHNTHAEMIQKLVDVTTAQV
Sbjct: 601 PFHNTHAEMIQKLVDVTTAQV 621


>gi|156139137 hypothetical protein LOC80017 isoform c [Homo sapiens]
          Length = 564

 Score = 1115 bits (2884), Expect = 0.0
 Identities = 564/616 (91%), Positives = 564/616 (91%), Gaps = 52/616 (8%)

Query: 1   MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT 60
           MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT
Sbjct: 1   MPFTLHLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNT 60

Query: 61  GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF 120
           GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF
Sbjct: 61  GPLPLLGQSEPEKWMLPPQGAISETRMGHPQFWKYEFGACTGSLASLEQYSEQLKDMVAF 120

Query: 121 FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA 180
           FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA
Sbjct: 121 FLGCSFSLEEALEKAGLPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRA 180

Query: 181 CCSLGGEQGQPVHMGDPELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET 240
           CCSLG            ELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET
Sbjct: 181 CCSLG------------ELLGIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET 228

Query: 241 PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES 300
           PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES
Sbjct: 229 PLAFASIPGCTVMTDLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELES 288

Query: 301 MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL 360
           MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL
Sbjct: 289 MIGIDPGNRGIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGAVAL 348

Query: 361 VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN 420
           VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN
Sbjct: 349 VAFLQALEKEVAIIVDQRAWNLHQKIVEDAVEQGVLKTQIPILTYQGGSVEAAQAFLCKN 408

Query: 421 GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTGVGD 480
           GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTG   
Sbjct: 409 GDPQTPRFDHLVAIERAGRAADGNYYNARKMNIKHLVDPIDDLFLAAKKIPGISSTG--- 465

Query: 481 GGNELGMGKVKEAVRRHIRHGDVIACDVEADFAVIAGVSNWGGYALACALYILYSCAVHS 540
                                                VSNWGGYALACALYILYSCAVHS
Sbjct: 466 -------------------------------------VSNWGGYALACALYILYSCAVHS 488

Query: 541 QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT 600
           QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT
Sbjct: 489 QYLRKAVGPSRAPGDQAWTQALPSVIKEEKMLGILVQHKVRSGVSGIVGMEVDGLPFHNT 548

Query: 601 HAEMIQKLVDVTTAQV 616
           HAEMIQKLVDVTTAQV
Sbjct: 549 HAEMIQKLVDVTTAQV 564


>gi|7661532 nin one binding protein [Homo sapiens]
          Length = 412

 Score = 33.1 bits (74), Expect = 0.77
 Identities = 14/43 (32%), Positives = 25/43 (58%)

Query: 310 GIGHLLCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETD 352
           G+ HL  + + +K S S+ H  + L  +GF   +  +PP+ET+
Sbjct: 99  GVSHLKQEPQKVKVSSSIQHPETPLHISGFHLPYKPKPPQETE 141


>gi|24308527 stereocilin [Homo sapiens]
          Length = 1775

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 59/250 (23%), Positives = 87/250 (34%), Gaps = 41/250 (16%)

Query: 6    HLRSRLPSAIRSLILQKKPNIRNTSSMAGELRPASLVVLPRSLAPAFERFCQVNTGPLPL 65
            H R  L S +   +   +  +R    +A  L P  L    +SL P  +    V  G L  
Sbjct: 906  HARHVLRSLVNQSVQDGEEQVRRLGPLACFLSPEEL----QSLVPLSDPTGPVERGLLEC 961

Query: 66   LGQSEPEKWMLPPQGAISETRMG-------------HPQFWKYEFGACTGSLASLEQYSE 112
                      L P+G ++   +G               + W   F      L  L++ SE
Sbjct: 962  AANGT-----LSPEGRVAYELLGVLRSSGGAVLSPRELRVWAPLFSQL--GLRFLQELSE 1014

Query: 113  -QLKDMVAFFLGCSFSLEEALEKAG--LPRRDPAGHSQTTVPCVTHAGFCCPLVVTMRPI 169
             QL+ M+    G S +  +A+   G  LPR D +        C  H         T++ I
Sbjct: 1015 PQLRAMLPVLQGTSVTPAQAVLLLGRLLPRHDLSLEEL----CSLHLLLPGLSPQTLQAI 1070

Query: 170  PKDKLEGLVRACCSLGGEQGQPVHMGDPELL-------GIKELSKPAYGDAMVCPPGEVP 222
            P+  L G   AC  L  E  +        LL       G+K +     G A+  P   +P
Sbjct: 1071 PRRVLVG---ACSCLAPELSRLSACQTAALLQTFRVKDGVKNMGTTGAGPAVCIPGQPIP 1127

Query: 223  VFWPSPLTSL 232
              WP  L  L
Sbjct: 1128 TTWPDCLLPL 1137


>gi|167736355 mucin 4 isoform a [Homo sapiens]
          Length = 5284

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 50/223 (22%), Positives = 74/223 (33%), Gaps = 26/223 (11%)

Query: 144  GHSQT---TVPCVTHAGFCCPLVVTMRPIPKDKLEGLVRACCSLGGEQGQPVHMGDPELL 200
            GH+ +   T+P    +G   PL VT      D          SL       V  G    L
Sbjct: 2700 GHATSLPVTIPSSASSGHTTPLPVT------DASSVSTGHATSLPVTDASSVSTGHATPL 2753

Query: 201  GIKELSKPAYGDAMVCPPGEVPVFWPSPLTSLGAVSSCET-PL-----AFASIPGCTVMT 254
             + + S  + G A            P PLTSL +VS+ +T PL     + AS    T + 
Sbjct: 2754 PVTDASSVSTGHAT-----------PLPLTSLSSVSTGDTTPLPVTDTSSASTGQATPLP 2802

Query: 255  DLKDAKAPPGCLTPERIPEVHHISQDPLHYSIASVSASQKIRELESMIGIDPGNRGIGHL 314
                +    G  TP  + +    S         + ++S        +   D  +   GH 
Sbjct: 2803 VTSLSSVSTGDTTPLPVTDTSSASTGHATSLPVTDTSSASTGHATPLPDTDTSSASTGHA 2862

Query: 315  LCKDELLKASLSLSHARSVLITTGFPTHFNHEPPEETDGPPGA 357
                    +S S+ HA S+ +T        H  P     P  A
Sbjct: 2863 TLLPVTDTSSASIGHATSLPVTDTSSISTGHATPLHVTSPSSA 2905


>gi|148792970 TAF4b RNA polymerase II, TATA box binding protein
           (TBP)-associated factor, 105kDa [Homo sapiens]
          Length = 862

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 7/71 (9%)

Query: 209 AYGDAMVCPPGEVPVFWPSPLTSLGA-----VSSCETPLAFASI--PGCTVMTDLKDAKA 261
           A G   + P G +PV   S   +LGA     VS C  P A   +  P  T++T +    A
Sbjct: 19  ASGTVTMAPAGALPVRVESTPVALGAVTKAPVSVCVEPTASQPLRSPVGTLVTKVAPVSA 78

Query: 262 PPGCLTPERIP 272
           PP   +  R+P
Sbjct: 79  PPKVSSGPRLP 89


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,750,499
Number of Sequences: 37866
Number of extensions: 1352933
Number of successful extensions: 2738
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2721
Number of HSP's gapped (non-prelim): 18
length of query: 616
length of database: 18,247,518
effective HSP length: 108
effective length of query: 508
effective length of database: 14,157,990
effective search space: 7192258920
effective search space used: 7192258920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.