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Search of human proteins with 15553097
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15553097 hypothetical protein MGC9084 [Homo sapiens]
(372 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15553097 hypothetical protein MGC9084 [Homo sapiens] 749 0.0
gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens] 45 8e-05
gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens] 44 2e-04
gi|188528686 hypothetical protein LOC151194 [Homo sapiens] 43 5e-04
gi|188528684 hypothetical protein LOC151194 [Homo sapiens] 43 5e-04
gi|74099699 HMT1 hnRNP methyltransferase-like 4 [Homo sapiens] 39 0.008
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 39 0.010
gi|126012513 hypothetical protein LOC124512 [Homo sapiens] 36 0.049
gi|223556010 protein arginine methyltransferase 3 isoform 3 [Hom... 36 0.064
gi|223556008 protein arginine methyltransferase 3 isoform 2 [Hom... 36 0.064
gi|44771198 protein arginine methyltransferase 3 isoform 1 [Homo... 36 0.064
gi|58293779 hypothetical protein LOC196541 [Homo sapiens] 35 0.083
gi|40288288 coactivator-associated arginine methyltransferase 1 ... 35 0.14
gi|134133220 hypothetical protein LOC85002 [Homo sapiens] 35 0.14
gi|154759421 HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo... 34 0.24
gi|151301219 HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo... 34 0.24
gi|150456457 HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo... 34 0.24
gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens] 34 0.24
gi|212549593 hypothetical protein LOC653333 [Homo sapiens] 33 0.32
gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens] 33 0.32
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 33 0.41
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 33 0.41
gi|18375650 protein tyrosine phosphatase, non-receptor type 13 i... 32 0.92
gi|18375648 protein tyrosine phosphatase, non-receptor type 13 i... 32 0.92
gi|18375646 protein tyrosine phosphatase, non-receptor type 13 i... 32 0.92
gi|5453992 protein tyrosine phosphatase, non-receptor type 13 is... 32 0.92
gi|4507963 zinc finger protein 37 homolog [Homo sapiens] 32 1.2
gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo sap... 31 1.6
gi|209413766 zinc finger and BTB domain containing 43 [Homo sapi... 31 1.6
gi|7662100 zinc finger and BTB domain containing 43 [Homo sapiens] 31 1.6
>gi|15553097 hypothetical protein MGC9084 [Homo sapiens]
Length = 372
Score = 749 bits (1934), Expect = 0.0
Identities = 372/372 (100%), Positives = 372/372 (100%)
Query: 1 MTFQFNFTIEDHLENELTPIRDGALTLDSSKELSVSESQKGEERDRKCSAEQFDLPQDHL 60
MTFQFNFTIEDHLENELTPIRDGALTLDSSKELSVSESQKGEERDRKCSAEQFDLPQDHL
Sbjct: 1 MTFQFNFTIEDHLENELTPIRDGALTLDSSKELSVSESQKGEERDRKCSAEQFDLPQDHL 60
Query: 61 WEHKSMENAAPSQDTDSPLSAASSSRNLEPHGKQPSLRAAKEHAMPKDLKKMLENKVIET 120
WEHKSMENAAPSQDTDSPLSAASSSRNLEPHGKQPSLRAAKEHAMPKDLKKMLENKVIET
Sbjct: 61 WEHKSMENAAPSQDTDSPLSAASSSRNLEPHGKQPSLRAAKEHAMPKDLKKMLENKVIET 120
Query: 121 LPGFQHVKLSVVKTILLKENFPGENIVSKSFSSHSDLITGVYEGGLKIWECTFDLLAYFT 180
LPGFQHVKLSVVKTILLKENFPGENIVSKSFSSHSDLITGVYEGGLKIWECTFDLLAYFT
Sbjct: 121 LPGFQHVKLSVVKTILLKENFPGENIVSKSFSSHSDLITGVYEGGLKIWECTFDLLAYFT 180
Query: 181 KAKVKFAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMVIDEVTLPNVVANSTLEDE 240
KAKVKFAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMVIDEVTLPNVVANSTLEDE
Sbjct: 181 KAKVKFAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMVIDEVTLPNVVANSTLEDE 240
Query: 241 ENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKYDLILTSETIYNPD 300
ENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKYDLILTSETIYNPD
Sbjct: 241 ENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKYDLILTSETIYNPD 300
Query: 301 YYSNLHQTFLRLLSKNGRVLLASKAHYFGVGGGVHLFQKFVEERDVFKTRILKIIDEGLK 360
YYSNLHQTFLRLLSKNGRVLLASKAHYFGVGGGVHLFQKFVEERDVFKTRILKIIDEGLK
Sbjct: 301 YYSNLHQTFLRLLSKNGRVLLASKAHYFGVGGGVHLFQKFVEERDVFKTRILKIIDEGLK 360
Query: 361 RFIIEITFKFPG 372
RFIIEITFKFPG
Sbjct: 361 RFIIEITFKFPG 372
>gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens]
Length = 226
Score = 45.4 bits (106), Expect = 8e-05
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 33/159 (20%)
Query: 167 KIWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGI-TAFKGGSKEIHFQDYNSMVIDE 225
++W+ L YF V F GKKV++LG G+G++GI A +GG +
Sbjct: 55 RVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGG---------------D 99
Query: 226 VTLPNVVANSTLEDEENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFV 285
VT+ ++ LE + +V + +V + +V L W +
Sbjct: 100 VTITDLPL--ALEQIQGNV-QANVPAGGQAQVRAL--------SWG------IDHHVFPA 142
Query: 286 KYDLILTSETIYNPDYYSNLHQTFLRLLSKNGRVLLASK 324
YDL+L ++ +Y + L T L +G + LASK
Sbjct: 143 NYDLVLGADIVYLEPTFPLLLGTLQHLCRPHGTIYLASK 181
>gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens]
Length = 149
Score = 43.9 bits (102), Expect = 2e-04
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 167 KIWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGITAFKGGS 210
++W+ L YF V F GKKV++LG G+G++GI A G+
Sbjct: 55 RVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGA 98
>gi|188528686 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 42.7 bits (99), Expect = 5e-04
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 28/160 (17%)
Query: 168 IWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMVIDEVT 227
+W+ L Y V+ G+ ++LG G+GL+GI A G+ H + V E
Sbjct: 46 VWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALLGA---HVTITDRKVALEFL 102
Query: 228 LPNVVANSTLEDEENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKY 287
NV AN P ++ K V +L W + E +
Sbjct: 103 KSNVQANL----------PPHIQ--TKTVVKEL--------TWGQNLGSFSPGE-----F 137
Query: 288 DLILTSETIYNPDYYSNLHQTFLRLLSKNGRVLLASKAHY 327
DLIL ++ IY + +++L QT L S + +LLA + Y
Sbjct: 138 DLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRY 177
>gi|188528684 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 42.7 bits (99), Expect = 5e-04
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 28/160 (17%)
Query: 168 IWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMVIDEVT 227
+W+ L Y V+ G+ ++LG G+GL+GI A G+ H + V E
Sbjct: 46 VWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALLGA---HVTITDRKVALEFL 102
Query: 228 LPNVVANSTLEDEENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKY 287
NV AN P ++ K V +L W + E +
Sbjct: 103 KSNVQANL----------PPHIQ--TKTVVKEL--------TWGQNLGSFSPGE-----F 137
Query: 288 DLILTSETIYNPDYYSNLHQTFLRLLSKNGRVLLASKAHY 327
DLIL ++ IY + +++L QT L S + +LLA + Y
Sbjct: 138 DLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRY 177
>gi|74099699 HMT1 hnRNP methyltransferase-like 4 [Homo sapiens]
Length = 394
Score = 38.9 bits (89), Expect = 0.008
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 144 ENIVSKSFSSHSDLITGVYEGGLKIWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGI 203
E + S+ + S G++E LK T K F K VLD+G G+G+L +
Sbjct: 68 EEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGILSM 127
Query: 204 TAFKGGSKEI------HFQDYNSMVIDEVTLPNVVA--NSTLEDEENDVNEPDV 249
A K G+K++ DY+ +I L N++ +E+ E V + D+
Sbjct: 128 FAAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELPVEKVDI 181
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 38.5 bits (88), Expect = 0.010
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 28 DSSKELSVSESQKGEERDRKCSAEQFDLPQDHLWEHKSMENAAPSQDTDS-PLSAASSSR 86
DS EL ESQK E++D+K S KS++N S D DS P + +
Sbjct: 408 DSESELESKESQKDEKKDKKDSKTD---------NKKSVKNDEESTDADSEPKGDSKKGK 458
Query: 87 NLEPHGKQPSLRAAKEHAMPKDLKKMLENKVIET 120
E GK+ S + K+ KD KK E+ +E+
Sbjct: 459 KDEKKGKKDSKKDDKK----KDAKKNAESTEMES 488
>gi|126012513 hypothetical protein LOC124512 [Homo sapiens]
Length = 190
Score = 36.2 bits (82), Expect = 0.049
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 30/157 (19%)
Query: 168 IWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMVIDEVT 227
+W C L Y + GK +L++G G L GI A K G++ I + D
Sbjct: 3 VWPCAVVLAQYLWFHRRSLPGKAILEIGAGVSLPGILAAKCGAEVI--------LSDSSE 54
Query: 228 LPNVVANSTLEDEENDVNEPDVKRCRKP-KVTQLYKCRFFSGEWSEFCKLVLSSEKLFVK 286
LP+ ++ CR+ ++ L + W +L+
Sbjct: 55 LPHC-----------------LEVCRQSCQMNNLPHLQVVGLTWGHISWDLLA----LPP 93
Query: 287 YDLILTSETIYNPDYYSNLHQTFLRLLSKNGRVLLAS 323
D+IL S+ + P+ + ++ T L+ KN +V L S
Sbjct: 94 QDIILASDVFFEPEDFEDILATIYFLMHKNPKVQLWS 130
>gi|223556010 protein arginine methyltransferase 3 isoform 3 [Homo
sapiens]
Length = 454
Score = 35.8 bits (81), Expect = 0.064
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 186 FAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMVIDEVTLPNVVANSTLED 239
F K VLD+GCG+G+L + A K G+K++ D + ++ + +++ + LED
Sbjct: 177 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAM---DIIRLNKLED 227
>gi|223556008 protein arginine methyltransferase 3 isoform 2 [Homo
sapiens]
Length = 469
Score = 35.8 bits (81), Expect = 0.064
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 186 FAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMVIDEVTLPNVVANSTLED 239
F K VLD+GCG+G+L + A K G+K++ D + ++ + +++ + LED
Sbjct: 192 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAM---DIIRLNKLED 242
>gi|44771198 protein arginine methyltransferase 3 isoform 1 [Homo
sapiens]
Length = 531
Score = 35.8 bits (81), Expect = 0.064
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 186 FAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMVIDEVTLPNVVANSTLED 239
F K VLD+GCG+G+L + A K G+K++ D + ++ + +++ + LED
Sbjct: 254 FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAM---DIIRLNKLED 304
>gi|58293779 hypothetical protein LOC196541 [Homo sapiens]
Length = 264
Score = 35.4 bits (80), Expect = 0.083
Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 33/190 (17%)
Query: 165 GLKIWECTFDLLAYFTK--AKVKFAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSMV 222
G +W L Y + ++ F K+L++G G GL+ I A G++
Sbjct: 88 GAVVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSIVASILGAQ----------- 136
Query: 223 IDEVTLPNVVANSTLEDEENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEK 282
+ LP+V+ N +N + P+V +L W E L + K
Sbjct: 137 VTATDLPDVLGNLQYNLLKNTLQ----CTAHLPEVKELV--------WGE--DLDKNFPK 182
Query: 283 LFVKYDLILTSETIYNPDYYSNLHQTFLRLLSKNGRVLLASKAHYFGVGGGVHLFQKFVE 342
YD +L S+ +Y+ Y+ + T + LS+ G VLL A+ F KF
Sbjct: 183 SAFYYDYVLASDVVYH-HYFLDKLLTTMVYLSQPGTVLL--WANKFRFSTDYEFLDKF-- 237
Query: 343 ERDVFKTRIL 352
+ VF T +L
Sbjct: 238 -KQVFDTTLL 246
>gi|40288288 coactivator-associated arginine methyltransferase 1
[Homo sapiens]
Length = 608
Score = 34.7 bits (78), Expect = 0.14
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 186 FAGKKVLDLGCGSGLLGITAFKGGSKEIHFQDYNSM 221
F K VLD+GCGSG+L A + G+++I+ + ++M
Sbjct: 183 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTM 218
>gi|134133220 hypothetical protein LOC85002 [Homo sapiens]
Length = 296
Score = 34.7 bits (78), Expect = 0.14
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 136 LLKENFPGENIVSKSFSSHSDLITGVYEGGLKIWECTFDLLAYFTKAKVKFAGKKVLDLG 195
L+K++ G +SKS + S TG L W+ L + + F + VL+LG
Sbjct: 77 LIKKSSGGSVTLSKSTAIISHGTTG-----LVTWDAALYLAEWAIENPAAFINRTVLELG 131
Query: 196 CGSGLLGITAFKGGSKEIH-FQDYNSMVIDEVTLPNVVAN 234
G+GL G+ K + F D +S V++++ NV+ N
Sbjct: 132 SGAGLTGLAICKMCRPRAYIFSDPHSRVLEQLR-GNVLLN 170
>gi|154759421 HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo
sapiens]
Length = 371
Score = 33.9 bits (76), Expect = 0.24
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 144 ENIVSKSFSSHSDLITGVYEGGLKIWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGI 203
E++ SK + S G++E LK T + F K VLD+G G+G+L +
Sbjct: 45 EDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCM 104
Query: 204 TAFKGGSKEI------HFQDYNSMVIDEVTLPNVVA--NSTLEDEENDVNEPDV 249
A K G++++ DY ++ L +VV +E+ E V + D+
Sbjct: 105 FAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDI 158
>gi|151301219 HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo
sapiens]
Length = 353
Score = 33.9 bits (76), Expect = 0.24
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 144 ENIVSKSFSSHSDLITGVYEGGLKIWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGI 203
E++ SK + S G++E LK T + F K VLD+G G+G+L +
Sbjct: 27 EDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCM 86
Query: 204 TAFKGGSKEI------HFQDYNSMVIDEVTLPNVVA--NSTLEDEENDVNEPDV 249
A K G++++ DY ++ L +VV +E+ E V + D+
Sbjct: 87 FAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDI 140
>gi|150456457 HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo
sapiens]
Length = 347
Score = 33.9 bits (76), Expect = 0.24
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 144 ENIVSKSFSSHSDLITGVYEGGLKIWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGI 203
E++ SK + S G++E LK T + F K VLD+G G+G+L +
Sbjct: 21 EDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCM 80
Query: 204 TAFKGGSKEI------HFQDYNSMVIDEVTLPNVVA--NSTLEDEENDVNEPDV 249
A K G++++ DY ++ L +VV +E+ E V + D+
Sbjct: 81 FAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDI 134
>gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens]
Length = 330
Score = 33.9 bits (76), Expect = 0.24
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 130 SVVKTILLKENFPGEN--IVSKSFS---SHSDLITGVYEGGLKIWECTFDLLAYFTKAKV 184
++ +T++ KE+ G ++ S S S I GL W+ L + +
Sbjct: 95 ALAETLMAKESTQGHRSYLLPSGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPA 154
Query: 185 KFAGKKVLDLGCGSGLLGITAFKGGSKEIH-FQDYNSMVIDEVTLPNVVAN 234
F + VL+LG G+GL G+ K + F D +S V++++ NV+ N
Sbjct: 155 VFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLR-GNVLLN 204
>gi|212549593 hypothetical protein LOC653333 [Homo sapiens]
Length = 330
Score = 33.5 bits (75), Expect = 0.32
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Query: 131 VVKTILLKENFPGEN--IVSKSFS---SHSDLITGVYEGGLKIWECTFDLLAYFTKAKVK 185
+ +T++ KE+ G ++S S S S I GL W+ L + +
Sbjct: 96 LAETLMAKESTQGHRSYLLSSGGSVTLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAA 155
Query: 186 FAGKKVLDLGCGSGLLGITAFKGGSKEIH-FQDYNSMVIDEVTLPNVVAN 234
F + VL+LG G+GL G+ K + F D +S +++++ NV+ N
Sbjct: 156 FINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRILEQLR-GNVLLN 204
>gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens]
Length = 296
Score = 33.5 bits (75), Expect = 0.32
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 153 SHSDLITGVYEGGLKIWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGITAFKGGSKE 212
S S I GL W+ L + + F + VL+LG G+GL G+ K
Sbjct: 89 SESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPR 148
Query: 213 IH-FQDYNSMVIDEVTLPNVVAN 234
+ F D +S V++++ NV+ N
Sbjct: 149 AYIFSDCHSRVLEQLR-GNVLLN 170
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 33.1 bits (74), Expect = 0.41
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 29 SSKELSVSESQKGEERDRKCSAEQFDLPQDHLWEHK------SMENAAPSQDTDSPLSAA 82
+SK + S+ R R ++ + +DH+ E + SM ++ +D L
Sbjct: 511 TSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKN 570
Query: 83 SSSRNLEPHGKQPSLRAAKEHAMPKDLKKMLENKV 117
S+S + H K+P +KE KD + ENK+
Sbjct: 571 STSLKEKEHNKEPDSSVSKE-VDDKDAPRTEENKI 604
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 33.1 bits (74), Expect = 0.41
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 29 SSKELSVSESQKGEERDRKCSAEQFDLPQDHLWEHK------SMENAAPSQDTDSPLSAA 82
+SK + S+ R R ++ + +DH+ E + SM ++ +D L
Sbjct: 395 TSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKN 454
Query: 83 SSSRNLEPHGKQPSLRAAKEHAMPKDLKKMLENKV 117
S+S + H K+P +KE KD + ENK+
Sbjct: 455 STSLKEKEHNKEPDSSVSKE-VDDKDAPRTEENKI 488
>gi|18375650 protein tyrosine phosphatase, non-receptor type 13
isoform 4 [Homo sapiens]
Length = 2490
Score = 32.0 bits (71), Expect = 0.92
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 18/87 (20%)
Query: 229 PNVVANSTLEDEENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKYD 288
P+ V ST DE N++++ K+C+ P Y SGE D
Sbjct: 1626 PSCVEQSTSSDE-NEMSDKSKKQCKSPSRRDSYSDSSGSGE-----------------DD 1667
Query: 289 LILTSETIYNPDYYSNLHQTFLRLLSK 315
L+ I N + S LHQT ++S+
Sbjct: 1668 LVTAPANISNSTWSSALHQTLSNMVSQ 1694
>gi|18375648 protein tyrosine phosphatase, non-receptor type 13
isoform 3 [Homo sapiens]
Length = 2294
Score = 32.0 bits (71), Expect = 0.92
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 18/87 (20%)
Query: 229 PNVVANSTLEDEENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKYD 288
P+ V ST DE N++++ K+C+ P Y SGE D
Sbjct: 1430 PSCVEQSTSSDE-NEMSDKSKKQCKSPSRRDSYSDSSGSGE-----------------DD 1471
Query: 289 LILTSETIYNPDYYSNLHQTFLRLLSK 315
L+ I N + S LHQT ++S+
Sbjct: 1472 LVTAPANISNSTWSSALHQTLSNMVSQ 1498
>gi|18375646 protein tyrosine phosphatase, non-receptor type 13
isoform 1 [Homo sapiens]
Length = 2485
Score = 32.0 bits (71), Expect = 0.92
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 18/87 (20%)
Query: 229 PNVVANSTLEDEENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKYD 288
P+ V ST DE N++++ K+C+ P Y SGE D
Sbjct: 1621 PSCVEQSTSSDE-NEMSDKSKKQCKSPSRRDSYSDSSGSGE-----------------DD 1662
Query: 289 LILTSETIYNPDYYSNLHQTFLRLLSK 315
L+ I N + S LHQT ++S+
Sbjct: 1663 LVTAPANISNSTWSSALHQTLSNMVSQ 1689
>gi|5453992 protein tyrosine phosphatase, non-receptor type 13 isoform
2 [Homo sapiens]
Length = 2466
Score = 32.0 bits (71), Expect = 0.92
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 18/87 (20%)
Query: 229 PNVVANSTLEDEENDVNEPDVKRCRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKYD 288
P+ V ST DE N++++ K+C+ P Y SGE D
Sbjct: 1602 PSCVEQSTSSDE-NEMSDKSKKQCKSPSRRDSYSDSSGSGE-----------------DD 1643
Query: 289 LILTSETIYNPDYYSNLHQTFLRLLSK 315
L+ I N + S LHQT ++S+
Sbjct: 1644 LVTAPANISNSTWSSALHQTLSNMVSQ 1670
>gi|4507963 zinc finger protein 37 homolog [Homo sapiens]
Length = 630
Score = 31.6 bits (70), Expect = 1.2
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
Query: 6 NFTIEDHLENELTPIRDGALTLDSSKELSVSESQKGEERDRKCSAEQFDLPQDHLWEHKS 65
N + DH N + D A S S+S+++KG+++ K + L H S
Sbjct: 187 NLDLPDHSRNCVKRKSDAAKEHKKSFNHSLSDTRKGKKQTGK--------KHEKLSSHSS 238
Query: 66 MENAAPSQDTDSPLSAASSS-------RNLEPHGKQPSLRAAKEHAMPKDLKKMLE 114
+ + L SSS + E H K PSL ++ +H P+ K E
Sbjct: 239 SDKCNKTGKKHDKLCCHSSSHIKQDKIQTGEKHEKSPSLSSSTKHEKPQACVKPYE 294
>gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo
sapiens]
Length = 329
Score = 31.2 bits (69), Expect = 1.6
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 130 SVVKTILLKENFPGENIVSKSFS-----SHSDLITGVYEGGLKIWECTFDLLAYFTKAKV 184
++ +T++ KE+ G + S S I G W+ L+ + +
Sbjct: 95 ALAETLMAKESTQGHQSYLLPWGGSVTXSESTAIISHGTTGRVTWDTALYLVEWAIENPA 154
Query: 185 KFAGKKVLDLGCGSGLLGITAFKGGSKEIH-FQDYNSMVIDEVTLPNVVAN 234
F + VL+LG G+GL G+ K + F D +S V++++ NV+ N
Sbjct: 155 AFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRVLEQLQ-GNVLLN 204
>gi|209413766 zinc finger and BTB domain containing 43 [Homo
sapiens]
Length = 467
Score = 31.2 bits (69), Expect = 1.6
Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 13/147 (8%)
Query: 23 GALTLDSSKELSVSESQKGEERDRKCS--AEQFDLPQDHLWEHKSMENAAPSQDTDSPLS 80
G ++EL E+++ +D S E LP + EH + SQD + S
Sbjct: 161 GHTDFPKAQELRDGENEEESTKDELSSQLTEHEYLPSNSSTEHDRLSTEMASQDGEEGAS 220
Query: 81 AASSSRNLEPHGKQPSLRAAKE--HAMPKDLKKMLENKVIETLPGFQHVKLSV------- 131
++ P +PS+ A K H P+ L++ E + V S+
Sbjct: 221 DSAEFHYTRPMYSKPSIMAHKRWIHVKPERLEQACEGMDVHATYDEHQVTESINTVQTEH 280
Query: 132 -VKTILLKENFP-GENIVSKSFSSHSD 156
V+ ++E+F GE V F +D
Sbjct: 281 TVQPSGVEEDFHIGEKKVEAEFDEQAD 307
>gi|7662100 zinc finger and BTB domain containing 43 [Homo sapiens]
Length = 467
Score = 31.2 bits (69), Expect = 1.6
Identities = 34/147 (23%), Positives = 57/147 (38%), Gaps = 13/147 (8%)
Query: 23 GALTLDSSKELSVSESQKGEERDRKCS--AEQFDLPQDHLWEHKSMENAAPSQDTDSPLS 80
G ++EL E+++ +D S E LP + EH + SQD + S
Sbjct: 161 GHTDFPKAQELRDGENEEESTKDELSSQLTEHEYLPSNSSTEHDRLSTEMASQDGEEGAS 220
Query: 81 AASSSRNLEPHGKQPSLRAAKE--HAMPKDLKKMLENKVIETLPGFQHVKLSV------- 131
++ P +PS+ A K H P+ L++ E + V S+
Sbjct: 221 DSAEFHYTRPMYSKPSIMAHKRWIHVKPERLEQACEGMDVHATYDEHQVTESINTVQTEH 280
Query: 132 -VKTILLKENFP-GENIVSKSFSSHSD 156
V+ ++E+F GE V F +D
Sbjct: 281 TVQPSGVEEDFHIGEKKVEAEFDEQAD 307
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,881,010
Number of Sequences: 37866
Number of extensions: 616583
Number of successful extensions: 2051
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2014
Number of HSP's gapped (non-prelim): 63
length of query: 372
length of database: 18,247,518
effective HSP length: 104
effective length of query: 268
effective length of database: 14,309,454
effective search space: 3834933672
effective search space used: 3834933672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.