Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 151301150
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens]
(688 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens] 1377 0.0
gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens] 642 0.0
gi|154689719 hypothetical protein LOC23231 [Homo sapiens] 154 3e-37
gi|217330658 hypothetical protein LOC9812 [Homo sapiens] 58 3e-08
gi|217330656 hypothetical protein LOC9812 [Homo sapiens] 58 3e-08
gi|33620759 LRP2 binding protein [Homo sapiens] 55 3e-07
gi|12751491 hypothetical protein LOC65260 [Homo sapiens] 49 1e-05
gi|56676397 ankyrin repeat domain 11 [Homo sapiens] 38 0.036
gi|14165274 golgi-associated microtubule-binding protein HOOK3 [... 37 0.047
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 36 0.14
gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.18
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.18
gi|169208016 PREDICTED: similar to golgi autoantigen, golgin sub... 35 0.18
gi|113425119 PREDICTED: similar to golgi autoantigen, golgin sub... 35 0.18
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein... 35 0.18
gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein... 35 0.18
gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein... 35 0.18
gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.18
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.18
gi|81295809 pericentrin [Homo sapiens] 35 0.18
gi|189011544 ubiquitously transcribed tetratricopeptide repeat, ... 34 0.40
gi|122937227 U2-associated SR140 protein [Homo sapiens] 34 0.40
gi|221219020 NYD-SP11 protein [Homo sapiens] 34 0.52
gi|75677376 coiled-coil domain containing 62 isoform b [Homo sap... 33 0.67
gi|30348972 coiled-coil domain containing 62 isoform a [Homo sap... 33 0.67
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 33 0.67
gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens] 33 0.88
gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-l... 33 0.88
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l... 33 0.88
gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-l... 33 0.88
>gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens]
Length = 688
Score = 1377 bits (3565), Expect = 0.0
Identities = 688/688 (100%), Positives = 688/688 (100%)
Query: 1 MKPLSLLIEILIILGVTIKTIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNV 60
MKPLSLLIEILIILGVTIKTIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNV
Sbjct: 1 MKPLSLLIEILIILGVTIKTIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNV 60
Query: 61 INKRENLLEKKKNQRKIRIKGIQNKDILKRNKNHLQKQAEKNFTDEGDQLFKMGIKVLQQ 120
INKRENLLEKKKNQRKIRIKGIQNKDILKRNKNHLQKQAEKNFTDEGDQLFKMGIKVLQQ
Sbjct: 61 INKRENLLEKKKNQRKIRIKGIQNKDILKRNKNHLQKQAEKNFTDEGDQLFKMGIKVLQQ 120
Query: 121 SKSQKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNITAAIQLYESLAKEGSCK 180
SKSQKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNITAAIQLYESLAKEGSCK
Sbjct: 121 SKSQKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNITAAIQLYESLAKEGSCK 180
Query: 181 AQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALS 240
AQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALS
Sbjct: 181 AQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALS 240
Query: 241 YYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQ 300
YYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQ
Sbjct: 241 YYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQ 300
Query: 301 VSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFK 360
VSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFK
Sbjct: 301 VSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFK 360
Query: 361 YFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSG 420
YFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSG
Sbjct: 361 YFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSG 420
Query: 421 SGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHWA 480
SGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHWA
Sbjct: 421 SGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHWA 480
Query: 481 EKFLTAYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALL 540
EKFLTAYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALL
Sbjct: 481 EKFLTAYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALL 540
Query: 541 LWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYHNAQAMFNLAYMYEH 600
LWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYHNAQAMFNLAYMYEH
Sbjct: 541 LWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYHNAQAMFNLAYMYEH 600
Query: 601 GLGITKDIHLARRLYDMAAQTSPDAHIPVLFAVMKLETTHLLRDILFFNFTTRWNWLKLD 660
GLGITKDIHLARRLYDMAAQTSPDAHIPVLFAVMKLETTHLLRDILFFNFTTRWNWLKLD
Sbjct: 601 GLGITKDIHLARRLYDMAAQTSPDAHIPVLFAVMKLETTHLLRDILFFNFTTRWNWLKLD 660
Query: 661 NTIGPHWDLFVIGLIVPGLILLLRNHHG 688
NTIGPHWDLFVIGLIVPGLILLLRNHHG
Sbjct: 661 NTIGPHWDLFVIGLIVPGLILLLRNHHG 688
>gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]
Length = 794
Score = 642 bits (1657), Expect = 0.0
Identities = 309/580 (53%), Positives = 425/580 (73%)
Query: 96 QKQAEKNFTDEGDQLFKMGIKVLQQSKSQKQKEEAYLLFAKAADMGNLKAMEKMADALLF 155
++ A++ E + +++ G+K+L S + QK EAY KAA M + KA+E+++ ALLF
Sbjct: 172 EEAAKRRQMQEAEMMYQTGMKILNGSNKKSQKREAYRYLQKAASMNHTKALERVSYALLF 231
Query: 156 GNFGVQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNM 215
G++ QNI AA +++E L +EGS K Q ALGFL + G+G+ QAKAL+YYTFG+ GGN+
Sbjct: 232 GDYLPQNIQAAREMFEKLTEEGSPKGQTALGFLYASGLGVNSSQAKALVYYTFGALGGNL 291
Query: 216 MSQMILGYRYLSGINVLQNCEVALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSS 275
++ M+LGYRY +GI VLQ+CE AL++Y+ VA+++A + G V+++RL + EN
Sbjct: 292 IAHMVLGYRYWAGIGVLQSCESALTHYRLVANHVASDISLTGGSVVQRIRLPDEVENPGM 351
Query: 276 NSEILDWDIYQYYKFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSAN 335
NS +L+ D+ QYY+FLAE+GDVQ QV LGQLHL G +G++Q++ +A YF AA AG+++
Sbjct: 352 NSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSH 411
Query: 336 AMAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEAL 395
AMAF+GKMY EG+ VPQ+N TA YF AA GN +G GLG+ Y +G+GV +NY AL
Sbjct: 412 AMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLAL 471
Query: 396 KYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYAT 455
KYFQKAAE+GW D Q QLG MYY+G G+ +DYK A KYF LASQ G LA Y LA+M+A+
Sbjct: 472 KYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHAS 531
Query: 456 GTGVVRSCRTAVELYKGVCELGHWAEKFLTAYFAYKDGDIDSSLVQYALLAEMGYEVAQS 515
GTGV+RSC TAVEL+K VCE G W+E+ +TAY +YKDGD +++++QY LLAE GYEVAQS
Sbjct: 532 GTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDGDYNAAVIQYLLLAEQGYEVAQS 591
Query: 516 NSAFILESKKANILEKEKMYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAA 575
N+AFIL+ ++A+I+ + + YP ALL WNRAA QG AR+K+GDYH+YG+GT DY+TA
Sbjct: 592 NAAFILDQREASIVGENETYPRALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDYETAF 651
Query: 576 THYSIAANKYHNAQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQTSPDAHIPVLFAVMK 635
HY +A+ + H+AQAMFNL YM+E GLGI +DIHLA+R YDMAA+ SPDA +PV A+ K
Sbjct: 652 IHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPDAQVPVFLALCK 711
Query: 636 LETTHLLRDILFFNFTTRWNWLKLDNTIGPHWDLFVIGLI 675
L + L+ I N + L +D +GP WDL+++ +I
Sbjct: 712 LGVVYFLQYIRETNIRDMFTQLDMDQLLGPEWDLYLMTII 751
>gi|154689719 hypothetical protein LOC23231 [Homo sapiens]
Length = 1132
Score = 154 bits (388), Expect = 3e-37
Identities = 147/520 (28%), Positives = 237/520 (45%), Gaps = 40/520 (7%)
Query: 100 EKNFTDEGDQLFKMGIKVLQQSKSQKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFG 159
EK D+ LF+ +++ + + Q E + K + KA+++++ G
Sbjct: 500 EKELKDKHPSLFQALLEMDLLTVPRNQNESVSEIGGKIFE----KAVKRLSSI-----DG 550
Query: 160 VQNITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQM 219
+ I++ + + G KA L G+ + DQ + ++Y G G +S M
Sbjct: 551 LHQISSIVPFLTDSSCCGYHKASYYLAVFYETGLNVPRDQLQGMLYSLVGGQGSERLSSM 610
Query: 220 ILGYRYLSGI-NVLQNCEVALSYYKKVADYIADTFEKSEG--VPVEKVRLTERPENLSSN 276
LGY++ GI N + E++ +YY +A +G VE +RL +
Sbjct: 611 NLGYKHYQGIDNYPLDWELSYAYYSNIATKTPLDQHTLQGDQAYVETIRLKDDEILKVQT 670
Query: 277 SEILDWDIYQYYKFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANA 336
E D D++ + K A RG+ Q L Q+ G++G+ ++ A+ ++ K A A
Sbjct: 671 KE--DGDVFMWLKHEATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPA 728
Query: 337 MAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALK 396
+ + + L V +N A + AASKG ++GLG Y K NYA+A K
Sbjct: 729 LIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFK---KNYAKAAK 785
Query: 397 YFQKAAEKGWPDAQFQLGFMYYSG--SGI-WKDYKLAFKYFYLASQSGQPLAIYYLAKMY 453
Y+ KA E G PDA + LG ++ G G+ ++ LA +YF+ A+Q G + + Y
Sbjct: 786 YWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYY 845
Query: 454 ATGT--GVVRSCRTAVELYKGVCE----LGHWAEKFLTAYFAYKDGDIDSSLVQYALLAE 507
TG R AV K V E LGH K L AY +G +L+ Y L AE
Sbjct: 846 ITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYL---EGSWHEALLYYVLAAE 902
Query: 508 MGYEVAQSNSAFILESKKANILEKEKMYPMALLLW---NRAAIQGNA--FARVKIGDYHY 562
G EV+Q+N A I E + + + Y +W N + Q +A FA +K+GD +Y
Sbjct: 903 TGIEVSQTNLAHICEERP----DLARRYLGVNCVWRYYNFSVFQIDAPSFAYLKMGDLYY 958
Query: 563 YGY-GTKKDYQTAATHYSIAANKYHNAQAMFNLAYMYEHG 601
YG+ +D + + Y+ AA ++Q FNLA + E G
Sbjct: 959 YGHQNQSQDLELSVQMYAQAALD-GDSQGFFNLALLIEEG 997
>gi|217330658 hypothetical protein LOC9812 [Homo sapiens]
Length = 515
Score = 58.2 bits (139), Expect = 3e-08
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 37/173 (21%)
Query: 354 NNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQL 413
++ AF YF AA++G + + GL + HG+G P + ++A+ Y+Q AA +G AQ++
Sbjct: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
Query: 414 G---------------------FMYYSGSGI---------------WKDYKLAFKYFYLA 437
+ SG+ + D + A KY +LA
Sbjct: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLA 379
Query: 438 SQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGH-WAEKFLTAYFA 489
+ +G + Y+L Y G GV R+ A+ Y+ LG+ A++ L A F+
Sbjct: 380 ANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFS 432
Score = 50.1 bits (118), Expect = 7e-06
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 238 ALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDV 297
A SY++K A + + G+ E R T P ++S YY+ A +G
Sbjct: 264 AFSYFQKAAARGYSKAQYNAGLCHEHGRGT--PRDISK--------AVLYYQLAASQGHS 313
Query: 298 QIQVSLGQLHLIG-RKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNA 356
Q + L + + +A+ +AA +G A AF+G ++ + Q
Sbjct: 314 LAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQR-- 371
Query: 357 TAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFM 416
A KY +AA+ G++ + LG+ Y G GV N EAL+ +Q++A G AQ +L +
Sbjct: 372 -AVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRAL 430
Query: 417 YYSGS 421
+ G+
Sbjct: 431 FSMGA 435
Score = 48.5 bits (114), Expect = 2e-05
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 7/164 (4%)
Query: 390 NYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYL 449
++ A YFQKAA +G+ AQ+ G + G G +D A Y+ LA+ G LA Y
Sbjct: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
Query: 450 AK--MYATGTGVVRSCRTAVELYKGVCELG-HWAEKFLTAYFAYKDGDIDSSLVQYALLA 506
A+ + + + AV L K + G A+ FL F + + V+Y LA
Sbjct: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLA 379
Query: 507 EMGYEVAQSNSAFILESK----KANILEKEKMYPMALLLWNRAA 546
+ I K + N+ E + Y + L N AA
Sbjct: 380 ANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAA 423
Score = 46.2 bits (108), Expect = 1e-04
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 120 QSKSQKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNI-----TAAIQLYESLA 174
Q +K+++++ L + A + +++ + +++ ++ F G +N+ TAA ++ A
Sbjct: 214 QPTGEKEQDKSKTLSLEEA-VTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAA 272
Query: 175 KEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGI----- 229
G KAQ G +G G D +KA++YY ++ G+ ++Q YRY +
Sbjct: 273 ARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQ----YRYARCLLRDPA 328
Query: 230 -NVLQNCEVALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYY 288
+ + A+S K+ AD + GV K + + +Y
Sbjct: 329 SSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAV------------KYL 376
Query: 289 KFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGN 348
A GD Q + LG + G G+ ++ +AL + ++A G+ A + ++ G
Sbjct: 377 WLAANNGDSQSRYHLGICYEKG-LGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMGA 435
Query: 349 AAVPQNN--ATAFKYFS 363
AA ++ T K FS
Sbjct: 436 AAPGPSDLTVTGLKSFS 452
Score = 45.8 bits (107), Expect = 1e-04
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 43/203 (21%)
Query: 426 DYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHWAEKFLT 485
D+ AF YF A+ G A Y + G G R
Sbjct: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPR------------------------ 295
Query: 486 AYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALLLWNRA 545
DI +++ Y L A G+ +AQ A L A+ E+ ++LL +A
Sbjct: 296 --------DISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLL--KQA 345
Query: 546 AIQGNAFARVKIGDYHYYGYGTKKDY---QTAATHYSIAANKYHNAQAMFNLAYMYEHGL 602
A G A+ +G TK+ Y Q A + +AAN ++Q+ ++L YE GL
Sbjct: 346 ADSGLREAQAFLGVLF-----TKEPYLDEQRAVKYLWLAANN-GDSQSRYHLGICYEKGL 399
Query: 603 GITKDIHLARRLYDMAAQTSPDA 625
G+ +++ A R Y +A +A
Sbjct: 400 GVQRNLGEALRCYQQSAALGNEA 422
>gi|217330656 hypothetical protein LOC9812 [Homo sapiens]
Length = 515
Score = 58.2 bits (139), Expect = 3e-08
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 37/173 (21%)
Query: 354 NNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQL 413
++ AF YF AA++G + + GL + HG+G P + ++A+ Y+Q AA +G AQ++
Sbjct: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
Query: 414 G---------------------FMYYSGSGI---------------WKDYKLAFKYFYLA 437
+ SG+ + D + A KY +LA
Sbjct: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLA 379
Query: 438 SQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGH-WAEKFLTAYFA 489
+ +G + Y+L Y G GV R+ A+ Y+ LG+ A++ L A F+
Sbjct: 380 ANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFS 432
Score = 50.1 bits (118), Expect = 7e-06
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 238 ALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDV 297
A SY++K A + + G+ E R T P ++S YY+ A +G
Sbjct: 264 AFSYFQKAAARGYSKAQYNAGLCHEHGRGT--PRDISK--------AVLYYQLAASQGHS 313
Query: 298 QIQVSLGQLHLIG-RKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNA 356
Q + L + + +A+ +AA +G A AF+G ++ + Q
Sbjct: 314 LAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQR-- 371
Query: 357 TAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFM 416
A KY +AA+ G++ + LG+ Y G GV N EAL+ +Q++A G AQ +L +
Sbjct: 372 -AVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRAL 430
Query: 417 YYSGS 421
+ G+
Sbjct: 431 FSMGA 435
Score = 48.5 bits (114), Expect = 2e-05
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 7/164 (4%)
Query: 390 NYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYL 449
++ A YFQKAA +G+ AQ+ G + G G +D A Y+ LA+ G LA Y
Sbjct: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
Query: 450 AK--MYATGTGVVRSCRTAVELYKGVCELG-HWAEKFLTAYFAYKDGDIDSSLVQYALLA 506
A+ + + + AV L K + G A+ FL F + + V+Y LA
Sbjct: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAVKYLWLA 379
Query: 507 EMGYEVAQSNSAFILESK----KANILEKEKMYPMALLLWNRAA 546
+ I K + N+ E + Y + L N AA
Sbjct: 380 ANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAA 423
Score = 46.2 bits (108), Expect = 1e-04
Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 31/257 (12%)
Query: 120 QSKSQKQKEEAYLLFAKAADMGNLKAMEKMADALLFGNFGVQNI-----TAAIQLYESLA 174
Q +K+++++ L + A + +++ + +++ ++ F G +N+ TAA ++ A
Sbjct: 214 QPTGEKEQDKSKTLSLEEA-VTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAA 272
Query: 175 KEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGI----- 229
G KAQ G +G G D +KA++YY ++ G+ ++Q YRY +
Sbjct: 273 ARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQ----YRYARCLLRDPA 328
Query: 230 -NVLQNCEVALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYY 288
+ + A+S K+ AD + GV K + + +Y
Sbjct: 329 SSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYLDEQRAV------------KYL 376
Query: 289 KFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGN 348
A GD Q + LG + G G+ ++ +AL + ++A G+ A + ++ G
Sbjct: 377 WLAANNGDSQSRYHLGICYEKG-LGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMGA 435
Query: 349 AAVPQNN--ATAFKYFS 363
AA ++ T K FS
Sbjct: 436 AAPGPSDLTVTGLKSFS 452
Score = 45.8 bits (107), Expect = 1e-04
Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 43/203 (21%)
Query: 426 DYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHWAEKFLT 485
D+ AF YF A+ G A Y + G G R
Sbjct: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPR------------------------ 295
Query: 486 AYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALLLWNRA 545
DI +++ Y L A G+ +AQ A L A+ E+ ++LL +A
Sbjct: 296 --------DISKAVLYYQLAASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLL--KQA 345
Query: 546 AIQGNAFARVKIGDYHYYGYGTKKDY---QTAATHYSIAANKYHNAQAMFNLAYMYEHGL 602
A G A+ +G TK+ Y Q A + +AAN ++Q+ ++L YE GL
Sbjct: 346 ADSGLREAQAFLGVLF-----TKEPYLDEQRAVKYLWLAANN-GDSQSRYHLGICYEKGL 399
Query: 603 GITKDIHLARRLYDMAAQTSPDA 625
G+ +++ A R Y +A +A
Sbjct: 400 GVQRNLGEALRCYQQSAALGNEA 422
>gi|33620759 LRP2 binding protein [Homo sapiens]
Length = 347
Score = 54.7 bits (130), Expect = 3e-07
Identities = 69/278 (24%), Positives = 101/278 (36%), Gaps = 65/278 (23%)
Query: 221 LGYRYLSGINVLQNCEVALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEIL 280
LG Y G+ + E + Y KK+ D P K R
Sbjct: 96 LGVMYYDGLGTTLDAEKGVDYMKKILDS-----------PCPKAR--------------- 129
Query: 281 DWDIYQYYKFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAG----SANA 336
+ KF A +LG+ + G KG+ + +A +L AA G S A
Sbjct: 130 ------HLKFAAA-------YNLGRAYYEG-KGVKRSNEEAERLWLIAADNGNPKASVKA 175
Query: 337 MAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALK 396
+ +G Y + P+ AF + S A GN LGL+Y +G+G+ + AL+
Sbjct: 176 QSMLGLYY---STKEPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQ 232
Query: 397 YFQKAAEKGWPDAQFQLGFMYYSGSGIWK---------DYKLAFKYFYLASQS------- 440
++AAE+G AQ L YY K DY +A +
Sbjct: 233 CLREAAERGNVYAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFI 292
Query: 441 --GQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCEL 476
G +A +Y A+ G G+ R TA Y C L
Sbjct: 293 GRGMAMASFYHARCLQLGLGITRDETTAKHYYSKACRL 330
Score = 54.3 bits (129), Expect = 4e-07
Identities = 73/291 (25%), Positives = 111/291 (38%), Gaps = 49/291 (16%)
Query: 368 KGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDY 427
KG+ + G LYF Y EAL+ F++ EK A +QLG MYY G G D
Sbjct: 56 KGDTLAYFLRGQLYFEEGW----YEEALEQFEEIKEKDH-QATYQLGVMYYDGLGTTLDA 110
Query: 428 KLAFKYFYLASQSGQP-------LAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGH-- 478
+ Y S P A Y L + Y G GV RS A L+ + G+
Sbjct: 111 EKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPK 170
Query: 479 ---WAEKFLTAYFAYKD-GDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKM 534
A+ L Y++ K+ +++ + ++ G +S A L + ++
Sbjct: 171 ASVKAQSMLGLYYSTKEPKELEKAFYWHS--EACGNGNLESQGALGLMYLYGQGIRQDT- 227
Query: 535 YPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYHN------- 587
AL AA +GN +A+ + +Y+Y K + T +S Y
Sbjct: 228 -EAALQCLREAAERGNVYAQGNLVEYYY-----KMKFFTKCVAFSKRIADYDEVHDIPMI 281
Query: 588 ---------------AQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQTSP 623
A A F A + GLGIT+D A+ Y A + +P
Sbjct: 282 AQVTDCLPEFIGRGMAMASFYHARCLQLGLGITRDETTAKHYYSKACRLNP 332
Score = 43.5 bits (101), Expect = 7e-04
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 111 FKMGIKVLQQSKSQKQKEEAYLLFAKAADMGNLKAMEKMAD--ALLFGNFGVQNITAAIQ 168
+ +G + ++ EEA L+ AAD GN KA K L + + + A
Sbjct: 137 YNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKEPKELEKAFY 196
Query: 169 LYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSG 228
+ G+ ++Q ALG + YG G+ D AL + GN+ +Q L Y
Sbjct: 197 WHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNVYAQGNL-VEYYYK 255
Query: 229 INVLQNCEVALSYYKKVADY 248
+ C +++ K++ADY
Sbjct: 256 MKFFTKC---VAFSKRIADY 272
>gi|12751491 hypothetical protein LOC65260 [Homo sapiens]
Length = 231
Score = 49.3 bits (116), Expect = 1e-05
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 340 IGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGL---HGLGLLYFHGK----GVPLNYA 392
+G Y+ G + Q+ A + F MA K + H +GLL G+ G P +
Sbjct: 74 LGAHYVTGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQP-DLG 132
Query: 393 EALKYFQKAAEKGWPDAQFQLGFMYYSGS-GIWKDYKLAFKYFYLASQSGQPLAIYYLAK 451
+A Y+ +A + G+ + F L M+ G+ G KD LA KY A G A ++
Sbjct: 133 KARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASR 192
Query: 452 MYATGTGV 459
MY G GV
Sbjct: 193 MYKLGDGV 200
Score = 38.1 bits (87), Expect = 0.027
Identities = 36/130 (27%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 303 LGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAF---IGKMYLEG--NAAVPQNNAT 357
LG ++ G+ GL QD A FL A + ++A +G + +G N +
Sbjct: 74 LGAHYVTGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGK 133
Query: 358 AFKYFSMAASKGNAIGLHGLGLLYFHGK-GVPLNYAEALKYFQKAAEKGWPDAQFQLGFM 416
A Y++ A G L ++ G G P + A KY KA + G A M
Sbjct: 134 ARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASRM 193
Query: 417 YYSGSGIWKD 426
Y G G+ KD
Sbjct: 194 YKLGDGVDKD 203
>gi|56676397 ankyrin repeat domain 11 [Homo sapiens]
Length = 2663
Score = 37.7 bits (86), Expect = 0.036
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 14/110 (12%)
Query: 22 KAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRIKG 81
K E+ KR K+ N K E++ SN K +L EK + K+R+
Sbjct: 713 KDEKSLKRIKDTN----------KDISRSFREEKDRSNKAEKERSLKEKSPKEEKLRLYK 762
Query: 82 IQNKDILKRNKNHLQKQAEKNFTDEGDQLFKMGIKVLQQSKSQKQKEEAY 131
+ K K++K+ K +KN E D++ K K+ ++ K + +KE+ Y
Sbjct: 763 EERK---KKSKDRPSKLEKKNDLKE-DKISKEKEKIFKEDKEKLKKEKVY 808
>gi|14165274 golgi-associated microtubule-binding protein HOOK3
[Homo sapiens]
Length = 718
Score = 37.4 bits (85), Expect = 0.047
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 32/146 (21%)
Query: 22 KAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENL---LEKKKNQRKIR 78
+ EE K +++ + SV K+ H+ + ++N + K+ + LE + N ++
Sbjct: 523 QVEELQKSLQDQGSKAEDSVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLK 582
Query: 79 IKGIQN---------KDILKRNKNHLQK--------------------QAEKNFTDEGDQ 109
I+ +Q K + +R K +L+K QA KN E D+
Sbjct: 583 IEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDR 642
Query: 110 LFKMGIKVLQQSKSQKQKEEAYLLFA 135
LF K +++KSQ++ EE Y++ A
Sbjct: 643 LFHSLEKEYEKTKSQREMEEKYIVSA 668
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 35.8 bits (81), Expect = 0.14
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 17 TIKTIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRK 76
T K + K Q ++ T ++S ++KQ +H++E + + + K+ L K++
Sbjct: 800 TQKRCLTQNDLKMQTQQVNTLKMSEKQLKQENNHLMEMKMN---LEKQNAELRKERQDAD 856
Query: 77 IRIKGIQNKDILKRNKNHLQKQAEKNFTDEGDQLFKMGIKVLQQSKSQKQKE 128
++K +Q++ ++ + L K + +E ++ K+G K LQQ K + Q E
Sbjct: 857 GQMKELQDQLEAEQYFSTLYKTQVRELKEECEEKTKLG-KELQQKKQELQDE 907
>gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 601
Score = 35.4 bits (80), Expect = 0.18
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N KQ +LE + + I K E + +R +R
Sbjct: 98 TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKEELNTDLYHMKRSLRY 157
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ++ E
Sbjct: 158 FEEKSKDLAVRLQHSLQRKGE 178
>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 630
Score = 35.4 bits (80), Expect = 0.18
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N KQ +LE + + I K E + +R +R
Sbjct: 99 TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKEELNTDLYHMKRSLRY 158
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ++ E
Sbjct: 159 FEEKSKDLAVRLQHSLQRKGE 179
>gi|169208016 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 8E isoform 1 [Homo sapiens]
Length = 594
Score = 35.4 bits (80), Expect = 0.18
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N +Q +LE + + +I K E + +R +R
Sbjct: 91 TIKSLKQQKKQVEHQLEEEKKANNERQKAERVLEVQIQTLIIQKEELNTDLYHMERSLRY 150
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ + E
Sbjct: 151 FEEESKDLAVRLQHSLQCKGE 171
>gi|113425119 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 8E isoform 2 [Homo sapiens]
Length = 631
Score = 35.4 bits (80), Expect = 0.18
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N +Q +LE + + +I K E + +R +R
Sbjct: 99 TIKSLKQQKKQVEHQLEEEKKANNERQKAERVLEVQIQTLIIQKEELNTDLYHMERSLRY 158
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ + E
Sbjct: 159 FEEESKDLAVRLQHSLQCKGE 179
>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
[Homo sapiens]
Length = 580
Score = 35.4 bits (80), Expect = 0.18
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N KQ +LE + + I K E + +R +R
Sbjct: 99 TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKEELNTDLYHMKRSLRY 158
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ++ E
Sbjct: 159 FEEKSKDLAVRLQHSLQRKGE 179
>gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein 3
isoform 2 [Homo sapiens]
Length = 602
Score = 35.4 bits (80), Expect = 0.18
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N KQ +LE + + I K E + +R +R
Sbjct: 98 TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKEELNTDLYHMKRSLRY 157
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ++ E
Sbjct: 158 FEEKSKDLAVRLQHSLQRKGE 178
>gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein 3
isoform 1 [Homo sapiens]
Length = 632
Score = 35.4 bits (80), Expect = 0.18
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N KQ +LE + + I K E + +R +R
Sbjct: 99 TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQIQTLNIQKEELNTDLYHMKRSLRY 158
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ++ E
Sbjct: 159 FEEKSKDLAVRLQHSLQRKGE 179
>gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 602
Score = 35.4 bits (80), Expect = 0.18
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N KQ +LE + + I K E + +R +R
Sbjct: 98 TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQLQTLNIQKEELNTDLYHMKRSLRY 157
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ++ E
Sbjct: 158 FEEKSKDLAVRLQHSLQRKGE 178
>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 35.4 bits (80), Expect = 0.18
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N KQ +LE + + I K E + +R +R
Sbjct: 99 TIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQLQTLNIQKEELNTDLYHMKRSLRY 158
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ++ E
Sbjct: 159 FEEKSKDLAVRLQHSLQRKGE 179
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 35.4 bits (80), Expect = 0.18
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 31/209 (14%)
Query: 13 ILGVTIKTIKAEEHNKRQKERN-VTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKK 71
IL ++ +K + + Q R+ + T+VS E+ ++H L+ ++++ L +K
Sbjct: 1011 ILTQELEKLKRKHEGELQSVRDHLRTEVST-ELAGTVAHELQGVHQGEFGSEKKTALHEK 1069
Query: 72 KNQRKIRIKGIQNKDILKRNKNHLQKQAEKN---FTDEGDQLFKMG---------IKVLQ 119
+ +R++ Q + + K L Q +K DQ+ + ++VLQ
Sbjct: 1070 --EETLRLQSAQAQPFHQEEKESLSLQLQKKNHQVQQLKDQVLSLSHEIEECRSELEVLQ 1127
Query: 120 QSKSQKQKEEAYLLFAKAADMGNLKAMEK--MADAL--LFGNFGVQNITAAIQLYESLAK 175
Q + ++ +E A LL AD+ NL E+ + DAL L G FG + + AA+ L + +
Sbjct: 1128 QRRERENREGANLLSMLKADV-NLSHSERGALQDALRRLLGLFG-ETLRAAVTLRSRIGE 1185
Query: 176 E-GSCKAQNALGFLSSYGIGMEYDQAKAL 203
G C L G G+ A AL
Sbjct: 1186 RVGLC--------LDDAGAGLALSTAPAL 1206
>gi|189011544 ubiquitously transcribed tetratricopeptide repeat, X
chromosome [Homo sapiens]
Length = 1401
Score = 34.3 bits (77), Expect = 0.40
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 30/127 (23%)
Query: 360 KYFSMAASKG-NAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQF------- 411
+Y+S+ + NA L+GLGL+YFH + A+K FQ+ + D F
Sbjct: 118 RYYSLQSDYWKNAAFLYGLGLVYFHYNA----FQWAIKAFQEVL---YVDPSFCRAKEIH 170
Query: 412 -QLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAI------YYLAKMYATGTGVVRSCR 464
+LG M+ + DY+ + K+F LA P + +++A +Y T R
Sbjct: 171 LRLGLMFKVNT----DYESSLKHFQLALVDCNPCTLSNAEIQFHIAHLYET----QRKYH 222
Query: 465 TAVELYK 471
+A E Y+
Sbjct: 223 SAKEAYE 229
>gi|122937227 U2-associated SR140 protein [Homo sapiens]
Length = 1029
Score = 34.3 bits (77), Expect = 0.40
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 24 EEHNKRQKERNVT---TQVSVNEIKQ-YLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
EE N+ Q+E + TQ S +E Y + I E+ T S E EK+ R+I +
Sbjct: 790 EEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKLREIEL 849
Query: 80 KGIQNKDILKRNKNH------------------LQKQAEKNFTDEGDQLFKMGIKVLQQS 121
K ++ +D L+ K LQ++ EK E ++ K K+ +S
Sbjct: 850 KVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRS 909
Query: 122 KSQKQKEE 129
K +K+K+E
Sbjct: 910 KDKKEKDE 917
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 33.9 bits (76), Expect = 0.52
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 19 KTIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVI-NKRENLLEKKKNQRKI 77
K + EE R++E+ + ++ + + ++ + +E+ T + +I +++NL ++KKN +
Sbjct: 1790 KMPEEEERLGRKREQLIEKKMKLAQKRERWINSMEELTKNKMILYQKKNLAQEKKNLAQE 1849
Query: 78 RIKGIQNKDILKRNK--------------------NHLQKQAEKNFTDEGDQLFKMGIKV 117
+ K Q K+ L NK N + Q E+ T E + + K K+
Sbjct: 1850 KEKLAQRKENLLYNKERLTHSKKQLVQVKNKLGMFNKILAQVEEKLTQEKETVIKKKEKL 1909
Query: 118 LQQSKSQKQKEEA 130
+ K Q E++
Sbjct: 1910 AETEKKLVQVEDS 1922
>gi|75677376 coiled-coil domain containing 62 isoform b [Homo
sapiens]
Length = 684
Score = 33.5 bits (75), Expect = 0.67
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 37/191 (19%)
Query: 14 LGVTIKTIKAEEHNKRQKERNVTTQVSVNE--IKQYLSHILEQRTSSNVINKR------- 64
L T+ + A+ + +E+ +TT + + + I + ++HI + ++
Sbjct: 138 LSNTLVELSAQVGQLQAREQALTTMIKLKDKDIIEAVNHIADCSGKFKMLEHALRDAKMA 197
Query: 65 ENLLEKKKNQRKIRIKGIQNKDILKRNKNHLQKQAEKNFTDEGDQLFKMGIKVLQQSKS- 123
E + K+K K ++K LK N L++ + T+ +Q + I L+Q KS
Sbjct: 198 ETCIVKEKQDYKQKLKA------LKIEVNKLKEDLNEKTTENNEQ--REEIIRLKQEKSC 249
Query: 124 -----------QKQKEEAYLLFAKA------ADMGNLKAME-KMADALLFGNFGVQNITA 165
+K+K+E L AK+ +++ NL+ + K L F NF V+N
Sbjct: 250 LHDELLFTVEREKRKDEL-LNIAKSKQERTNSELHNLRQIYVKQQSDLQFLNFNVENSQE 308
Query: 166 AIQLYESLAKE 176
IQ+Y+S +E
Sbjct: 309 LIQMYDSKMEE 319
>gi|30348972 coiled-coil domain containing 62 isoform a [Homo
sapiens]
Length = 682
Score = 33.5 bits (75), Expect = 0.67
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 37/191 (19%)
Query: 14 LGVTIKTIKAEEHNKRQKERNVTTQVSVNE--IKQYLSHILEQRTSSNVINKR------- 64
L T+ + A+ + +E+ +TT + + + I + ++HI + ++
Sbjct: 138 LSNTLVELSAQVGQLQAREQALTTMIKLKDKDIIEAVNHIADCSGKFKMLEHALRDAKMA 197
Query: 65 ENLLEKKKNQRKIRIKGIQNKDILKRNKNHLQKQAEKNFTDEGDQLFKMGIKVLQQSKS- 123
E + K+K K ++K LK N L++ + T+ +Q + I L+Q KS
Sbjct: 198 ETCIVKEKQDYKQKLKA------LKIEVNKLKEDLNEKTTENNEQ--REEIIRLKQEKSC 249
Query: 124 -----------QKQKEEAYLLFAKA------ADMGNLKAME-KMADALLFGNFGVQNITA 165
+K+K+E L AK+ +++ NL+ + K L F NF V+N
Sbjct: 250 LHDELLFTVEREKRKDEL-LNIAKSKQERTNSELHNLRQIYVKQQSDLQFLNFNVENSQE 308
Query: 166 AIQLYESLAKE 176
IQ+Y+S +E
Sbjct: 309 LIQMYDSKMEE 319
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 33.5 bits (75), Expect = 0.67
Identities = 22/115 (19%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 22 KAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRIKG 81
+ E+ ++++E+ + ++ E+ + I ++ ++ K+E ++++ Q K ++
Sbjct: 195 RLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQ 254
Query: 82 IQNKDILKRNKNHLQKQAEKNFTDEGDQLFKMGIKVLQQSKSQKQKEEAYLLFAK 136
IQ + NK K+ EK D+ Q ++ L+ + +++ A LL K
Sbjct: 255 IQESQVTSHNKERRSKRDEK--LDKKSQ----AMEELKAEREKRKNRTAELLAKK 303
>gi|48255879 troponin T type 2, cardiac isoform 2 [Homo sapiens]
Length = 288
Score = 33.1 bits (74), Expect = 0.88
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Query: 22 KAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKK----NQRKI 77
+ EE N+R+ E + +++ + + +I +Q + KR+ EKKK +RK+
Sbjct: 159 REEEENRRKAEDEARKKKALSNMMHFGGYIQKQAQTERKSGKRQTEREKKKKILAERRKV 218
Query: 78 RIKGIQNKDILKRNKNHLQK-----QAEKNFTDEGDQLFKMGIKVLQQSKSQKQK 127
N+D L+ L + +AEK E + K I VL+ + QK
Sbjct: 219 LAIDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRINDNQK 273
>gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 33.1 bits (74), Expect = 0.88
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N +Q LE + + +I K E + +R +R
Sbjct: 91 TIKSLKQQKKQVEHQLEEEKKANNERQKAERELEVQIQTLIIQKEELNTDLYHMERSLRY 150
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ + E
Sbjct: 151 FEEESKDLAVRLQHSLQCKGE 171
>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 33.1 bits (74), Expect = 0.88
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N +Q LE + + +I K E + +R +R
Sbjct: 99 TIKSLKQQKKQVEHQLEEEKKANNERQKAERELEVQIQTLIIQKEELNTDLYHMERSLRY 158
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ + E
Sbjct: 159 FEEESKDLAVRLQHSLQCKGE 179
>gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 33.1 bits (74), Expect = 0.88
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 20 TIKAEEHNKRQKERNVTTQVSVNEIKQYLSHILEQRTSSNVINKRENLLEKKKNQRKIRI 79
TIK+ + K+Q E + + N +Q LE + + +I K E + +R +R
Sbjct: 91 TIKSLKQQKKQVEHQLEEEKKANNERQKAERELEVQIQTLIIQKEELNTDLYHMERSLRY 150
Query: 80 KGIQNKDILKRNKNHLQKQAE 100
++KD+ R ++ LQ + E
Sbjct: 151 FEEESKDLAVRLQHSLQCKGE 171
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,244,187
Number of Sequences: 37866
Number of extensions: 907298
Number of successful extensions: 2939
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 2758
Number of HSP's gapped (non-prelim): 178
length of query: 688
length of database: 18,247,518
effective HSP length: 109
effective length of query: 579
effective length of database: 14,120,124
effective search space: 8175551796
effective search space used: 8175551796
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.