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Search of human proteins with 153792186
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153792186 claudin 7 [Homo sapiens]
(211 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153792186 claudin 7 [Homo sapiens] 429 e-120
gi|10863887 claudin 1 [Homo sapiens] 276 1e-74
gi|183979975 claudin 19 isoform b [Homo sapiens] 249 1e-66
gi|183979973 claudin 19 isoform a [Homo sapiens] 245 2e-65
gi|4502877 claudin 4 [Homo sapiens] 209 1e-54
gi|4502875 claudin 3 [Homo sapiens] 208 2e-54
gi|11141861 claudin 9 [Homo sapiens] 205 2e-53
gi|153792768 claudin 6 [Homo sapiens] 198 2e-51
gi|195947374 claudin 5 [Homo sapiens] 194 4e-50
gi|195947372 claudin 5 [Homo sapiens] 194 4e-50
gi|225703142 claudin 14 [Homo sapiens] 184 4e-47
gi|21536294 claudin 14 [Homo sapiens] 184 4e-47
gi|225703138 claudin 14 [Homo sapiens] 184 4e-47
gi|6912314 claudin 14 [Homo sapiens] 184 4e-47
gi|225703140 claudin 14 [Homo sapiens] 184 4e-47
gi|40788011 claudin 8 [Homo sapiens] 184 6e-47
gi|6912316 claudin 17 [Homo sapiens] 174 5e-44
gi|9966781 claudin 2 [Homo sapiens] 167 6e-42
gi|47716519 claudin 20 [Homo sapiens] 162 3e-40
gi|5921465 claudin 10 isoform b [Homo sapiens] 158 4e-39
gi|7656981 claudin 15 [Homo sapiens] 154 7e-38
gi|33598916 claudin 10 isoform a [Homo sapiens] 145 2e-35
gi|50345279 claudin 18 isoform 2 [Homo sapiens] 141 4e-34
gi|7705961 claudin 18 isoform 1 [Homo sapiens] 140 6e-34
gi|169166402 PREDICTED: claudin-24-like [Homo sapiens] 129 2e-30
gi|231569235 claudin 10 isoform a_i1 [Homo sapiens] 129 2e-30
gi|169167239 PREDICTED: claudin-24-like [Homo sapiens] 127 7e-30
gi|169166931 PREDICTED: claudin-24-like [Homo sapiens] 127 7e-30
gi|162417973 claudin 22 [Homo sapiens] 127 9e-30
gi|157820127 claudin-like [Homo sapiens] 104 5e-23
>gi|153792186 claudin 7 [Homo sapiens]
Length = 211
Score = 429 bits (1102), Expect = e-120
Identities = 211/211 (100%), Positives = 211/211 (100%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG
Sbjct: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM
Sbjct: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA
Sbjct: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
Query: 181 LLSCSCPGNESKAGYRVPRSYPKSNSSKEYV 211
LLSCSCPGNESKAGYRVPRSYPKSNSSKEYV
Sbjct: 181 LLSCSCPGNESKAGYRVPRSYPKSNSSKEYV 211
>gi|10863887 claudin 1 [Homo sapiens]
Length = 211
Score = 276 bits (705), Expect = 1e-74
Identities = 129/213 (60%), Positives = 169/213 (79%), Gaps = 4/213 (1%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MAN+GLQLLGF +A LGW+G + TA+PQW++ SYAGDNI+TAQAMY+GLWM CV+QSTG
Sbjct: 1 MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ CK++DS+L LS+ LQATRALMVV ++LG +A+FVAT+GMKC +C DD+V+K R+A+
Sbjct: 61 QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV 120
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG IF++AGLA LVA +WYG++IV +FY+P+ P N +YEFG A+F GWA ++L +LGGA
Sbjct: 121 IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA 180
Query: 181 LLSCSCPGNESKAGYRVPRSYPK--SNSSKEYV 211
LL CSCP Y PR YPK +S K+YV
Sbjct: 181 LLCCSCP--RKTTSYPTPRPYPKPAPSSGKDYV 211
>gi|183979975 claudin 19 isoform b [Homo sapiens]
Length = 211
Score = 249 bits (636), Expect = 1e-66
Identities = 113/211 (53%), Positives = 153/211 (72%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MANSGLQLLG+ +AL GWVG++A TA+PQW+ SSYAGD IITA +Y+GLWM C +QSTG
Sbjct: 1 MANSGLQLLGYFLALGGWVGIIASTALPQWKQSSYAGDAIITAVGLYEGLWMSCASQSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ CK+YDS+LAL +Q+ RALMVV+++LGF+AM ++ +GMKCTR G + + K R+A+
Sbjct: 61 QVQCKLYDSLLALDGHIQSARALMVVAVLLGFVAMVLSVVGMKCTRVGDSNPIAKGRVAI 120
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG +FI+AGL L A SWY + +F+NP P N +YEFGPA+F+GWA + L +LGG+
Sbjct: 121 AGGALFILAGLCTLTAVSWYATLVTQEFFNPSTPVNARYEFGPALFVGWASAGLAVLGGS 180
Query: 181 LLSCSCPGNESKAGYRVPRSYPKSNSSKEYV 211
L C+CP E P S +++EYV
Sbjct: 181 FLCCTCPEPERPNSSPQPYRPGPSAAAREYV 211
>gi|183979973 claudin 19 isoform a [Homo sapiens]
Length = 224
Score = 245 bits (626), Expect = 2e-65
Identities = 108/190 (56%), Positives = 145/190 (76%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MANSGLQLLG+ +AL GWVG++A TA+PQW+ SSYAGD IITA +Y+GLWM C +QSTG
Sbjct: 1 MANSGLQLLGYFLALGGWVGIIASTALPQWKQSSYAGDAIITAVGLYEGLWMSCASQSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ CK+YDS+LAL +Q+ RALMVV+++LGF+AM ++ +GMKCTR G + + K R+A+
Sbjct: 61 QVQCKLYDSLLALDGHIQSARALMVVAVLLGFVAMVLSVVGMKCTRVGDSNPIAKGRVAI 120
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG +FI+AGL L A SWY + +F+NP P N +YEFGPA+F+GWA + L +LGG+
Sbjct: 121 AGGALFILAGLCTLTAVSWYATLVTQEFFNPSTPVNARYEFGPALFVGWASAGLAVLGGS 180
Query: 181 LLSCSCPGNE 190
L C+CP E
Sbjct: 181 FLCCTCPEPE 190
>gi|4502877 claudin 4 [Homo sapiens]
Length = 209
Score = 209 bits (533), Expect = 1e-54
Identities = 93/208 (44%), Positives = 145/208 (69%), Gaps = 4/208 (1%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA+ GLQ++G ++A+LGW+ ++ C A+P W+++++ G NI+T+Q +++GLWM+CV QSTG
Sbjct: 1 MASMGLQVMGIALAVLGWLAVMLCCALPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
M CK+YDS+LAL LQA RAL+++S+++ L + ++ +G KCT C +D+ KA+ +
Sbjct: 61 QMQCKVYDSLLALPQDLQAARALVIISIIVAALGVLLSVVGGKCTNC-LEDESAKAKTMI 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
G++F++AGL +V SW H I+ DFYNPL+ + K E G ++++GWA S L++LGG
Sbjct: 120 VAGVVFLLAGLMVIVPVSWTAHNIIQDFYNPLVASGQKREMGASLYVGWAASGLLLLGGG 179
Query: 181 LLSCSCPGNESK---AGYRVPRSYPKSN 205
LL C+CP K A Y RS SN
Sbjct: 180 LLCCNCPPRTDKPYSAKYSAARSAAASN 207
>gi|4502875 claudin 3 [Homo sapiens]
Length = 220
Score = 208 bits (530), Expect = 2e-54
Identities = 97/201 (48%), Positives = 139/201 (69%), Gaps = 6/201 (2%)
Query: 5 GLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMSC 64
GL++ G ++A+LGW+G + C A+P W++S++ G NIIT+Q +++GLWM+CV QSTG M C
Sbjct: 4 GLEITGTALAVLGWLGTIVCCALPMWRVSAFIGSNIITSQNIWEGLWMNCVVQSTGQMQC 63
Query: 65 KMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGGGI 124
K+YDS+LAL LQA RAL+VV+++L + VA +G +CT C DD KA+I + G+
Sbjct: 64 KVYDSLLALPQDLQAARALIVVAILLAAFGLLVALVGAQCTNCVQDD-TAKAKITIVAGV 122
Query: 125 IFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGALLSC 184
+F++A L LV SW + I+ DFYNP++P K E G +++GWA +AL +LGGALL C
Sbjct: 123 LFLLAALLTLVPVSWSANTIIRDFYNPVVPEAQKREMGAGLYVGWAAAALQLLGGALLCC 182
Query: 185 SCPGNE-----SKAGYRVPRS 200
SCP E +K Y PRS
Sbjct: 183 SCPPREKKYTATKVVYSAPRS 203
>gi|11141861 claudin 9 [Homo sapiens]
Length = 217
Score = 205 bits (522), Expect = 2e-53
Identities = 96/218 (44%), Positives = 147/218 (67%), Gaps = 8/218 (3%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA++GL+LLG ++A+LGW+G + A+P W+++++ G++I+ AQ +++GLWM CV QSTG
Sbjct: 1 MASTGLELLGMTLAVLGWLGTLVSCALPLWKVTAFIGNSIVVAQVVWEGLWMSCVVQSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
M CK+YDS+LAL LQA RAL V++L+L L + VA G +CT C +D+ KARI +
Sbjct: 61 QMQCKVYDSLLALPQDLQAARALCVIALLLALLGLLVAITGAQCTTC-VEDEGAKARIVL 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
G+I ++AG+ L+ W H I+ DFYNPL+ +K E G ++++GWA +AL++LGG
Sbjct: 120 TAGVILLLAGILVLIPVCWTAHAIIQDFYNPLVAEALKRELGASLYLGWAAAALLMLGGG 179
Query: 181 LLSCSCPGNE------SKAGYRVP-RSYPKSNSSKEYV 211
LL C+CP + + GY +P RS ++YV
Sbjct: 180 LLCCTCPPPQVERPRGPRLGYSIPSRSGASGLDKRDYV 217
>gi|153792768 claudin 6 [Homo sapiens]
Length = 220
Score = 198 bits (504), Expect = 2e-51
Identities = 96/220 (43%), Positives = 143/220 (65%), Gaps = 17/220 (7%)
Query: 1 MANSGLQLLGFSMALLGWV-GLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQST 59
MA++G+Q+LG + LLGWV GLV+C A+P W+++++ G++I+ AQ +++GLWM CV QST
Sbjct: 1 MASAGMQILGVVLTLLGWVNGLVSC-ALPMWKVTAFIGNSIVVAQVVWEGLWMSCVVQST 59
Query: 60 GMMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIA 119
G M CK+YDS+LAL LQA RAL V++L++ + V G KCT C ++K KAR+
Sbjct: 60 GQMQCKVYDSLLALPQDLQAARALCVIALLVALFGLLVYLAGAKCTTC-VEEKDSKARLV 118
Query: 120 MGGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGG 179
+ GI+F+++G+ L+ W H I+ DFYNPL+ K E G ++++GWA S L++LGG
Sbjct: 119 LTSGIVFVISGVLTLIPVCWTAHAIIRDFYNPLVAEAQKRELGASLYLGWAASGLLLLGG 178
Query: 180 ALLSCSCP--GNESKAGY------------RVPRSYPKSN 205
LL C+CP G++ + Y R P YP N
Sbjct: 179 GLLCCTCPSGGSQGPSHYMARYSTSAPAISRGPSEYPTKN 218
>gi|195947374 claudin 5 [Homo sapiens]
Length = 303
Score = 194 bits (494), Expect = 4e-50
Identities = 87/184 (47%), Positives = 128/184 (69%), Gaps = 1/184 (0%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
M ++ L++LG + L+GW GL+ +P WQ++++ NI+TAQ +KGLWM CV QSTG
Sbjct: 86 MGSAALEILGLVLCLVGWGGLILACGLPMWQVTAFLDHNIVTAQTTWKGLWMSCVVQSTG 145
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
M CK+YDSVLALS +QA RAL V +++L F+A+FV G +CT C KAR+A+
Sbjct: 146 HMQCKVYDSVLALSTEVQAARALTVSAVLLAFVALFVTLAGAQCTTCVAPGPA-KARVAL 204
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG++++ GL ALV W+ + +V +FY+P +P + KYE G A++IGWA +AL+++GG
Sbjct: 205 TGGVLYLFCGLLALVPLCWFANIVVREFYDPSVPVSQKYELGAALYIGWAATALLMVGGC 264
Query: 181 LLSC 184
LL C
Sbjct: 265 LLCC 268
>gi|195947372 claudin 5 [Homo sapiens]
Length = 303
Score = 194 bits (494), Expect = 4e-50
Identities = 87/184 (47%), Positives = 128/184 (69%), Gaps = 1/184 (0%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
M ++ L++LG + L+GW GL+ +P WQ++++ NI+TAQ +KGLWM CV QSTG
Sbjct: 86 MGSAALEILGLVLCLVGWGGLILACGLPMWQVTAFLDHNIVTAQTTWKGLWMSCVVQSTG 145
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
M CK+YDSVLALS +QA RAL V +++L F+A+FV G +CT C KAR+A+
Sbjct: 146 HMQCKVYDSVLALSTEVQAARALTVSAVLLAFVALFVTLAGAQCTTCVAPGPA-KARVAL 204
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG++++ GL ALV W+ + +V +FY+P +P + KYE G A++IGWA +AL+++GG
Sbjct: 205 TGGVLYLFCGLLALVPLCWFANIVVREFYDPSVPVSQKYELGAALYIGWAATALLMVGGC 264
Query: 181 LLSC 184
LL C
Sbjct: 265 LLCC 268
>gi|225703142 claudin 14 [Homo sapiens]
Length = 239
Score = 184 bits (468), Expect = 4e-47
Identities = 91/207 (43%), Positives = 139/207 (67%), Gaps = 4/207 (1%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA++ +QLLGF ++ LG VG + T +P W+ +++ G NI+TA + KGLWM+CV STG
Sbjct: 1 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ C++Y S+LAL LQA RALMV+S +L +A A +GMKCTRC K A+
Sbjct: 61 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPA-KTTFAI 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG +FI+AGL +VA SW + +V +FYNPL+P+ +K+E G A+++G+ S+L ++GG
Sbjct: 120 LGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGT 179
Query: 181 LLSCSCPGNESKAGYRVPRSYPKSNSS 207
LL SC + +A YR ++ P++ ++
Sbjct: 180 LLCLSC---QDEAPYRPYQAPPRATTT 203
>gi|21536294 claudin 14 [Homo sapiens]
Length = 239
Score = 184 bits (468), Expect = 4e-47
Identities = 91/207 (43%), Positives = 139/207 (67%), Gaps = 4/207 (1%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA++ +QLLGF ++ LG VG + T +P W+ +++ G NI+TA + KGLWM+CV STG
Sbjct: 1 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ C++Y S+LAL LQA RALMV+S +L +A A +GMKCTRC K A+
Sbjct: 61 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPA-KTTFAI 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG +FI+AGL +VA SW + +V +FYNPL+P+ +K+E G A+++G+ S+L ++GG
Sbjct: 120 LGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGT 179
Query: 181 LLSCSCPGNESKAGYRVPRSYPKSNSS 207
LL SC + +A YR ++ P++ ++
Sbjct: 180 LLCLSC---QDEAPYRPYQAPPRATTT 203
>gi|225703138 claudin 14 [Homo sapiens]
Length = 239
Score = 184 bits (468), Expect = 4e-47
Identities = 91/207 (43%), Positives = 139/207 (67%), Gaps = 4/207 (1%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA++ +QLLGF ++ LG VG + T +P W+ +++ G NI+TA + KGLWM+CV STG
Sbjct: 1 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ C++Y S+LAL LQA RALMV+S +L +A A +GMKCTRC K A+
Sbjct: 61 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPA-KTTFAI 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG +FI+AGL +VA SW + +V +FYNPL+P+ +K+E G A+++G+ S+L ++GG
Sbjct: 120 LGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGT 179
Query: 181 LLSCSCPGNESKAGYRVPRSYPKSNSS 207
LL SC + +A YR ++ P++ ++
Sbjct: 180 LLCLSC---QDEAPYRPYQAPPRATTT 203
>gi|6912314 claudin 14 [Homo sapiens]
Length = 239
Score = 184 bits (468), Expect = 4e-47
Identities = 91/207 (43%), Positives = 139/207 (67%), Gaps = 4/207 (1%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA++ +QLLGF ++ LG VG + T +P W+ +++ G NI+TA + KGLWM+CV STG
Sbjct: 1 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ C++Y S+LAL LQA RALMV+S +L +A A +GMKCTRC K A+
Sbjct: 61 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPA-KTTFAI 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG +FI+AGL +VA SW + +V +FYNPL+P+ +K+E G A+++G+ S+L ++GG
Sbjct: 120 LGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGT 179
Query: 181 LLSCSCPGNESKAGYRVPRSYPKSNSS 207
LL SC + +A YR ++ P++ ++
Sbjct: 180 LLCLSC---QDEAPYRPYQAPPRATTT 203
>gi|225703140 claudin 14 [Homo sapiens]
Length = 239
Score = 184 bits (468), Expect = 4e-47
Identities = 91/207 (43%), Positives = 139/207 (67%), Gaps = 4/207 (1%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA++ +QLLGF ++ LG VG + T +P W+ +++ G NI+TA + KGLWM+CV STG
Sbjct: 1 MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ C++Y S+LAL LQA RALMV+S +L +A A +GMKCTRC K A+
Sbjct: 61 IYQCQIYRSLLALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPA-KTTFAI 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG +FI+AGL +VA SW + +V +FYNPL+P+ +K+E G A+++G+ S+L ++GG
Sbjct: 120 LGGTLFILAGLLCMVAVSWTTNDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGT 179
Query: 181 LLSCSCPGNESKAGYRVPRSYPKSNSS 207
LL SC + +A YR ++ P++ ++
Sbjct: 180 LLCLSC---QDEAPYRPYQAPPRATTT 203
>gi|40788011 claudin 8 [Homo sapiens]
Length = 225
Score = 184 bits (466), Expect = 6e-47
Identities = 86/196 (43%), Positives = 126/196 (64%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA L++ G + +G VG VA T +PQW++S++ +NI+ + ++GLWM+CV Q+
Sbjct: 1 MATHALEIAGLFLGGVGMVGTVAVTVMPQWRVSAFIENNIVVFENFWEGLWMNCVRQANI 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
M CK+YDS+LALS LQA R LM + V+ FLA +A +GMKCTRC GD++ KA I +
Sbjct: 61 RMQCKIYDSLLALSPDLQAARGLMCAASVMSFLAFMMAILGMKCTRCTGDNEKVKAHILL 120
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GIIFI+ G+ L+ SW + I+ DFYN ++ K E G A+++GW + ++I+GGA
Sbjct: 121 TAGIIFIITGMVVLIPVSWVANAIIRDFYNSIVNVAQKRELGEALYLGWTTALVLIVGGA 180
Query: 181 LLSCSCPGNESKAGYR 196
L C NE + YR
Sbjct: 181 LFCCVFCCNEKSSSYR 196
>gi|6912316 claudin 17 [Homo sapiens]
Length = 224
Score = 174 bits (441), Expect = 5e-44
Identities = 82/198 (41%), Positives = 122/198 (61%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA LQ+ G + LG VG +A T +PQW++S++ G NII + +++GLWM+C+ Q+
Sbjct: 1 MAFYPLQIAGLVLGFLGMVGTLATTLLPQWRVSAFVGSNIIVFERLWEGLWMNCIRQARV 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ CK Y S+LAL AL+ RALM V++ L +A+ + GMK +C G ++ KA +
Sbjct: 61 RLQCKFYSSLLALPPALETARALMCVAVALSLIALLIGICGMKQVQCTGSNERAKAYLLG 120
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
G++FI+ G+ L+ SW + I+ DFYNP I K E G A+F+GWA +A++ +GG
Sbjct: 121 TSGVLFILTGIFVLIPVSWTANIIIRDFYNPAIHIGQKRELGAALFLGWASAAVLFIGGG 180
Query: 181 LLSCSCPGNESKAGYRVP 198
LL C N K GYR P
Sbjct: 181 LLCGFCCCNRKKQGYRYP 198
>gi|9966781 claudin 2 [Homo sapiens]
Length = 230
Score = 167 bits (423), Expect = 6e-42
Identities = 76/195 (38%), Positives = 122/195 (62%), Gaps = 1/195 (0%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA+ GLQL+G+ + LLG +G + +P W+ SSY G +I+TA KGLWM+C T STG
Sbjct: 1 MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAVGFSKGLWMECATHSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ C +Y ++L L A +QA +A+MV S + LA ++ +GM+CT + + K R+A+
Sbjct: 61 ITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGMRCTVFCQESRAKD-RVAV 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG+ FI+ GL + +W H I+ DFY+PL+P ++K+E G A+++G S ++ G
Sbjct: 120 AGGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGI 179
Query: 181 LLSCSCPGNESKAGY 195
+L SC +++ Y
Sbjct: 180 ILCFSCSSQRNRSNY 194
>gi|47716519 claudin 20 [Homo sapiens]
Length = 219
Score = 162 bits (409), Expect = 3e-40
Identities = 83/209 (39%), Positives = 126/209 (60%), Gaps = 1/209 (0%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA++GLQLL F +AL G G++ T +P W+++ NIITA GLWMDC STG
Sbjct: 1 MASAGLQLLAFILALSGVSGVLTATLLPNWKVNVDVDSNIITAIVQLHGLWMDCTWYSTG 60
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
M SC + S+L+L +QA RA MV++ VL L + +T+GMKCTR GG D+ K+ +
Sbjct: 61 MFSCALKHSILSLPIHVQAARATMVLACVLSALGICTSTVGMKCTRLGG-DRETKSHASF 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GG+ F+ AG+++L++ WY +I+ +F + +P + K+E G AI+IG+ + L+ + G
Sbjct: 120 AGGVCFMSAGISSLISTVWYTKEIIANFLDLTVPESNKHEPGGAIYIGFISAMLLFISGM 179
Query: 181 LLSCSCPGNESKAGYRVPRSYPKSNSSKE 209
+ SC +A P P SN+ E
Sbjct: 180 IFCTSCIKRNPEARLDPPTQQPISNTQLE 208
>gi|5921465 claudin 10 isoform b [Homo sapiens]
Length = 228
Score = 158 bits (399), Expect = 4e-39
Identities = 79/195 (40%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA++ +++ F +++ GWV + + W++S+ G +IT + LW CVT STG
Sbjct: 1 MASTASEIIAFMVSISGWVLVSSTLPTDYWKVSTIDG-TVITTATYWANLWKACVTDSTG 59
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
+ +CK + S+LAL +QA R LM+ ++ LGF A GMKCT+ GG DK KA+IA
Sbjct: 60 VSNCKDFPSMLALDGYIQACRGLMIAAVSLGFFGSIFALFGMKCTKVGGSDKA-KAKIAC 118
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGA 180
GI+FI++GL ++ CS Y ++I T+F++PL KYE G A+FIGWAG++L I+GG
Sbjct: 119 LAGIVFILSGLCSMTGCSLYANKITTEFFDPLF-VEQKYELGAALFIGWAGASLCIIGGV 177
Query: 181 LLSCSCPGNESKAGY 195
+ S N Y
Sbjct: 178 IFCFSISDNNKTPRY 192
>gi|7656981 claudin 15 [Homo sapiens]
Length = 228
Score = 154 bits (388), Expect = 7e-38
Identities = 81/212 (38%), Positives = 125/212 (58%), Gaps = 10/212 (4%)
Query: 6 LQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMSCK 65
++ GF MA +G + L W++S+ G N+IT +++ LW C T S G+ +C
Sbjct: 5 VETFGFFMATVGLLMLGVTLPNSYWRVSTVHG-NVITTNTIFENLWFSCATDSLGVYNCW 63
Query: 66 MYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGGGII 125
+ S+LALS +QA RALM+ +++LGFL + + G++CT GG + +KA++A G +
Sbjct: 64 EFPSMLALSGYIQACRALMITAILLGFLGLLLGIAGLRCTNIGGLELSRKAKLAATAGAL 123
Query: 126 FIVAGLAALVACSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGALL--S 183
I+AG+ +VA SWY I DF++PL P KYE GPA+++GW+ S + ILGG L +
Sbjct: 124 HILAGICGMVAISWYAFNITRDFFDPLYP-GTKYELGPALYLGWSASLISILGGLCLCSA 182
Query: 184 CSCPGNESKAG-----YRVPRS-YPKSNSSKE 209
C C +E A Y+ P S P + S +E
Sbjct: 183 CCCGSDEDPAASARRPYQAPVSVMPVATSDQE 214
>gi|33598916 claudin 10 isoform a [Homo sapiens]
Length = 226
Score = 145 bits (367), Expect = 2e-35
Identities = 72/179 (40%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 17 GWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMSCKMYDSVLALSAA 76
G+ LVA T +W++++ A ++ITA +Y+GLWM+C + G C+ + ++ ++
Sbjct: 15 GFGALVAATTSNEWKVTTRAS-SVITATWVYQGLWMNCAGNALGSFHCRPHFTIFKVAGY 73
Query: 77 LQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGGGIIFIVAGLAALVA 136
+QA R LM+ ++ LGF A GMKCT+ GG DK KA+IA GI+FI++GL ++
Sbjct: 74 IQACRGLMIAAVSLGFFGSIFALFGMKCTKVGGSDKA-KAKIACLAGIVFILSGLCSMTG 132
Query: 137 CSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGALLSCSCPGNESKAGY 195
CS Y ++I T+F++PL KYE G A+FIGWAG++L I+GG + S N Y
Sbjct: 133 CSLYANKITTEFFDPLF-VEQKYELGAALFIGWAGASLCIIGGVIFCFSISDNNKTPRY 190
>gi|50345279 claudin 18 isoform 2 [Homo sapiens]
Length = 261
Score = 141 bits (356), Expect = 4e-34
Identities = 77/221 (34%), Positives = 120/221 (54%), Gaps = 12/221 (5%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
MA + Q LGF ++L+G G++A T + QW +N +TA Y+GLW CV +S+G
Sbjct: 1 MAVTACQGLGFVVSLIGIAGIIAATCMDQWSTQDLY-NNPVTAVFNYQGLWRSCVRESSG 59
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
C+ Y ++L L A LQA RALM+V +VLG + + V+ +KC R G + KA + +
Sbjct: 60 FTECRGYFTLLGLPAMLQAVRALMIVGIVLGAIGLLVSIFALKCIRIGSMEDSAKANMTL 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFY----------NPLIPT-NIKYEFGPAIFIGW 169
GI+FIV+GL A+ S + + +VT+F+ ++ T +Y FG A+F+GW
Sbjct: 120 TSGIMFIVSGLCAIAGVSVFANMLVTNFWMSTANMYTGMGGMVQTVQTRYTFGAALFVGW 179
Query: 170 AGSALVILGGALLSCSCPGNESKAGYRVPRSYPKSNSSKEY 210
L ++GG ++ +C G + SY S S Y
Sbjct: 180 VAGGLTLIGGVMMCIACRGLAPEETNYKAVSYHASGHSVAY 220
>gi|7705961 claudin 18 isoform 1 [Homo sapiens]
Length = 261
Score = 140 bits (354), Expect = 6e-34
Identities = 74/221 (33%), Positives = 118/221 (53%), Gaps = 12/221 (5%)
Query: 1 MANSGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTG 60
M+ + Q++ F +++LG G +A T + W DN +T+ Y+GLW CV QS+G
Sbjct: 1 MSTTTCQVVAFLLSILGLAGCIAATGMDMWSTQDLY-DNPVTSVFQYEGLWRSCVRQSSG 59
Query: 61 MMSCKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAM 120
C+ Y ++L L A LQA RALM+V +VLG + + V+ +KC R G + KA + +
Sbjct: 60 FTECRPYFTILGLPAMLQAVRALMIVGIVLGAIGLLVSIFALKCIRIGSMEDSAKANMTL 119
Query: 121 GGGIIFIVAGLAALVACSWYGHQIVTDFY----------NPLIPT-NIKYEFGPAIFIGW 169
GI+FIV+GL A+ S + + +VT+F+ ++ T +Y FG A+F+GW
Sbjct: 120 TSGIMFIVSGLCAIAGVSVFANMLVTNFWMSTANMYTGMGGMVQTVQTRYTFGAALFVGW 179
Query: 170 AGSALVILGGALLSCSCPGNESKAGYRVPRSYPKSNSSKEY 210
L ++GG ++ +C G + SY S S Y
Sbjct: 180 VAGGLTLIGGVMMCIACRGLAPEETNYKAVSYHASGHSVAY 220
>gi|169166402 PREDICTED: claudin-24-like [Homo sapiens]
Length = 220
Score = 129 bits (323), Expect = 2e-30
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 4/183 (2%)
Query: 4 SGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMS 63
+ +Q +G ++LLGW+ + T +P W+ + ++ + GLW CV Q M
Sbjct: 7 TAMQSVGLLLSLLGWILSIITTYLPHWKNLNL---DLNEMENWTMGLWQTCVIQEEVGMQ 63
Query: 64 CKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGGG 123
CK +DS LAL A L+ +R LM +S LGFL + V+ G+ C R G + K R+ + GG
Sbjct: 64 CKDFDSFLALPAELRVSRILMFLSNGLGFLGLLVSGFGLDCLRIGESQRDLKRRLLILGG 123
Query: 124 IIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNI-KYEFGPAIFIGWAGSALVILGGALL 182
I+ +G+ ALV SW H+ V +F++ +P + ++EFG A+F+GW ++LGG LL
Sbjct: 124 ILSWASGITALVPVSWVAHKTVQEFWDENVPDFVPRWEFGEALFLGWFAGLSLLLGGCLL 183
Query: 183 SCS 185
+C+
Sbjct: 184 NCA 186
>gi|231569235 claudin 10 isoform a_i1 [Homo sapiens]
Length = 207
Score = 129 bits (323), Expect = 2e-30
Identities = 70/179 (39%), Positives = 103/179 (57%), Gaps = 22/179 (12%)
Query: 17 GWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMSCKMYDSVLALSAA 76
G+ LVA T +W++++ A ++ITA +Y+GLWM+C +
Sbjct: 15 GFGALVAATTSNEWKVTTRAS-SVITATWVYQGLWMNC-------------------AGY 54
Query: 77 LQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGGGIIFIVAGLAALVA 136
+QA R LM+ ++ LGF A GMKCT+ GG DK KA+IA GI+FI++GL ++
Sbjct: 55 IQACRGLMIAAVSLGFFGSIFALFGMKCTKVGGSDKA-KAKIACLAGIVFILSGLCSMTG 113
Query: 137 CSWYGHQIVTDFYNPLIPTNIKYEFGPAIFIGWAGSALVILGGALLSCSCPGNESKAGY 195
CS Y ++I T+F++PL KYE G A+FIGWAG++L I+GG + S N Y
Sbjct: 114 CSLYANKITTEFFDPLF-VEQKYELGAALFIGWAGASLCIIGGVIFCFSISDNNKTPRY 171
>gi|169167239 PREDICTED: claudin-24-like [Homo sapiens]
Length = 220
Score = 127 bits (319), Expect = 7e-30
Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 4 SGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMS 63
+ +Q +G ++ LGW+ + T +P W+ + ++ + GLW CV Q M
Sbjct: 7 TAMQSVGLLLSFLGWILSIITTYLPHWKNLNL---DLNEMENWTMGLWQTCVIQEEVGMQ 63
Query: 64 CKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGGG 123
CK +DS LAL A L+ +R LM +S LGFL + V+ G+ C R G + K R+ + GG
Sbjct: 64 CKDFDSFLALPAELRVSRILMFLSNGLGFLGLLVSGFGLDCLRIGESQRDLKRRLLILGG 123
Query: 124 IIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNI-KYEFGPAIFIGWAGSALVILGGALL 182
I+ +G+ ALV SW H+ V +F++ +P + ++EFG A+F+GW ++LGG LL
Sbjct: 124 ILSWASGITALVPVSWVAHKTVQEFWDENVPDFVPRWEFGEALFLGWFAGLSLLLGGCLL 183
Query: 183 SCS 185
+C+
Sbjct: 184 NCA 186
>gi|169166931 PREDICTED: claudin-24-like [Homo sapiens]
Length = 220
Score = 127 bits (319), Expect = 7e-30
Identities = 65/183 (35%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 4 SGLQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMS 63
+ +Q +G ++ LGW+ + T +P W+ + ++ + GLW CV Q M
Sbjct: 7 TAMQSVGLLLSFLGWILSIITTYLPHWKNLNL---DLNEMENWTMGLWQTCVIQEEVGMQ 63
Query: 64 CKMYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGGG 123
CK +DS LAL A L+ +R LM +S LGFL + V+ G+ C R G + K R+ + GG
Sbjct: 64 CKDFDSFLALPAELRVSRILMFLSNGLGFLGLLVSGFGLDCLRIGESQRDLKRRLLILGG 123
Query: 124 IIFIVAGLAALVACSWYGHQIVTDFYNPLIPTNI-KYEFGPAIFIGWAGSALVILGGALL 182
I+ +G+ ALV SW H+ V +F++ +P + ++EFG A+F+GW ++LGG LL
Sbjct: 124 ILSWASGITALVPVSWVAHKTVQEFWDENVPDFVPRWEFGEALFLGWFAGLSLLLGGCLL 183
Query: 183 SCS 185
+C+
Sbjct: 184 NCA 186
>gi|162417973 claudin 22 [Homo sapiens]
Length = 220
Score = 127 bits (318), Expect = 9e-30
Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 4/180 (2%)
Query: 7 QLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMSCKM 66
QL G S++LLGWV +P W+ + ++ + GLW CV Q M CK
Sbjct: 10 QLAGVSLSLLGWVLSCLTNYLPHWKNLNL---DLNEMENWTMGLWQTCVIQEEVGMQCKD 66
Query: 67 YDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGGGIIF 126
+DS LAL A L+ +R LM +S LGFL + V+ G+ C R G + K R+ + GGI+
Sbjct: 67 FDSFLALPAELRVSRILMFLSNGLGFLGLLVSGFGLDCLRIGESQRDLKRRLLILGGILS 126
Query: 127 IVAGLAALVACSWYGHQIVTDFYNPLIPTNI-KYEFGPAIFIGWAGSALVILGGALLSCS 185
+G+ ALV SW H+ V +F++ +P + ++EFG A+F+GW ++LGG LL C+
Sbjct: 127 WASGVTALVPVSWVAHKTVQEFWDENVPDFVPRWEFGEALFLGWFAGLSLLLGGCLLHCA 186
>gi|157820127 claudin-like [Homo sapiens]
Length = 229
Score = 104 bits (260), Expect = 5e-23
Identities = 69/202 (34%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 6 LQLLGFSMALLGWVGLVACTAIPQWQMSSYAGDNIITAQAMYKGLWMDCVTQSTGMMSCK 65
+QL G ++LLGWV T +PQW+ + + + T G+W CV + CK
Sbjct: 9 VQLGGLLLSLLGWVCSCVTTILPQWKTLNLELNEMET---WIMGIWEVCVDREEVATVCK 65
Query: 66 MYDSVLALSAALQATRALMVVSLVLGFLAMFVATMGMKCTRCGGDDKVKKARIAMGGGII 125
++S L+L LQ R LMV S LG L + + + G +C + V K R+ + G +
Sbjct: 66 AFESFLSLPQELQVARILMVASHGLGLLGLLLCSFGSECFQFHRIRWVFKRRLGLLGRTL 125
Query: 126 FIVAGLAALVACSWYGHQIVTDFYNPLIPTNI-KYEFGPAIFIGWAGSALVILGGALLSC 184
A L+ SW H + DF++ IP I ++EFG A+++GWA + LGG LL
Sbjct: 126 EASASATTLLPVSWVAHATIQDFWDDSIPDIIPRWEFGGALYLGWAAGIFLALGGLLLIF 185
Query: 185 S-CPGNES-----KAGYRVPRS 200
S C G E AG VP S
Sbjct: 186 SACLGKEDVPFPLMAGPTVPLS 207
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.136 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,258,362
Number of Sequences: 37866
Number of extensions: 276065
Number of successful extensions: 868
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 784
Number of HSP's gapped (non-prelim): 45
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.